RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 QRFPRQ96P65 431 aa10.87□□□□□ -0.67
PTCH1-206ENST00000421141 SH3GL1Q99961 368 aa10.87□□□□□ -0.67
PTCH1-206ENST00000421141 PNMA8BQ9ULN7 279 aaPredicted RBP10.87□□□□□ -0.67
PTCH1-206ENST00000421141 PCDHA11Q9Y5I1 949 aa10.87□□□□□ -0.67
PTCH1-206ENST00000421141 CPQQ9Y646 472 aa10.87□□□□□ -0.67
PTCH1-206ENST00000421141 ANKDD1BA6NHY2 528 aa10.87□□□□□ -0.67
PTCH1-206ENST00000421141 SLCO1B7G3V0H7 640 aa10.87□□□□□ -0.67
PTCH1-206ENST00000421141 INPPL1O15357 1258 aa10.87□□□□□ -0.67
PTCH1-206ENST00000421141 CSF2RAP15509 400 aa10.87□□□□□ -0.67
PTCH1-206ENST00000421141 GP5P40197 560 aa10.87□□□□□ -0.67
PTCH1-206ENST00000421141 SEL1L3Q68CR1 1132 aa10.87□□□□□ -0.67
PTCH1-206ENST00000421141 HHIPL1Q96JK4 782 aa10.87□□□□□ -0.67
PTCH1-206ENST00000421141 FERD3LQ96RJ6 166 aa10.87□□□□□ -0.67
PTCH1-206ENST00000421141 ZFYVE1Q9HBF4 777 aa10.87□□□□□ -0.67
PTCH1-206ENST00000421141 ETNK2Q9NVF9 386 aa10.87□□□□□ -0.67
PTCH1-206ENST00000421141 BTN3A1O00481 513 aa10.87□□□□□ -0.67
PTCH1-206ENST00000421141 ITGAVP06756 1048 aa10.87□□□□□ -0.67
PTCH1-206ENST00000421141 ENO3P13929 434 aaPredicted RBP10.87□□□□□ -0.67
PTCH1-206ENST00000421141 FMO1Q01740 532 aa10.87□□□□□ -0.67
PTCH1-206ENST00000421141 OR9Q1Q8NGQ5 310 aa10.87□□□□□ -0.67
PTCH1-206ENST00000421141 WFIKKN2Q8TEU8 576 aa10.87□□□□□ -0.67
PTCH1-206ENST00000421141 TIFAQ96CG3 184 aa10.87□□□□□ -0.67
PTCH1-206ENST00000421141 DTNBP1Q96EV8 351 aa10.87□□□□□ -0.67
PTCH1-206ENST00000421141 DNAJC1Q96KC8 554 aaKnown RBP10.87□□□□□ -0.67
PTCH1-206ENST00000421141 ACOX2Q99424 681 aa10.87□□□□□ -0.67
PTCH1-206ENST00000421141 POLG2Q9UHN1 485 aa10.87□□□□□ -0.67
PTCH1-206ENST00000421141 ENTPD4Q9Y227 616 aa10.87□□□□□ -0.67
PTCH1-206ENST00000421141 TM9SF1O15321 606 aa10.87□□□□□ -0.67
PTCH1-206ENST00000421141 CST3P01034 146 aaPredicted RBP10.87□□□□□ -0.67
PTCH1-206ENST00000421141 ASLP04424 464 aa10.87□□□□□ -0.67
PTCH1-206ENST00000421141 TLX1P31314 330 aaPredicted RBP10.87□□□□□ -0.67
PTCH1-206ENST00000421141 PRKAA2P54646 552 aa10.87□□□□□ -0.67
PTCH1-206ENST00000421141 RGS9BPQ6ZS82 235 aa10.87□□□□□ -0.67
PTCH1-206ENST00000421141 PLEKHA8Q96JA3 519 aa10.87□□□□□ -0.67
PTCH1-206ENST00000421141 EXOC2Q96KP1 924 aa10.87□□□□□ -0.67
PTCH1-206ENST00000421141 HNRNPABQ99729 332 aaKnown RBP10.87□□□□□ -0.67
PTCH1-206ENST00000421141 H2AFY2Q9P0M6 372 aaPredicted RBP10.87□□□□□ -0.67
PTCH1-206ENST00000421141 OPTCQ9UBM4 332 aa10.87□□□□□ -0.67
PTCH1-206ENST00000421141 SLC24A2Q9UI40 661 aa10.87□□□□□ -0.67
PTCH1-206ENST00000421141 GSAPA4D1B5 854 aa10.87□□□□□ -0.67
PTCH1-206ENST00000421141 PCCBP05166 539 aa10.87□□□□□ -0.67
PTCH1-206ENST00000421141 ADH5P11766 374 aa10.87□□□□□ -0.67
PTCH1-206ENST00000421141 NOMO3P69849 1222 aa10.87□□□□□ -0.67
PTCH1-206ENST00000421141 MMRN1Q13201 1228 aa10.87□□□□□ -0.67
PTCH1-206ENST00000421141 CYP51A1Q16850 503 aa10.87□□□□□ -0.67
PTCH1-206ENST00000421141 ATAD3BQ5T9A4 648 aa10.87□□□□□ -0.67
PTCH1-206ENST00000421141 ZCCHC8Q6NZY4 707 aaKnown RBP10.87□□□□□ -0.67
PTCH1-206ENST00000421141 DNAAF5Q86Y56 855 aa10.87□□□□□ -0.67
PTCH1-206ENST00000421141 LRRC39Q96DD0 335 aa10.87□□□□□ -0.67
PTCH1-206ENST00000421141 PAFAH2Q99487 392 aa10.87□□□□□ -0.67
PTCH1-206ENST00000421141 PARVBQ9HBI1 364 aa10.87□□□□□ -0.67
PTCH1-206ENST00000421141 PSME2Q9UL46 239 aa10.87□□□□□ -0.67
PTCH1-206ENST00000421141 TNPO3Q9Y5L0 923 aaKnown RBP10.87□□□□□ -0.67
PTCH1-206ENST00000421141 SGTAO43765 313 aa10.86□□□□□ -0.67
PTCH1-206ENST00000421141 AKT2P31751 481 aa10.86□□□□□ -0.67
PTCH1-206ENST00000421141 BLKP51451 505 aa10.86□□□□□ -0.67
PTCH1-206ENST00000421141 RGS1Q08116 209 aa10.86□□□□□ -0.67
PTCH1-206ENST00000421141 SPATA21Q7Z572 469 aa10.86□□□□□ -0.67
PTCH1-206ENST00000421141 BBS4Q96RK4 519 aa10.86□□□□□ -0.67
PTCH1-206ENST00000421141 ARHGEF4Q9NR80 690 aa10.86□□□□□ -0.67
PTCH1-206ENST00000421141 CNTN3Q9P232 1028 aa10.86□□□□□ -0.67
PTCH1-206ENST00000421141 ZFP37Q9Y6Q3 630 aaPredicted RBP10.86□□□□□ -0.67
PTCH1-206ENST00000421141 SCN4AP35499 1836 aa10.86□□□□□ -0.67
PTCH1-206ENST00000421141 LY75O60449 1722 aa10.86□□□□□ -0.67
PTCH1-206ENST00000421141 HNRNPRO43390 633 aaKnown RBP10.86□□□□□ -0.67
PTCH1-206ENST00000421141 CYP1A1P04798 512 aaPredicted RBP10.86□□□□□ -0.67
PTCH1-206ENST00000421141 ANXA5P08758 320 aa10.86□□□□□ -0.67
PTCH1-206ENST00000421141 TACR2P21452 398 aa10.86□□□□□ -0.67
PTCH1-206ENST00000421141 CENPAP49450 140 aa10.86□□□□□ -0.67
PTCH1-206ENST00000421141 DGKGP49619 791 aa10.86□□□□□ -0.67
PTCH1-206ENST00000421141 HSPA14Q0VDF9 509 aa10.86□□□□□ -0.67
PTCH1-206ENST00000421141 EOGTQ5NDL2 527 aa10.86□□□□□ -0.67
PTCH1-206ENST00000421141 RBFAQ8N0V3 343 aa10.86□□□□□ -0.67
PTCH1-206ENST00000421141 CAMKK1Q8N5S9 505 aa10.86□□□□□ -0.67
PTCH1-206ENST00000421141 STARD8Q92502 1023 aa10.86□□□□□ -0.67
PTCH1-206ENST00000421141 FAM111AQ96PZ2 611 aa10.86□□□□□ -0.67
PTCH1-206ENST00000421141 PJA2O43164 708 aa10.86□□□□□ -0.67
PTCH1-206ENST00000421141 CALCAP01258 141 aa10.86□□□□□ -0.67
PTCH1-206ENST00000421141 ERCC2P18074 760 aa10.86□□□□□ -0.67
PTCH1-206ENST00000421141 MTHFRP42898 656 aa10.86□□□□□ -0.67
PTCH1-206ENST00000421141 DPYSL3Q14195 570 aa10.86□□□□□ -0.67
PTCH1-206ENST00000421141 SLC51AQ86UW1 340 aa10.86□□□□□ -0.67
PTCH1-206ENST00000421141 PRCCQ92733 491 aaPredicted RBP10.86□□□□□ -0.67
PTCH1-206ENST00000421141 FEM1CQ96JP0 617 aa10.86□□□□□ -0.67
PTCH1-206ENST00000421141 RCOR3Q9P2K3 495 aaPredicted RBP10.86□□□□□ -0.67
PTCH1-206ENST00000421141 ARIH1Q9Y4X5 557 aaPredicted RBP10.86□□□□□ -0.67
PTCH1-206ENST00000421141 GTF2E2P29084 291 aaKnown RBP10.86□□□□□ -0.67
PTCH1-206ENST00000421141 NR6A1Q15406 480 aa10.86□□□□□ -0.67
PTCH1-206ENST00000421141 TMEM259Q4ZIN3 620 aa10.86□□□□□ -0.67
PTCH1-206ENST00000421141 TADA1Q96BN2 335 aa10.86□□□□□ -0.67
PTCH1-206ENST00000421141 PIH1D1Q9NWS0 290 aaKnown RBP10.86□□□□□ -0.67
PTCH1-206ENST00000421141 ARL2BPQ9Y2Y0 163 aa10.86□□□□□ -0.67
PTCH1-206ENST00000421141 ARAP2Q8WZ64 1704 aa10.86□□□□□ -0.67
PTCH1-206ENST00000421141 RGPD4Q7Z3J3 1758 aa10.86□□□□□ -0.67
PTCH1-206ENST00000421141 DOCK3Q8IZD9 2030 aa10.86□□□□□ -0.67
PTCH1-206ENST00000421141 MYBPHLA2RUH7 354 aa10.86□□□□□ -0.67
PTCH1-206ENST00000421141 ACSL4O60488 711 aa10.86□□□□□ -0.67
PTCH1-206ENST00000421141 RASGRP1O95267 797 aa10.86□□□□□ -0.67
PTCH1-206ENST00000421141 HSD17B3P37058 310 aa10.86□□□□□ -0.67
PTCH1-206ENST00000421141 MIIPQ5JXC2 388 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms