RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 CD48P09326 243 aa10.71□□□□□ -0.69
RFC1-203ENST00000418436 C5AR1P21730 350 aa10.71□□□□□ -0.69
RFC1-203ENST00000418436 SLC8A1P32418 973 aa10.71□□□□□ -0.69
RFC1-203ENST00000418436 SLC1A1P43005 524 aa10.71□□□□□ -0.69
RFC1-203ENST00000418436 SSR1P43307 286 aaKnown RBP10.71□□□□□ -0.69
RFC1-203ENST00000418436 SMCPP49901 116 aaPredicted RBP10.71□□□□□ -0.69
RFC1-203ENST00000418436 CDH6P55285 790 aa10.71□□□□□ -0.69
RFC1-203ENST00000418436 GSDMDP57764 484 aa10.71□□□□□ -0.69
RFC1-203ENST00000418436 SH3BP2P78314 561 aa10.71□□□□□ -0.69
RFC1-203ENST00000418436 DPYSL3Q14195 570 aa10.71□□□□□ -0.69
RFC1-203ENST00000418436 PDK2Q15119 407 aa10.71□□□□□ -0.69
RFC1-203ENST00000418436 INO80DQ53TQ3 878 aaPredicted RBP10.71□□□□□ -0.69
RFC1-203ENST00000418436 LRRC38Q5VT99 294 aa10.71□□□□□ -0.69
RFC1-203ENST00000418436 LPCAT2Q7L5N7 544 aa10.71□□□□□ -0.69
RFC1-203ENST00000418436 CACUL1Q86Y37 369 aa10.71□□□□□ -0.69
RFC1-203ENST00000418436 DCLK2Q8N568 766 aa10.71□□□□□ -0.69
RFC1-203ENST00000418436 PCDH20Q8N6Y1 951 aaKnown RBP10.71□□□□□ -0.69
RFC1-203ENST00000418436 OR8D1Q8WZ84 308 aa10.71□□□□□ -0.69
RFC1-203ENST00000418436 VOPP1Q96AW1 172 aa10.71□□□□□ -0.69
RFC1-203ENST00000418436 FAF2Q96CS3 445 aa10.71□□□□□ -0.69
RFC1-203ENST00000418436 TOE1Q96GM8 510 aaKnown RBP10.71□□□□□ -0.69
RFC1-203ENST00000418436 ZNF419Q96HQ0 510 aaPredicted RBP10.71□□□□□ -0.69
RFC1-203ENST00000418436 CELF6Q96J87 481 aaKnown RBP10.71□□□□□ -0.69
RFC1-203ENST00000418436 PDFQ9HBH1 243 aa10.71□□□□□ -0.69
RFC1-203ENST00000418436 ETNK2Q9NVF9 386 aa10.71□□□□□ -0.69
RFC1-203ENST00000418436 NCDNQ9UBB6 729 aa10.71□□□□□ -0.69
RFC1-203ENST00000418436 SALL4Q9UJQ4 1053 aa10.71□□□□□ -0.69
RFC1-203ENST00000418436 SARDHQ9UL12 918 aa10.71□□□□□ -0.69
RFC1-203ENST00000418436 MFHAS1Q9Y4C4 1052 aa10.71□□□□□ -0.69
RFC1-203ENST00000418436 ACTL7AQ9Y615 435 aa10.71□□□□□ -0.69
RFC1-203ENST00000418436 GPR179Q6PRD1 2367 aa10.7□□□□□ -0.7
RFC1-203ENST00000418436 NUMA1Q14980 2115 aa10.7□□□□□ -0.7
RFC1-203ENST00000418436 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.7□□□□□ -0.7
RFC1-203ENST00000418436 BCLAF3A2AJT9 711 aaKnown RBP10.7□□□□□ -0.7
RFC1-203ENST00000418436 ARHGAP42A6NI28 874 aa10.7□□□□□ -0.7
RFC1-203ENST00000418436 GOLGA6L6A8MZA4 724 aa10.7□□□□□ -0.7
RFC1-203ENST00000418436 ZNF487B1APH4 448 aa10.7□□□□□ -0.7
RFC1-203ENST00000418436 J3QL48 77 aa10.7□□□□□ -0.7
RFC1-203ENST00000418436 MID1O15344 667 aa10.7□□□□□ -0.7
RFC1-203ENST00000418436 BUB1O43683 1085 aa10.7□□□□□ -0.7
RFC1-203ENST00000418436 BUB1BO60566 1050 aaPredicted RBP10.7□□□□□ -0.7
RFC1-203ENST00000418436 PRAMEF11O60813 436 aa10.7□□□□□ -0.7
RFC1-203ENST00000418436 IPO7O95373 1038 aaKnown RBP10.7□□□□□ -0.7
RFC1-203ENST00000418436 F12P00748 615 aaPredicted RBP10.7□□□□□ -0.7
RFC1-203ENST00000418436 IL1BP01584 269 aa10.7□□□□□ -0.7
RFC1-203ENST00000418436 CTSLP07711 333 aa10.7□□□□□ -0.7
RFC1-203ENST00000418436 COMTP21964 271 aa10.7□□□□□ -0.7
RFC1-203ENST00000418436 KDELR1P24390 212 aa10.7□□□□□ -0.7
RFC1-203ENST00000418436 CHRNA3P32297 505 aa10.7□□□□□ -0.7
RFC1-203ENST00000418436 ACSL1P33121 698 aa10.7□□□□□ -0.7
RFC1-203ENST00000418436 PTGER3P43115 390 aa10.7□□□□□ -0.7
RFC1-203ENST00000418436 NOP2P46087 812 aaKnown RBP10.7□□□□□ -0.7
RFC1-203ENST00000418436 PAPOLAP51003 745 aaKnown RBP10.7□□□□□ -0.7
RFC1-203ENST00000418436 VAV2P52735 878 aa10.7□□□□□ -0.7
RFC1-203ENST00000418436 RPL6Q02878 288 aaKnown RBP10.7□□□□□ -0.7
RFC1-203ENST00000418436 SFSWAPQ12872 951 aaKnown RBP10.7□□□□□ -0.7
RFC1-203ENST00000418436 KRT81Q14533 505 aa10.7□□□□□ -0.7
RFC1-203ENST00000418436 TTC31Q49AM3 519 aaPredicted RBP10.7□□□□□ -0.7
RFC1-203ENST00000418436 CARD16Q5EG05 197 aa10.7□□□□□ -0.7
RFC1-203ENST00000418436 TMCO3Q6UWJ1 677 aa10.7□□□□□ -0.7
RFC1-203ENST00000418436 DPY19L3Q6ZPD9 716 aa10.7□□□□□ -0.7
RFC1-203ENST00000418436 DSG4Q86SJ6 1040 aa10.7□□□□□ -0.7
RFC1-203ENST00000418436 VSIG1Q86XK7 387 aa10.7□□□□□ -0.7
RFC1-203ENST00000418436 SLC41A1Q8IVJ1 513 aa10.7□□□□□ -0.7
RFC1-203ENST00000418436 TMEFF1Q8IYR6 380 aa10.7□□□□□ -0.7
RFC1-203ENST00000418436 AADATQ8N5Z0 425 aa10.7□□□□□ -0.7
RFC1-203ENST00000418436 KCTD6Q8NC69 237 aa10.7□□□□□ -0.7
RFC1-203ENST00000418436 CHST14Q8NCH0 376 aa10.7□□□□□ -0.7
RFC1-203ENST00000418436 ACRBPQ8NEB7 543 aa10.7□□□□□ -0.7
RFC1-203ENST00000418436 TMIEQ8NEW7 156 aa10.7□□□□□ -0.7
RFC1-203ENST00000418436 CADM4Q8NFZ8 388 aa10.7□□□□□ -0.7
RFC1-203ENST00000418436 PCDH19Q8TAB3 1148 aa10.7□□□□□ -0.7
RFC1-203ENST00000418436 RAPGEF5Q92565 580 aa10.7□□□□□ -0.7
RFC1-203ENST00000418436 CALR3Q96L12 384 aaKnown RBP10.7□□□□□ -0.7
RFC1-203ENST00000418436 CCDC114Q96M63 670 aa10.7□□□□□ -0.7
RFC1-203ENST00000418436 ZNF670Q9BS34 389 aa10.7□□□□□ -0.7
RFC1-203ENST00000418436 LACRTQ9GZZ8 138 aa10.7□□□□□ -0.7
RFC1-203ENST00000418436 PCED1AQ9H1Q7 454 aa10.7□□□□□ -0.7
RFC1-203ENST00000418436 ARRDC1-AS1Q9H2J1 176 aa10.7□□□□□ -0.7
RFC1-203ENST00000418436 TNKS2Q9H2K2 1166 aa10.7□□□□□ -0.7
RFC1-203ENST00000418436 GRPEL1Q9HAV7 217 aa10.7□□□□□ -0.7
RFC1-203ENST00000418436 SGK2Q9HBY8 427 aa10.7□□□□□ -0.7
RFC1-203ENST00000418436 FBXL12Q9NXK8 326 aa10.7□□□□□ -0.7
RFC1-203ENST00000418436 SERGEFQ9UGK8 458 aa10.7□□□□□ -0.7
RFC1-203ENST00000418436 FZD4Q9ULV1 537 aa10.7□□□□□ -0.7
RFC1-203ENST00000418436 ALG6Q9Y672 507 aa10.7□□□□□ -0.7
RFC1-203ENST00000418436 ZNF292O60281 2723 aa10.7□□□□□ -0.7
RFC1-203ENST00000418436 PIEZO1Q92508 2521 aa10.69□□□□□ -0.7
RFC1-203ENST00000418436 SDK1Q7Z5N4 2213 aa10.69□□□□□ -0.7
RFC1-203ENST00000418436 SHROOM3Q8TF72 1996 aa10.69□□□□□ -0.7
RFC1-203ENST00000418436 A0A1W2PP55 124 aa10.69□□□□□ -0.7
RFC1-203ENST00000418436 C3orf70A6NLC5 250 aaPredicted RBP10.69□□□□□ -0.7
RFC1-203ENST00000418436 J3KR12 359 aa10.69□□□□□ -0.7
RFC1-203ENST00000418436 RNF103O00237 685 aa10.69□□□□□ -0.7
RFC1-203ENST00000418436 NDUFS2O75306 463 aa10.69□□□□□ -0.7
RFC1-203ENST00000418436 TMCC1O94876 653 aa10.69□□□□□ -0.7
RFC1-203ENST00000418436 GSRP00390 522 aa10.69□□□□□ -0.7
RFC1-203ENST00000418436 DRD3P35462 400 aa10.69□□□□□ -0.7
RFC1-203ENST00000418436 GJC1P36383 396 aa10.69□□□□□ -0.7
RFC1-203ENST00000418436 RECQLP46063 649 aaPredicted RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms