RNA–Protein interactions for RNA: ENST00000418375.1

TMEM248-203, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 545 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-203ENST00000418375 MCF2LO15068 1137 aa13.58□□□□□ -0.24
TMEM248-203ENST00000418375 KRT86O43790 486 aa13.58□□□□□ -0.24
TMEM248-203ENST00000418375 PRAMEF11O60813 436 aa13.58□□□□□ -0.24
TMEM248-203ENST00000418375 TMCC1O94876 653 aa13.58□□□□□ -0.24
TMEM248-203ENST00000418375 CD160O95971 181 aa13.58□□□□□ -0.24
TMEM248-203ENST00000418375 ADH1BP00325 375 aa13.58□□□□□ -0.24
TMEM248-203ENST00000418375 IL1BP01584 269 aa13.58□□□□□ -0.24
TMEM248-203ENST00000418375 CCDC175P0C221 793 aa13.58□□□□□ -0.24
TMEM248-203ENST00000418375 CD6P30203 668 aa13.58□□□□□ -0.24
TMEM248-203ENST00000418375 PSMD8P48556 350 aa13.58□□□□□ -0.24
TMEM248-203ENST00000418375 DNA2P51530 1060 aa13.58□□□□□ -0.24
TMEM248-203ENST00000418375 TPMTP51580 245 aa13.58□□□□□ -0.24
TMEM248-203ENST00000418375 CCZ1BP86790 482 aa13.58□□□□□ -0.24
TMEM248-203ENST00000418375 CCZ1P86791 482 aaPredicted RBP13.58□□□□□ -0.24
TMEM248-203ENST00000418375 LEKR1Q6ZMV7 388 aa13.58□□□□□ -0.24
TMEM248-203ENST00000418375 LRRC49Q8IUZ0 686 aa13.58□□□□□ -0.24
TMEM248-203ENST00000418375 PLPP6Q8IY26 295 aa13.58□□□□□ -0.24
TMEM248-203ENST00000418375 TMEFF1Q8IYR6 380 aa13.58□□□□□ -0.24
TMEM248-203ENST00000418375 SYCE1Q8N0S2 351 aa13.58□□□□□ -0.24
TMEM248-203ENST00000418375 RNF10Q8N5U6 811 aaKnown RBP13.58□□□□□ -0.24
TMEM248-203ENST00000418375 FRMD1Q8N878 549 aa13.58□□□□□ -0.24
TMEM248-203ENST00000418375 OR2A12Q8NGT7 310 aa13.58□□□□□ -0.24
TMEM248-203ENST00000418375 PCDH19Q8TAB3 1148 aa13.58□□□□□ -0.24
TMEM248-203ENST00000418375 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.58□□□□□ -0.24
TMEM248-203ENST00000418375 GANCQ8TET4 914 aa13.58□□□□□ -0.24
TMEM248-203ENST00000418375 PIGKQ92643 395 aa13.58□□□□□ -0.24
TMEM248-203ENST00000418375 CNTNAP3BQ96NU0 1288 aa13.58□□□□□ -0.24
TMEM248-203ENST00000418375 RNF157Q96PX1 679 aa13.58□□□□□ -0.24
TMEM248-203ENST00000418375 FAM129BQ96TA1 746 aa13.58□□□□□ -0.24
TMEM248-203ENST00000418375 CNTNAP3Q9BZ76 1288 aa13.58□□□□□ -0.24
TMEM248-203ENST00000418375 TNKS2Q9H2K2 1166 aa13.58□□□□□ -0.24
TMEM248-203ENST00000418375 PABPC3Q9H361 631 aaKnown RBP13.58□□□□□ -0.24
TMEM248-203ENST00000418375 GOLPH3Q9H4A6 298 aa13.58□□□□□ -0.24
TMEM248-203ENST00000418375 ETNK2Q9NVF9 386 aa13.58□□□□□ -0.24
TMEM248-203ENST00000418375 IPO11Q9UI26 975 aaKnown RBP13.58□□□□□ -0.24
TMEM248-203ENST00000418375 ACTL7AQ9Y615 435 aa13.58□□□□□ -0.24
TMEM248-203ENST00000418375 EML5Q05BV3 1969 aa13.58□□□□□ -0.24
TMEM248-203ENST00000418375 CKAP5Q14008 2032 aa13.57□□□□□ -0.24
TMEM248-203ENST00000418375 LNP1A1A4G5 178 aa13.57□□□□□ -0.24
TMEM248-203ENST00000418375 GRID2IPA4D2P6 1211 aa13.57□□□□□ -0.24
TMEM248-203ENST00000418375 C4orf47A7E2U8 309 aa13.57□□□□□ -0.24
TMEM248-203ENST00000418375 PATE3B3GLJ2 98 aa13.57□□□□□ -0.24
TMEM248-203ENST00000418375 J3KR12 359 aa13.57□□□□□ -0.24
TMEM248-203ENST00000418375 MID1O15344 667 aa13.57□□□□□ -0.24
TMEM248-203ENST00000418375 NDUFS2O75306 463 aa13.57□□□□□ -0.24
TMEM248-203ENST00000418375 IGLV3-19P01714 112 aa13.57□□□□□ -0.24
TMEM248-203ENST00000418375 PRNPP04156 253 aa13.57□□□□□ -0.24
TMEM248-203ENST00000418375 ZFXP17010 805 aaPredicted RBP13.57□□□□□ -0.24
TMEM248-203ENST00000418375 C5AR1P21730 350 aa13.57□□□□□ -0.24
TMEM248-203ENST00000418375 CHRNA3P32297 505 aa13.57□□□□□ -0.24
TMEM248-203ENST00000418375 SLC8A1P32418 973 aa13.57□□□□□ -0.24
TMEM248-203ENST00000418375 RHOAP61586 193 aa13.57□□□□□ -0.24
TMEM248-203ENST00000418375 SNRPD1P62314 119 aaKnown RBP13.57□□□□□ -0.24
TMEM248-203ENST00000418375 IL10RBQ08334 325 aa13.57□□□□□ -0.24
TMEM248-203ENST00000418375 RFTN1Q14699 578 aaPredicted RBP13.57□□□□□ -0.24
TMEM248-203ENST00000418375 PAFAH1B3Q15102 231 aaKnown RBP13.57□□□□□ -0.24
TMEM248-203ENST00000418375 CARD16Q5EG05 197 aa13.57□□□□□ -0.24
TMEM248-203ENST00000418375 SPDYCQ5MJ68 293 aa13.57□□□□□ -0.24
TMEM248-203ENST00000418375 NCBP2-AS2Q69YL0 99 aa13.57□□□□□ -0.24
TMEM248-203ENST00000418375 USP30Q70CQ3 517 aa13.57□□□□□ -0.24
TMEM248-203ENST00000418375 ARMCX6Q7L4S7 300 aa13.57□□□□□ -0.24
TMEM248-203ENST00000418375 KATNAL2Q8IYT4 538 aa13.57□□□□□ -0.24
TMEM248-203ENST00000418375 RYBPQ8N488 228 aaPredicted RBP13.57□□□□□ -0.24
TMEM248-203ENST00000418375 ATPAF2Q8N5M1 289 aa13.57□□□□□ -0.24
TMEM248-203ENST00000418375 RNF25Q96BH1 459 aaPredicted RBP13.57□□□□□ -0.24
TMEM248-203ENST00000418375 RBM41Q96IZ5 413 aaKnown RBP13.57□□□□□ -0.24
TMEM248-203ENST00000418375 OMDQ99983 421 aa13.57□□□□□ -0.24
TMEM248-203ENST00000418375 TM6SF2Q9BZW4 377 aa13.57□□□□□ -0.24
TMEM248-203ENST00000418375 PDFQ9HBH1 243 aa13.57□□□□□ -0.24
TMEM248-203ENST00000418375 FBXL12Q9NXK8 326 aa13.57□□□□□ -0.24
TMEM248-203ENST00000418375 TRIM10Q9UDY6 481 aa13.57□□□□□ -0.24
TMEM248-203ENST00000418375 MBD1Q9UIS9 605 aaPredicted RBP13.57□□□□□ -0.24
TMEM248-203ENST00000418375 PPM1HQ9ULR3 514 aa13.57□□□□□ -0.24
TMEM248-203ENST00000418375 MFHAS1Q9Y4C4 1052 aa13.57□□□□□ -0.24
TMEM248-203ENST00000418375 CCDC66A2RUB6 948 aa13.56□□□□□ -0.24
TMEM248-203ENST00000418375 C3orf70A6NLC5 250 aaPredicted RBP13.56□□□□□ -0.24
TMEM248-203ENST00000418375 APOL1O14791 398 aa13.56□□□□□ -0.24
TMEM248-203ENST00000418375 MFSD11O43934 449 aa13.56□□□□□ -0.24
TMEM248-203ENST00000418375 ZNF821O75541 412 aaPredicted RBP13.56□□□□□ -0.24
TMEM248-203ENST00000418375 PALMO75781 387 aa13.56□□□□□ -0.24
TMEM248-203ENST00000418375 ZRANB2O95218 330 aaKnown RBP eCLIP13.56□□□□□ -0.24
TMEM248-203ENST00000418375 IGSF6O95976 241 aa13.56□□□□□ -0.24
TMEM248-203ENST00000418375 GSRP00390 522 aa13.56□□□□□ -0.24
TMEM248-203ENST00000418375 CTNNA1P35221 906 aaKnown RBP13.56□□□□□ -0.24
TMEM248-203ENST00000418375 PTGER3P43115 390 aa13.56□□□□□ -0.24
TMEM248-203ENST00000418375 CCNHP51946 323 aaPredicted RBP13.56□□□□□ -0.24
TMEM248-203ENST00000418375 RPL6Q02878 288 aaKnown RBP13.56□□□□□ -0.24
TMEM248-203ENST00000418375 TMCO4Q5TGY1 634 aa13.56□□□□□ -0.24
TMEM248-203ENST00000418375 DPY19L3Q6ZPD9 716 aa13.56□□□□□ -0.24
TMEM248-203ENST00000418375 PEX26Q7Z412 305 aa13.56□□□□□ -0.24
TMEM248-203ENST00000418375 RFX6Q8HWS3 928 aa13.56□□□□□ -0.24
TMEM248-203ENST00000418375 SYT12Q8IV01 421 aa13.56□□□□□ -0.24
TMEM248-203ENST00000418375 RCOR2Q8IZ40 523 aa13.56□□□□□ -0.24
TMEM248-203ENST00000418375 PQLC3Q8N755 202 aa13.56□□□□□ -0.24
TMEM248-203ENST00000418375 LRRC57Q8N9N7 239 aa13.56□□□□□ -0.24
TMEM248-203ENST00000418375 NETO2Q8NC67 525 aa13.56□□□□□ -0.24
TMEM248-203ENST00000418375 TMIEQ8NEW7 156 aa13.56□□□□□ -0.24
TMEM248-203ENST00000418375 OR2AP1Q8NGE2 309 aa13.56□□□□□ -0.24
TMEM248-203ENST00000418375 PIP4K2CQ8TBX8 421 aa13.56□□□□□ -0.24
TMEM248-203ENST00000418375 NSMCE1Q8WV22 266 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms