RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 EIF3MQ7L2H7 374 aaKnown RBP12.18□□□□□ -0.46
UBR4-205ENST00000417040 ECHDC2Q86YB7 292 aa12.18□□□□□ -0.46
UBR4-205ENST00000417040 CIB1Q99828 191 aa12.18□□□□□ -0.46
UBR4-205ENST00000417040 TOR3AQ9H497 397 aa12.18□□□□□ -0.46
UBR4-205ENST00000417040 EFR3BQ9Y2G0 817 aa12.18□□□□□ -0.46
UBR4-205ENST00000417040 NCANO14594 1321 aa12.18□□□□□ -0.46
UBR4-205ENST00000417040 WNT7AO00755 349 aa12.17□□□□□ -0.46
UBR4-205ENST00000417040 DNAJB2P25686 324 aa12.17□□□□□ -0.46
UBR4-205ENST00000417040 GPR15P49685 360 aa12.17□□□□□ -0.46
UBR4-205ENST00000417040 AKR1D1P51857 326 aa12.17□□□□□ -0.46
UBR4-205ENST00000417040 INO80DQ53TQ3 878 aaPredicted RBP12.17□□□□□ -0.46
UBR4-205ENST00000417040 IQSEC1Q6DN90 963 aa12.17□□□□□ -0.46
UBR4-205ENST00000417040 MTSS1LQ765P7 747 aa12.17□□□□□ -0.46
UBR4-205ENST00000417040 CMC1Q7Z7K0 106 aa12.17□□□□□ -0.46
UBR4-205ENST00000417040 OOSP2Q86WS3 158 aa12.17□□□□□ -0.46
UBR4-205ENST00000417040 PSTKQ8IV42 348 aaKnown RBP12.17□□□□□ -0.46
UBR4-205ENST00000417040 PROX1Q92786 737 aa12.17□□□□□ -0.46
UBR4-205ENST00000417040 CERS2Q96G23 380 aa12.17□□□□□ -0.46
UBR4-205ENST00000417040 COPS4Q9BT78 406 aa12.17□□□□□ -0.46
UBR4-205ENST00000417040 BCLAF3A2AJT9 711 aaKnown RBP12.17□□□□□ -0.46
UBR4-205ENST00000417040 G3V2T6 193 aa12.17□□□□□ -0.46
UBR4-205ENST00000417040 CD3EAPO15446 510 aaKnown RBP12.17□□□□□ -0.46
UBR4-205ENST00000417040 ANXA6P08133 673 aa12.17□□□□□ -0.46
UBR4-205ENST00000417040 EPORP19235 508 aa12.17□□□□□ -0.46
UBR4-205ENST00000417040 PPP2R1BP30154 601 aa12.17□□□□□ -0.46
UBR4-205ENST00000417040 PTPN5P54829 565 aa12.17□□□□□ -0.46
UBR4-205ENST00000417040 RPL7AP62424 266 aaKnown RBP12.17□□□□□ -0.46
UBR4-205ENST00000417040 SLC1A5Q15758 541 aa12.17□□□□□ -0.46
UBR4-205ENST00000417040 GSTA3Q16772 222 aa12.17□□□□□ -0.46
UBR4-205ENST00000417040 PARP6Q2NL67 630 aa12.17□□□□□ -0.46
UBR4-205ENST00000417040 NUDT18Q6ZVK8 323 aa12.17□□□□□ -0.46
UBR4-205ENST00000417040 RNF44Q7L0R7 432 aa12.17□□□□□ -0.46
UBR4-205ENST00000417040 LGI2Q8N0V4 545 aa12.17□□□□□ -0.46
UBR4-205ENST00000417040 NAT14Q8WUY8 206 aa12.17□□□□□ -0.46
UBR4-205ENST00000417040 USP7Q93009 1102 aa12.17□□□□□ -0.46
UBR4-205ENST00000417040 CYP3A43Q9HB55 503 aa12.17□□□□□ -0.46
UBR4-205ENST00000417040 RPRD1BQ9NQG5 326 aaKnown RBP12.17□□□□□ -0.46
UBR4-205ENST00000417040 SMPD4Q9NXE4 827 aa12.17□□□□□ -0.46
UBR4-205ENST00000417040 OPTCQ9UBM4 332 aa12.17□□□□□ -0.46
UBR4-205ENST00000417040 RAMP2O60895 175 aa12.17□□□□□ -0.46
UBR4-205ENST00000417040 NADKO95544 446 aaPredicted RBP12.17□□□□□ -0.46
UBR4-205ENST00000417040 ATP5BP06576 529 aaKnown RBP12.17□□□□□ -0.46
UBR4-205ENST00000417040 MPSTP25325 297 aa12.17□□□□□ -0.46
UBR4-205ENST00000417040 ALDH7A1P49419 539 aaKnown RBP12.17□□□□□ -0.46
UBR4-205ENST00000417040 RPL38P63173 70 aaKnown RBP12.17□□□□□ -0.46
UBR4-205ENST00000417040 ECM1Q16610 540 aa12.17□□□□□ -0.46
UBR4-205ENST00000417040 PAGE2BQ5JRK9 111 aa12.17□□□□□ -0.46
UBR4-205ENST00000417040 ZNF484Q5JVG2 852 aa12.17□□□□□ -0.46
UBR4-205ENST00000417040 DENND5AQ6IQ26 1287 aa12.17□□□□□ -0.46
UBR4-205ENST00000417040 PURBQ96QR8 312 aaKnown RBP12.17□□□□□ -0.46
UBR4-205ENST00000417040 SYT15Q9BQS2 421 aa12.17□□□□□ -0.46
UBR4-205ENST00000417040 GGA2Q9UJY4 613 aa12.17□□□□□ -0.46
UBR4-205ENST00000417040 NCAM2O15394 837 aa12.17□□□□□ -0.46
UBR4-205ENST00000417040 MT-ND1P03886 318 aa12.17□□□□□ -0.46
UBR4-205ENST00000417040 MMP13P45452 471 aa12.17□□□□□ -0.46
UBR4-205ENST00000417040 FMO1Q01740 532 aa12.17□□□□□ -0.46
UBR4-205ENST00000417040 LGALS3BPQ08380 585 aa12.17□□□□□ -0.46
UBR4-205ENST00000417040 GALNT18Q6P9A2 607 aa12.17□□□□□ -0.46
UBR4-205ENST00000417040 INTS5Q6P9B9 1019 aaKnown RBP12.17□□□□□ -0.46
UBR4-205ENST00000417040 LRRC49Q8IUZ0 686 aa12.17□□□□□ -0.46
UBR4-205ENST00000417040 GMCL1P1Q8NEA9 526 aa12.17□□□□□ -0.46
UBR4-205ENST00000417040 DNAJB3Q8WWF6 145 aa12.17□□□□□ -0.46
UBR4-205ENST00000417040 OSBPL11Q9BXB4 747 aa12.17□□□□□ -0.46
UBR4-205ENST00000417040 BCL2L14Q9BZR8 327 aa12.17□□□□□ -0.46
UBR4-205ENST00000417040 EDF1O60869 148 aaKnown RBP12.17□□□□□ -0.46
UBR4-205ENST00000417040 SLC25A27O95847 323 aa12.17□□□□□ -0.46
UBR4-205ENST00000417040 GCNT1Q02742 428 aa12.17□□□□□ -0.46
UBR4-205ENST00000417040 RFX4Q33E94 735 aa12.17□□□□□ -0.46
UBR4-205ENST00000417040 SWT1Q5T5J6 900 aaKnown RBP12.17□□□□□ -0.46
UBR4-205ENST00000417040 RD3Q7Z3Z2 195 aa12.17□□□□□ -0.46
UBR4-205ENST00000417040 OR52K2Q8NGK3 314 aa12.17□□□□□ -0.46
UBR4-205ENST00000417040 KLHL32Q96NJ5 620 aa12.17□□□□□ -0.46
UBR4-205ENST00000417040 QKIQ96PU8 341 aaKnown RBP eCLIP12.17□□□□□ -0.466e-6■■■■□ 20.5
UBR4-205ENST00000417040 TMEM138Q9NPI0 162 aa12.17□□□□□ -0.46
UBR4-205ENST00000417040 SNX15Q9NRS6 342 aa12.17□□□□□ -0.46
UBR4-205ENST00000417040 TCRBV7S2A1N4TA0A589 114 aa12.16□□□□□ -0.46
UBR4-205ENST00000417040 SERPINF2P08697 491 aa12.16□□□□□ -0.46
UBR4-205ENST00000417040 NUDT17P0C025 328 aa12.16□□□□□ -0.46
UBR4-205ENST00000417040 PIRTP0C851 137 aa12.16□□□□□ -0.46
UBR4-205ENST00000417040 HGFP14210 728 aa12.16□□□□□ -0.46
UBR4-205ENST00000417040 TNFSF9P41273 254 aa12.16□□□□□ -0.46
UBR4-205ENST00000417040 LHX1P48742 406 aa12.16□□□□□ -0.46
UBR4-205ENST00000417040 SPIBQ01892 262 aa12.16□□□□□ -0.46
UBR4-205ENST00000417040 SEMA5AQ13591 1074 aa12.16□□□□□ -0.46
UBR4-205ENST00000417040 LPIN1Q14693 890 aa12.16□□□□□ -0.46
UBR4-205ENST00000417040 CYP20A1Q6UW02 462 aa12.16□□□□□ -0.46
UBR4-205ENST00000417040 FAM9CQ8IZT9 166 aa12.16□□□□□ -0.46
UBR4-205ENST00000417040 FITM2Q8N6M3 262 aa12.16□□□□□ -0.46
UBR4-205ENST00000417040 DNAJC1Q96KC8 554 aaKnown RBP12.16□□□□□ -0.46
UBR4-205ENST00000417040 BBS4Q96RK4 519 aa12.16□□□□□ -0.46
UBR4-205ENST00000417040 TCF12Q99081 682 aa12.16□□□□□ -0.46
UBR4-205ENST00000417040 ABCB9Q9NP78 766 aa12.16□□□□□ -0.46
UBR4-205ENST00000417040 CLN6Q9NWW5 311 aa12.16□□□□□ -0.46
UBR4-205ENST00000417040 LNPEPQ9UIQ6 1025 aa12.16□□□□□ -0.46
UBR4-205ENST00000417040 ADGRB3O60242 1522 aa12.16□□□□□ -0.46
UBR4-205ENST00000417040 UMODL1Q5DID0 1318 aa12.16□□□□□ -0.46
UBR4-205ENST00000417040 FAM149AA5PLN7 773 aa12.16□□□□□ -0.46
UBR4-205ENST00000417040 LIN7AO14910 233 aaPredicted RBP12.16□□□□□ -0.46
UBR4-205ENST00000417040 WFS1O76024 890 aa12.16□□□□□ -0.46
UBR4-205ENST00000417040 ITGA2BP08514 1039 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms