RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 FKTNO75072 461 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 NIPSNAP2O75323 286 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 AVILO75366 819 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 TRIM3O75382 744 aaPredicted RBP3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 SCGB2A1O75556 95 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 RHBDL1O75783 438 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 PRAMEF1O95521 474 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 DDAH2O95865 285 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 CHEK2O96017 543 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 AHSGP02765 367 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 OPN1LWP04000 364 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 GNAI2P04899 355 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 ZFYP08048 801 aaPredicted RBP3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 GNAI3P08754 354 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 C1SP09871 688 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 FAM90A15PP0C7V4 464 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 FAM90A14PP0C7W9 464 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 TROVE2P10155 538 aaKnown RBP eCLIP3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 MAPTP10636 758 aaKnown RBP3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 PRKAR1AP10644 381 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 CLUP10909 449 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 PKMP14618 531 aaKnown RBP3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 CPB1P15086 417 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 GCFC2P16383 781 aaKnown RBP3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 ZFXP17010 805 aaPredicted RBP3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 EPORP19235 508 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 ENDOUP21128 410 aaKnown RBP3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 GPTP24298 496 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 NR2F2P24468 414 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 KLRK1P26718 216 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 MST1P26927 711 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 ECHS1P30084 290 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 ICAM3P32942 547 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 NTF4P34130 210 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 CAPGP40121 348 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 OR1G1P47890 313 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 STARP49675 285 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 HK2P52789 917 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 NAGLUP54802 743 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 PLTPP55058 493 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 EIF3EP60228 445 aaKnown RBP3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 ACTR3P61158 418 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 UFM1P61960 85 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 RPS8P62241 208 aaKnown RBP3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 GNAI1P63096 354 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 CSNK2BP67870 215 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 RPP38P78345 283 aaKnown RBP3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 BASP1P80723 227 aaKnown RBP3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 PPP3CAQ08209 521 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 NIPAL4Q0D2K0 466 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 OVGP1Q12889 678 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 TRAF1Q13077 416 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 PDCLQ13371 301 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 SNW1Q13573 536 aaKnown RBP3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 BOP1Q14137 746 aaKnown RBP3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 RAB3GAP1Q15042 981 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 RRS1Q15050 365 aaKnown RBP3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 TAZQ16635 292 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 TPD52L1Q16890 204 aaPredicted RBP3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 FBLN7Q53RD9 439 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 PLAC9Q5JTB6 97 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 ZNF569Q5MCW4 686 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 LCE2AQ5TA79 106 aaPredicted RBP3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 GKAP1Q5VSY0 366 aaPredicted RBP3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 FAM171A1Q5VUB5 890 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 SLFN12LQ6IEE8 588 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 OR7E24Q6IFN5 339 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 GPAT2Q6NUI2 795 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 MIS18BP1Q6P0N0 1132 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 LETMD1Q6P1Q0 360 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 GALNT18Q6P9A2 607 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 OGFOD3Q6PK18 319 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 ARSKQ6UWY0 536 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 PARS2Q7L3T8 475 aaKnown RBP3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 GSTA5Q7RTV2 222 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 TMPRSS7Q7RTY8 843 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 KANSL1Q7Z3B3 1105 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 RAB44Q7Z6P3 723 aaPredicted RBP3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 KBTBD6Q86V97 674 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 ERO1BQ86YB8 467 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 FAM90A1Q86YD7 464 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 ZNF573Q86YE8 665 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 NKAIN4Q8IVV8 208 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 MFN1Q8IWA4 741 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 CD302Q8IX05 232 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 RBM12BQ8IXT5 1001 aaKnown RBP3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 EFCAB13Q8IY85 973 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 UNC5BQ8IZJ1 945 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 SLC7A5P1Q8MH63 180 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 SYCE1Q8N0S2 351 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 TCAIMQ8N3R3 496 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 DNAJC5GQ8N7S2 189 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 MB21D1Q8N884 522 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 TC2NQ8N9U0 490 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 KDM1BQ8NB78 822 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 KCNH5Q8NCM2 988 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 TSPAN14Q8NG11 270 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 OR2I1PQ8NGU4 316 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 OR56A3Q8NH54 315 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 AKR7LQ8NHP1 331 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms