RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 KCNT1Q5JUK3 1230 aa15.09■□□□□ 0.01
LIMS4-201ENST00000413601 LAYNQ6UX15 382 aa15.09■□□□□ 0.01
LIMS4-201ENST00000413601 NETO2Q8NC67 525 aa15.09■□□□□ 0.01
LIMS4-201ENST00000413601 ISG20Q96AZ6 181 aaKnown RBP15.09■□□□□ 0.01
LIMS4-201ENST00000413601 EIF3CQ99613 913 aaKnown RBP15.09■□□□□ 0.01
LIMS4-201ENST00000413601 HEPHQ9BQS7 1158 aa15.09■□□□□ 0.01
LIMS4-201ENST00000413601 ZDHHC6Q9H6R6 413 aa15.09■□□□□ 0.01
LIMS4-201ENST00000413601 ABHD10Q9NUJ1 306 aa15.09■□□□□ 0.01
LIMS4-201ENST00000413601 ZNHIT6Q9NWK9 470 aaKnown RBP15.09■□□□□ 0.01
LIMS4-201ENST00000413601 IP6K2Q9UHH9 426 aa15.09■□□□□ 0.01
LIMS4-201ENST00000413601 ZSCAN5CA6NGD5 496 aaPredicted RBP15.08■□□□□ 0
LIMS4-201ENST00000413601 GIPC1O14908 333 aa15.08■□□□□ 0
LIMS4-201ENST00000413601 DAPK3O43293 454 aa15.08■□□□□ 0
LIMS4-201ENST00000413601 MFAP3LO75121 409 aa15.08■□□□□ 0
LIMS4-201ENST00000413601 KCNK5O95279 499 aa15.08■□□□□ 0
LIMS4-201ENST00000413601 TAS2R38P59533 333 aa15.08■□□□□ 0
LIMS4-201ENST00000413601 TEAD4Q15561 434 aa15.08■□□□□ 0
LIMS4-201ENST00000413601 SMTNL2Q2TAL5 461 aa15.08■□□□□ 0
LIMS4-201ENST00000413601 ASTE1Q2TB18 679 aaPredicted RBP15.08■□□□□ 0
LIMS4-201ENST00000413601 PARP15Q460N3 678 aa15.08■□□□□ 0
LIMS4-201ENST00000413601 PIP5KL1Q5T9C9 394 aa15.08■□□□□ 0
LIMS4-201ENST00000413601 PSAPL1Q6NUJ1 521 aa15.08■□□□□ 0
LIMS4-201ENST00000413601 RFX8Q6ZV50 586 aa15.08■□□□□ 0
LIMS4-201ENST00000413601 PSTKQ8IV42 348 aaKnown RBP15.08■□□□□ 0
LIMS4-201ENST00000413601 RYBPQ8N488 228 aaPredicted RBP15.08■□□□□ 0
LIMS4-201ENST00000413601 OR6K2Q8NGY2 324 aa15.08■□□□□ 0
LIMS4-201ENST00000413601 HSPH1Q92598 858 aa15.08■□□□□ 0
LIMS4-201ENST00000413601 CELF6Q96J87 481 aaKnown RBP15.08■□□□□ 0
LIMS4-201ENST00000413601 CHP1Q99653 195 aa15.08■□□□□ 0
LIMS4-201ENST00000413601 PACSIN1Q9BY11 444 aa15.08■□□□□ 0
LIMS4-201ENST00000413601 TRIM5Q9C035 493 aa15.08■□□□□ 0
LIMS4-201ENST00000413601 ZDHHC5Q9C0B5 715 aa15.08■□□□□ 0
LIMS4-201ENST00000413601 KDM4CQ9H3R0 1056 aa15.08■□□□□ 0
LIMS4-201ENST00000413601 DEF6Q9H4E7 631 aa15.08■□□□□ 0
LIMS4-201ENST00000413601 LRRC19Q9H756 370 aa15.08■□□□□ 0
LIMS4-201ENST00000413601 ZWILCHQ9H900 591 aa15.08■□□□□ 0
LIMS4-201ENST00000413601 OSGEPQ9NPF4 335 aa15.08■□□□□ 0
LIMS4-201ENST00000413601 DYRK4Q9NR20 520 aa15.08■□□□□ 0
LIMS4-201ENST00000413601 DNAAF2Q9NVR5 837 aaKnown RBP15.08■□□□□ 0
LIMS4-201ENST00000413601 CWC15Q9P013 229 aaKnown RBP15.08■□□□□ 0
LIMS4-201ENST00000413601 CACNA1AO00555 2505 aa15.07■□□□□ 0
LIMS4-201ENST00000413601 PCNX2A6NKB5 2137 aa15.07■□□□□ 0
LIMS4-201ENST00000413601 MYO1FO00160 1098 aa15.07■□□□□ 0
LIMS4-201ENST00000413601 WNT9AO14904 365 aa15.07■□□□□ 0
LIMS4-201ENST00000413601 AKR1B10O60218 316 aa15.07■□□□□ 0
LIMS4-201ENST00000413601 GJB3O75712 270 aa15.07■□□□□ 0
LIMS4-201ENST00000413601 TMCC1O94876 653 aa15.07■□□□□ 0
LIMS4-201ENST00000413601 ERCC2P18074 760 aa15.07■□□□□ 0
LIMS4-201ENST00000413601 MAT2AP31153 395 aaKnown RBP15.07■□□□□ 0
LIMS4-201ENST00000413601 GKP32189 559 aa15.07■□□□□ 0
LIMS4-201ENST00000413601 GRIA4P48058 902 aa15.07■□□□□ 0
LIMS4-201ENST00000413601 HCAR3P49019 387 aa15.07■□□□□ 0
LIMS4-201ENST00000413601 NOVA1P51513 510 aaKnown RBP15.07■□□□□ 0
LIMS4-201ENST00000413601 NDST2P52849 883 aa15.07■□□□□ 0
LIMS4-201ENST00000413601 SNRPD1P62314 119 aaKnown RBP15.07■□□□□ 0
LIMS4-201ENST00000413601 HLA-BQ31612 363 aa15.07■□□□□ 0
LIMS4-201ENST00000413601 BOLA3Q53S33 107 aa15.07■□□□□ 0
LIMS4-201ENST00000413601 ATXN7L2Q5T6C5 722 aaPredicted RBP15.07■□□□□ 0
LIMS4-201ENST00000413601 TXNRD3NBQ6F5E7 133 aa15.07■□□□□ 0
LIMS4-201ENST00000413601 SARM1Q6SZW1 724 aa15.07■□□□□ 0
LIMS4-201ENST00000413601 ADAT2Q7Z6V5 191 aaKnown RBP15.07■□□□□ 0
LIMS4-201ENST00000413601 PLPP6Q8IY26 295 aa15.07■□□□□ 0
LIMS4-201ENST00000413601 NIPA2Q8N8Q9 360 aa15.07■□□□□ 0
LIMS4-201ENST00000413601 ZNF564Q8TBZ8 553 aaPredicted RBP15.07■□□□□ 0
LIMS4-201ENST00000413601 PPP1R16AQ96I34 528 aa15.07■□□□□ 0
LIMS4-201ENST00000413601 SLC6A18Q96N87 628 aa15.07■□□□□ 0
LIMS4-201ENST00000413601 SLC39A8Q9C0K1 460 aa15.07■□□□□ 0
LIMS4-201ENST00000413601 GAREM1Q9H706 876 aa15.07■□□□□ 0
LIMS4-201ENST00000413601 IL21RQ9HBE5 538 aa15.07■□□□□ 0
LIMS4-201ENST00000413601 DONSONQ9NYP3 566 aa15.07■□□□□ 0
LIMS4-201ENST00000413601 CTTNBP2NLQ9P2B4 639 aa15.07■□□□□ 0
LIMS4-201ENST00000413601 ANKRD6Q9Y2G4 727 aa15.07■□□□□ 0
LIMS4-201ENST00000413601 SNX11Q9Y5W9 270 aa15.07■□□□□ 0
LIMS4-201ENST00000413601 LRRK1Q38SD2 2015 aa15.06■□□□□ 0
LIMS4-201ENST00000413601 SSU72P8A0A1W2PR75 194 aa15.06■□□□□ 0
LIMS4-201ENST00000413601 J3KR12 359 aa15.06■□□□□ 0
LIMS4-201ENST00000413601 KRIT1O00522 736 aa15.06■□□□□ 0
LIMS4-201ENST00000413601 LATO43561 262 aa15.06■□□□□ 0
LIMS4-201ENST00000413601 GSRP00390 522 aa15.06■□□□□ 0
LIMS4-201ENST00000413601 RARAP10276 462 aa15.06■□□□□ 0
LIMS4-201ENST00000413601 CD59P13987 128 aa15.06■□□□□ 0
LIMS4-201ENST00000413601 PAPOLAP51003 745 aaKnown RBP15.06■□□□□ 0
LIMS4-201ENST00000413601 RACK1P63244 317 aaKnown RBP15.06■□□□□ 0
LIMS4-201ENST00000413601 CCDC15Q0P6D6 951 aa15.06■□□□□ 0
LIMS4-201ENST00000413601 TBX2Q13207 712 aaPredicted RBP15.06■□□□□ 0
LIMS4-201ENST00000413601 DPYSQ14117 519 aa15.06■□□□□ 0
LIMS4-201ENST00000413601 DPYSL2Q16555 572 aa15.06■□□□□ 0
LIMS4-201ENST00000413601 KIF19Q2TAC6 998 aa15.06■□□□□ 0
LIMS4-201ENST00000413601 MYLK3Q32MK0 819 aa15.06■□□□□ 0
LIMS4-201ENST00000413601 IL27RAQ6UWB1 636 aa15.06■□□□□ 0
LIMS4-201ENST00000413601 ERN2Q76MJ5 926 aaKnown RBP15.06■□□□□ 0
LIMS4-201ENST00000413601 PRPF39Q86UA1 669 aaKnown RBP15.06■□□□□ 0
LIMS4-201ENST00000413601 TRIM69Q86WT6 500 aa15.06■□□□□ 0
LIMS4-201ENST00000413601 DEFB124Q8NES8 71 aa15.06■□□□□ 0
LIMS4-201ENST00000413601 OR2AP1Q8NGE2 309 aa15.06■□□□□ 0
LIMS4-201ENST00000413601 CTNNBL1Q8WYA6 563 aaPredicted RBP15.06■□□□□ 0
LIMS4-201ENST00000413601 SERAC1Q96JX3 654 aa15.06■□□□□ 0
LIMS4-201ENST00000413601 HDAC8Q9BY41 377 aa15.06■□□□□ 0
LIMS4-201ENST00000413601 NHEJ1Q9H9Q4 299 aaPredicted RBP15.06■□□□□ 0
LIMS4-201ENST00000413601 AASDHPPTQ9NRN7 309 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms