RNA–Protein interactions for RNA: ENST00000412145.5

PTPN3-203, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-203ENST00000412145 ZNF543Q08ER8 600 aa7.47□□□□□ -1.21
PTPN3-203ENST00000412145 DDX39BQ13838 428 aaKnown RBP7.47□□□□□ -1.21
PTPN3-203ENST00000412145 LPIN1Q14693 890 aa7.47□□□□□ -1.21
PTPN3-203ENST00000412145 SNAP47Q5SQN1 464 aa7.47□□□□□ -1.21
PTPN3-203ENST00000412145 SHQ1Q6PI26 577 aaKnown RBP7.47□□□□□ -1.21
PTPN3-203ENST00000412145 DENND5BQ6ZUT9 1274 aa7.47□□□□□ -1.21
PTPN3-203ENST00000412145 TC2NQ8N9U0 490 aa7.47□□□□□ -1.21
PTPN3-203ENST00000412145 METTL6Q8TCB7 284 aa7.47□□□□□ -1.21
PTPN3-203ENST00000412145 GMCL1Q96IK5 515 aa7.47□□□□□ -1.21
PTPN3-203ENST00000412145 VPS35Q96QK1 796 aa7.47□□□□□ -1.21
PTPN3-203ENST00000412145 PCDHGA10Q9Y5H3 936 aa7.47□□□□□ -1.21
PTPN3-203ENST00000412145 APOL3O95236 402 aa7.47□□□□□ -1.21
PTPN3-203ENST00000412145 METTL18O95568 372 aa7.47□□□□□ -1.21
PTPN3-203ENST00000412145 CETPP11597 493 aa7.47□□□□□ -1.21
PTPN3-203ENST00000412145 ASMTP46597 345 aa7.47□□□□□ -1.21
PTPN3-203ENST00000412145 ELP6Q0PNE2 266 aa7.47□□□□□ -1.21
PTPN3-203ENST00000412145 RASGEF1BQ0VAM2 473 aa7.47□□□□□ -1.21
PTPN3-203ENST00000412145 KCTD21Q4G0X4 260 aa7.47□□□□□ -1.21
PTPN3-203ENST00000412145 ERMARDQ5T6L9 678 aa7.47□□□□□ -1.21
PTPN3-203ENST00000412145 LRRC38Q5VT99 294 aa7.47□□□□□ -1.21
PTPN3-203ENST00000412145 SHC4Q6S5L8 630 aa7.47□□□□□ -1.21
PTPN3-203ENST00000412145 GATAD2AQ86YP4 633 aa7.47□□□□□ -1.21
PTPN3-203ENST00000412145 SH3RF3Q8TEJ3 882 aaPredicted RBP7.47□□□□□ -1.21
PTPN3-203ENST00000412145 KLHL32Q96NJ5 620 aa7.47□□□□□ -1.21
PTPN3-203ENST00000412145 TDRD1Q9BXT4 1180 aaKnown RBP7.47□□□□□ -1.21
PTPN3-203ENST00000412145 KCTD5Q9NXV2 234 aa7.47□□□□□ -1.21
PTPN3-203ENST00000412145 FRMPD4Q14CM0 1322 aa7.47□□□□□ -1.21
PTPN3-203ENST00000412145 M0QYT0 321 aa7.47□□□□□ -1.21
PTPN3-203ENST00000412145 HLA-DQA2P01906 255 aa7.47□□□□□ -1.21
PTPN3-203ENST00000412145 MTHFD1P11586 935 aaKnown RBP7.47□□□□□ -1.21
PTPN3-203ENST00000412145 ATP4AP20648 1035 aa7.47□□□□□ -1.21
PTPN3-203ENST00000412145 ACADVLP49748 655 aa7.47□□□□□ -1.21
PTPN3-203ENST00000412145 ILF3Q12906 894 aaKnown RBP eCLIP7.47□□□□□ -1.21
PTPN3-203ENST00000412145 GRB14Q14449 540 aa7.47□□□□□ -1.21
PTPN3-203ENST00000412145 MGAT5BQ3V5L5 792 aa7.47□□□□□ -1.21
PTPN3-203ENST00000412145 ZNF720Q7Z2F6 126 aa7.47□□□□□ -1.21
PTPN3-203ENST00000412145 LHFPL3Q86UP9 236 aa7.47□□□□□ -1.21
PTPN3-203ENST00000412145 DYNLL2Q96FJ2 89 aa7.47□□□□□ -1.21
PTPN3-203ENST00000412145 RBM4BQ9BQ04 359 aaKnown RBP7.47□□□□□ -1.21
PTPN3-203ENST00000412145 MGME1Q9BQP7 344 aa7.47□□□□□ -1.21
PTPN3-203ENST00000412145 RBM4Q9BWF3 364 aaKnown RBP7.47□□□□□ -1.21
PTPN3-203ENST00000412145 MED28Q9H204 178 aa7.47□□□□□ -1.21
PTPN3-203ENST00000412145 TTYH1Q9H313 450 aaPredicted RBP7.47□□□□□ -1.21
PTPN3-203ENST00000412145 THUMPD1Q9NXG2 353 aaKnown RBP7.47□□□□□ -1.21
PTPN3-203ENST00000412145 TAF6LQ9Y6J9 622 aa7.47□□□□□ -1.21
PTPN3-203ENST00000412145 CHURC1-FNTBB4DL54 471 aa7.46□□□□□ -1.21
PTPN3-203ENST00000412145 TEX33O43247 280 aa7.46□□□□□ -1.21
PTPN3-203ENST00000412145 FTH1P02794 183 aa7.46□□□□□ -1.21
PTPN3-203ENST00000412145 GCNT1Q02742 428 aa7.46□□□□□ -1.21
PTPN3-203ENST00000412145 SYT12Q8IV01 421 aa7.46□□□□□ -1.21
PTPN3-203ENST00000412145 DNAJA4Q8WW22 397 aaPredicted RBP7.46□□□□□ -1.21
PTPN3-203ENST00000412145 TRIM38O00635 465 aa7.46□□□□□ -1.21
PTPN3-203ENST00000412145 PECAM1P16284 738 aaPredicted RBP7.46□□□□□ -1.21
PTPN3-203ENST00000412145 CASP5P51878 434 aa7.46□□□□□ -1.21
PTPN3-203ENST00000412145 GLRA4Q5JXX5 417 aa7.46□□□□□ -1.21
PTPN3-203ENST00000412145 ZCCHC12Q6PEW1 402 aa7.46□□□□□ -1.21
PTPN3-203ENST00000412145 LRRC69Q6ZNQ3 347 aa7.46□□□□□ -1.21
PTPN3-203ENST00000412145 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.46□□□□□ -1.21
PTPN3-203ENST00000412145 TMEM17Q86X19 198 aa7.46□□□□□ -1.21
PTPN3-203ENST00000412145 TTC29Q8NA56 475 aaPredicted RBP7.46□□□□□ -1.21
PTPN3-203ENST00000412145 CASKIN2Q8WXE0 1202 aa7.46□□□□□ -1.21
PTPN3-203ENST00000412145 SMARCD1Q96GM5 515 aa7.46□□□□□ -1.21
PTPN3-203ENST00000412145 MXRA8Q9BRK3 442 aa7.46□□□□□ -1.21
PTPN3-203ENST00000412145 CBWD1Q9BRT8 395 aa7.46□□□□□ -1.21
PTPN3-203ENST00000412145 RAVER2Q9HCJ3 691 aaKnown RBP7.46□□□□□ -1.21
PTPN3-203ENST00000412145 MID1IP1Q9NPA3 183 aa7.46□□□□□ -1.21
PTPN3-203ENST00000412145 DDX20Q9UHI6 824 aaKnown RBP7.46□□□□□ -1.21
PTPN3-203ENST00000412145 A0A1W2PQ67 120 aa7.46□□□□□ -1.22
PTPN3-203ENST00000412145 TULP3O75386 442 aa7.46□□□□□ -1.22
PTPN3-203ENST00000412145 FGF19O95750 216 aa7.46□□□□□ -1.22
PTPN3-203ENST00000412145 OTCP00480 354 aa7.46□□□□□ -1.22
PTPN3-203ENST00000412145 GYPCP04921 128 aa7.46□□□□□ -1.22
PTPN3-203ENST00000412145 SERPINA6P08185 405 aa7.46□□□□□ -1.22
PTPN3-203ENST00000412145 ANXA5P08758 320 aa7.46□□□□□ -1.22
PTPN3-203ENST00000412145 PET100P0DJ07 73 aa7.46□□□□□ -1.22
PTPN3-203ENST00000412145 SERPINA4P29622 427 aa7.46□□□□□ -1.22
PTPN3-203ENST00000412145 AVPR1AP37288 418 aa7.46□□□□□ -1.22
PTPN3-203ENST00000412145 PSMD5Q16401 504 aa7.46□□□□□ -1.22
PTPN3-203ENST00000412145 TMEM86AQ8N2M4 240 aa7.46□□□□□ -1.22
PTPN3-203ENST00000412145 POC5Q8NA72 575 aa7.46□□□□□ -1.22
PTPN3-203ENST00000412145 SLC9A6Q92581 669 aa7.46□□□□□ -1.22
PTPN3-203ENST00000412145 NACC2Q96BF6 587 aa7.46□□□□□ -1.22
PTPN3-203ENST00000412145 KLF6Q99612 283 aaPredicted RBP7.46□□□□□ -1.22
PTPN3-203ENST00000412145 ELOVL4Q9GZR5 314 aa7.46□□□□□ -1.22
PTPN3-203ENST00000412145 PIH1D3Q9NQM4 214 aaKnown RBP7.46□□□□□ -1.22
PTPN3-203ENST00000412145 CDC42BPAQ5VT25 1732 aa7.46□□□□□ -1.22
PTPN3-203ENST00000412145 ZNF157P51786 506 aaPredicted RBP7.46□□□□□ -1.22
PTPN3-203ENST00000412145 RPP38P78345 283 aaKnown RBP7.46□□□□□ -1.22
PTPN3-203ENST00000412145 ABATP80404 500 aa7.46□□□□□ -1.22
PTPN3-203ENST00000412145 MRPS22P82650 360 aaKnown RBP7.46□□□□□ -1.22
PTPN3-203ENST00000412145 TRIM28Q13263 835 aaKnown RBP7.46□□□□□ -1.22
PTPN3-203ENST00000412145 RHEBQ15382 184 aa7.46□□□□□ -1.22
PTPN3-203ENST00000412145 LACTB2Q53H82 288 aaPredicted RBP7.46□□□□□ -1.22
PTPN3-203ENST00000412145 N4BP2L1Q5TBK1 243 aaPredicted RBP7.46□□□□□ -1.22
PTPN3-203ENST00000412145 PI16Q6UXB8 463 aa7.46□□□□□ -1.22
PTPN3-203ENST00000412145 SPOCD1Q6ZMY3 1216 aa7.46□□□□□ -1.22
PTPN3-203ENST00000412145 NT5DC3Q86UY8 548 aa7.46□□□□□ -1.22
PTPN3-203ENST00000412145 TPD52L3Q96J77 140 aa7.46□□□□□ -1.22
PTPN3-203ENST00000412145 FRMD6Q96NE9 622 aa7.46□□□□□ -1.22
PTPN3-203ENST00000412145 CNPPD1Q9BV87 410 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms