RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 OMDQ99983 421 aa20.18■□□□□ 0.82
PDLIM2-207ENST00000409417 HEPHQ9BQS7 1158 aa20.18■□□□□ 0.82
PDLIM2-207ENST00000409417 GPR174Q9BXC1 333 aa20.18■□□□□ 0.82
PDLIM2-207ENST00000409417 BTBD1Q9H0C5 482 aa20.18■□□□□ 0.82
PDLIM2-207ENST00000409417 SGK2Q9HBY8 427 aa20.18■□□□□ 0.82
PDLIM2-207ENST00000409417 SERGEFQ9UGK8 458 aa20.18■□□□□ 0.82
PDLIM2-207ENST00000409417 IL36AQ9UHA7 158 aa20.18■□□□□ 0.82
PDLIM2-207ENST00000409417 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.18■□□□□ 0.82
PDLIM2-207ENST00000409417 PCDHGA5Q9Y5G8 931 aa20.18■□□□□ 0.82
PDLIM2-207ENST00000409417 A0A0U1RQJ8 604 aa20.18■□□□□ 0.82
PDLIM2-207ENST00000409417 MACROD2A1Z1Q3 448 aa20.18■□□□□ 0.82
PDLIM2-207ENST00000409417 PALMO75781 387 aa20.18■□□□□ 0.82
PDLIM2-207ENST00000409417 EPN2O95208 641 aa20.18■□□□□ 0.82
PDLIM2-207ENST00000409417 ACSL1P33121 698 aa20.18■□□□□ 0.82
PDLIM2-207ENST00000409417 PTGER3P43115 390 aa20.18■□□□□ 0.82
PDLIM2-207ENST00000409417 DHPSP49366 369 aaPredicted RBP20.18■□□□□ 0.82
PDLIM2-207ENST00000409417 METAP1P53582 386 aa20.18■□□□□ 0.82
PDLIM2-207ENST00000409417 RHOAP61586 193 aa20.18■□□□□ 0.82
PDLIM2-207ENST00000409417 CCZ1BP86790 482 aa20.18■□□□□ 0.82
PDLIM2-207ENST00000409417 CCZ1P86791 482 aaPredicted RBP20.18■□□□□ 0.82
PDLIM2-207ENST00000409417 RFTN1Q14699 578 aaPredicted RBP20.18■□□□□ 0.82
PDLIM2-207ENST00000409417 CYTH1Q15438 398 aa20.18■□□□□ 0.82
PDLIM2-207ENST00000409417 KATNAL2Q8IYT4 538 aa20.18■□□□□ 0.82
PDLIM2-207ENST00000409417 HDDC3Q8N4P3 179 aa20.18■□□□□ 0.82
PDLIM2-207ENST00000409417 ATPAF2Q8N5M1 289 aa20.18■□□□□ 0.82
PDLIM2-207ENST00000409417 CADM4Q8NFZ8 388 aa20.18■□□□□ 0.82
PDLIM2-207ENST00000409417 GRIN3AQ8TCU5 1115 aa20.18■□□□□ 0.82
PDLIM2-207ENST00000409417 FOXJ1Q92949 421 aa20.18■□□□□ 0.82
PDLIM2-207ENST00000409417 RNF25Q96BH1 459 aaPredicted RBP20.18■□□□□ 0.82
PDLIM2-207ENST00000409417 GDAP1L1Q96MZ0 367 aa20.18■□□□□ 0.82
PDLIM2-207ENST00000409417 ZNF599Q96NL3 588 aa20.18■□□□□ 0.82
PDLIM2-207ENST00000409417 HINFPQ9BQA5 517 aa20.18■□□□□ 0.82
PDLIM2-207ENST00000409417 MAK16Q9BXY0 300 aaKnown RBP20.18■□□□□ 0.82
PDLIM2-207ENST00000409417 PCED1AQ9H1Q7 454 aa20.18■□□□□ 0.82
PDLIM2-207ENST00000409417 NEUROG2Q9H2A3 272 aa20.18■□□□□ 0.82
PDLIM2-207ENST00000409417 TRIM10Q9UDY6 481 aa20.18■□□□□ 0.82
PDLIM2-207ENST00000409417 WASF2Q9Y6W5 498 aa20.18■□□□□ 0.82
PDLIM2-207ENST00000409417 NUMA1Q14980 2115 aa20.17■□□□□ 0.82
PDLIM2-207ENST00000409417 GRID2IPA4D2P6 1211 aa20.17■□□□□ 0.82
PDLIM2-207ENST00000409417 MFSD11O43934 449 aa20.17■□□□□ 0.82
PDLIM2-207ENST00000409417 LEFTY1O75610 366 aa20.17■□□□□ 0.82
PDLIM2-207ENST00000409417 POP4O95707 220 aaKnown RBP20.17■□□□□ 0.82
PDLIM2-207ENST00000409417 DRD3P35462 400 aa20.17■□□□□ 0.82
PDLIM2-207ENST00000409417 MYLK3Q32MK0 819 aa20.17■□□□□ 0.82
PDLIM2-207ENST00000409417 ARSIQ5FYB1 569 aa20.17■□□□□ 0.82
PDLIM2-207ENST00000409417 RNF10Q8N5U6 811 aaKnown RBP20.17■□□□□ 0.82
PDLIM2-207ENST00000409417 DEFB119Q8N690 84 aa20.17■□□□□ 0.82
PDLIM2-207ENST00000409417 FAM131CQ96AQ9 280 aa20.17■□□□□ 0.82
PDLIM2-207ENST00000409417 LRIG1Q96JA1 1093 aa20.17■□□□□ 0.82
PDLIM2-207ENST00000409417 TSGA10Q9BZW7 698 aa20.17■□□□□ 0.82
PDLIM2-207ENST00000409417 THADAQ6YHU6 1953 aa20.16■□□□□ 0.82
PDLIM2-207ENST00000409417 BCLAF3A2AJT9 711 aaKnown RBP20.16■□□□□ 0.82
PDLIM2-207ENST00000409417 KPNA3O00505 521 aaPredicted RBP20.16■□□□□ 0.82
PDLIM2-207ENST00000409417 MAFKO60675 156 aa20.16■□□□□ 0.82
PDLIM2-207ENST00000409417 LRP3O75074 770 aa20.16■□□□□ 0.82
PDLIM2-207ENST00000409417 ZRANB2O95218 330 aaKnown RBP eCLIP20.16■□□□□ 0.82
PDLIM2-207ENST00000409417 SEMA4FO95754 770 aa20.16■□□□□ 0.82
PDLIM2-207ENST00000409417 CREB5Q02930 508 aa20.16■□□□□ 0.82
PDLIM2-207ENST00000409417 ZNF33AQ06730 810 aa20.16■□□□□ 0.82
PDLIM2-207ENST00000409417 GALNT2Q10471 571 aa20.16■□□□□ 0.82
PDLIM2-207ENST00000409417 TAZQ16635 292 aa20.16■□□□□ 0.82
PDLIM2-207ENST00000409417 POM121L1PQ3SYA9 428 aa20.16■□□□□ 0.82
PDLIM2-207ENST00000409417 ATXN7L2Q5T6C5 722 aaPredicted RBP20.16■□□□□ 0.82
PDLIM2-207ENST00000409417 TMCO4Q5TGY1 634 aa20.16■□□□□ 0.82
PDLIM2-207ENST00000409417 LYSMD4Q5XG99 296 aa20.16■□□□□ 0.82
PDLIM2-207ENST00000409417 SLC9A4Q6AI14 798 aa20.16■□□□□ 0.82
PDLIM2-207ENST00000409417 MFSD7Q6UXD7 560 aa20.16■□□□□ 0.82
PDLIM2-207ENST00000409417 SLC41A1Q8IVJ1 513 aa20.16■□□□□ 0.82
PDLIM2-207ENST00000409417 RCOR2Q8IZ40 523 aa20.16■□□□□ 0.82
PDLIM2-207ENST00000409417 RYBPQ8N488 228 aaPredicted RBP20.16■□□□□ 0.82
PDLIM2-207ENST00000409417 DCLK2Q8N568 766 aa20.16■□□□□ 0.82
PDLIM2-207ENST00000409417 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.16■□□□□ 0.82
PDLIM2-207ENST00000409417 HSPA12BQ96MM6 686 aa20.16■□□□□ 0.82
PDLIM2-207ENST00000409417 ARRDC1-AS1Q9H2J1 176 aa20.16■□□□□ 0.82
PDLIM2-207ENST00000409417 LHX3Q9UBR4 397 aa20.16■□□□□ 0.82
PDLIM2-207ENST00000409417 KRIT1O00522 736 aa20.15■□□□□ 0.82
PDLIM2-207ENST00000409417 SLC7A4O43246 635 aa20.15■□□□□ 0.82
PDLIM2-207ENST00000409417 KRT86O43790 486 aa20.15■□□□□ 0.82
PDLIM2-207ENST00000409417 IGSF6O95976 241 aa20.15■□□□□ 0.82
PDLIM2-207ENST00000409417 PEX11BO96011 259 aa20.15■□□□□ 0.82
PDLIM2-207ENST00000409417 CCDC175P0C221 793 aa20.15■□□□□ 0.82
PDLIM2-207ENST00000409417 CTNNA1P35221 906 aaKnown RBP20.15■□□□□ 0.82
PDLIM2-207ENST00000409417 GARSP41250 739 aaKnown RBP20.15■□□□□ 0.82
PDLIM2-207ENST00000409417 CDKN2BP42772 138 aa20.15■□□□□ 0.82
PDLIM2-207ENST00000409417 MARCKSL1P49006 195 aa20.15■□□□□ 0.82
PDLIM2-207ENST00000409417 CCDC15Q0P6D6 951 aa20.15■□□□□ 0.82
PDLIM2-207ENST00000409417 CNTN1Q12860 1018 aa20.15■□□□□ 0.82
PDLIM2-207ENST00000409417 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.15■□□□□ 0.82
PDLIM2-207ENST00000409417 ARMCX6Q7L4S7 300 aa20.15■□□□□ 0.82
PDLIM2-207ENST00000409417 CYP2U1Q7Z449 544 aa20.15■□□□□ 0.82
PDLIM2-207ENST00000409417 SYCE1Q8N0S2 351 aa20.15■□□□□ 0.82
PDLIM2-207ENST00000409417 PLD5Q8N7P1 536 aa20.15■□□□□ 0.82
PDLIM2-207ENST00000409417 OR6K2Q8NGY2 324 aa20.15■□□□□ 0.82
PDLIM2-207ENST00000409417 EXD1Q8NHP7 514 aa20.15■□□□□ 0.82
PDLIM2-207ENST00000409417 KRT35Q92764 455 aa20.15■□□□□ 0.82
PDLIM2-207ENST00000409417 PPP1R16AQ96I34 528 aa20.15■□□□□ 0.82
PDLIM2-207ENST00000409417 ZDHHC6Q9H6R6 413 aa20.15■□□□□ 0.82
PDLIM2-207ENST00000409417 PCDHA3Q9Y5H8 950 aa20.15■□□□□ 0.82
PDLIM2-207ENST00000409417 METTL12A8MUP2 240 aa20.14■□□□□ 0.81
PDLIM2-207ENST00000409417 APOL1O14791 398 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms