RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 RPS6KA2Q15349 733 aa13.58□□□□□ -0.23
COL6A2-204ENST00000409416 TPSAB1Q15661 275 aa13.58□□□□□ -0.23
COL6A2-204ENST00000409416 KIF19Q2TAC6 998 aa13.58□□□□□ -0.23
COL6A2-204ENST00000409416 MAP7D1Q3KQU3 841 aa13.58□□□□□ -0.23
COL6A2-204ENST00000409416 SFT2D3Q587I9 215 aa13.58□□□□□ -0.23
COL6A2-204ENST00000409416 SH2D4BQ5SQS7 431 aa13.58□□□□□ -0.23
COL6A2-204ENST00000409416 FAM171A1Q5VUB5 890 aa13.58□□□□□ -0.23
COL6A2-204ENST00000409416 TMEM110Q86TL2 294 aa13.58□□□□□ -0.23
COL6A2-204ENST00000409416 SNX32Q86XE0 403 aa13.58□□□□□ -0.23
COL6A2-204ENST00000409416 KLHL23Q8NBE8 558 aa13.58□□□□□ -0.23
COL6A2-204ENST00000409416 CDC26Q8NHZ8 85 aa13.58□□□□□ -0.23
COL6A2-204ENST00000409416 ZNF512Q96ME7 567 aaPredicted RBP13.58□□□□□ -0.23
COL6A2-204ENST00000409416 COLEC11Q9BWP8 271 aa13.58□□□□□ -0.23
COL6A2-204ENST00000409416 FAM96AQ9H5X1 160 aa13.58□□□□□ -0.23
COL6A2-204ENST00000409416 CDH22Q9UJ99 828 aa13.58□□□□□ -0.23
COL6A2-204ENST00000409416 MTF2Q9Y483 593 aaPredicted RBP13.58□□□□□ -0.23
COL6A2-204ENST00000409416 NUP214P35658 2090 aaPredicted RBP13.58□□□□□ -0.24
COL6A2-204ENST00000409416 SLC12A8A0AV02 714 aa13.58□□□□□ -0.24
COL6A2-204ENST00000409416 PTGESO14684 152 aa13.58□□□□□ -0.24
COL6A2-204ENST00000409416 RNASEH1O60930 286 aaKnown RBP13.58□□□□□ -0.24
COL6A2-204ENST00000409416 SH3BGRLO75368 114 aa13.58□□□□□ -0.24
COL6A2-204ENST00000409416 SEC24DO94855 1032 aaPredicted RBP13.58□□□□□ -0.24
COL6A2-204ENST00000409416 SUPT7LO94864 414 aa13.58□□□□□ -0.24
COL6A2-204ENST00000409416 PIGNO95427 931 aa13.58□□□□□ -0.24
COL6A2-204ENST00000409416 ASGR1P07306 291 aa13.58□□□□□ -0.24
COL6A2-204ENST00000409416 MRPS22P82650 360 aaKnown RBP13.58□□□□□ -0.24
COL6A2-204ENST00000409416 GALNT3Q14435 633 aa13.58□□□□□ -0.24
COL6A2-204ENST00000409416 LBRQ14739 615 aaKnown RBP13.58□□□□□ -0.24
COL6A2-204ENST00000409416 GRM3Q14832 879 aa13.58□□□□□ -0.24
COL6A2-204ENST00000409416 PTPRRQ15256 657 aa13.58□□□□□ -0.24
COL6A2-204ENST00000409416 SPRYD7Q5W111 196 aa13.58□□□□□ -0.24
COL6A2-204ENST00000409416 USP50Q70EL3 339 aaPredicted RBP13.58□□□□□ -0.24
COL6A2-204ENST00000409416 ST13P4Q8IZP2 240 aaPredicted RBP13.58□□□□□ -0.24
COL6A2-204ENST00000409416 NUP93Q8N1F7 819 aa13.58□□□□□ -0.24
COL6A2-204ENST00000409416 FCRL2Q96LA5 508 aaPredicted RBP13.58□□□□□ -0.24
COL6A2-204ENST00000409416 OR52B2Q96RD2 323 aa13.58□□□□□ -0.24
COL6A2-204ENST00000409416 SEMA6AQ9H2E6 1030 aa13.58□□□□□ -0.24
COL6A2-204ENST00000409416 MTMR10Q9NXD2 777 aa13.58□□□□□ -0.24
COL6A2-204ENST00000409416 MAP1BP46821 2468 aaKnown RBP13.58□□□□□ -0.24
COL6A2-204ENST00000409416 C2P06681 752 aa13.58□□□□□ -0.24
COL6A2-204ENST00000409416 ARRB2P32121 409 aa13.58□□□□□ -0.24
COL6A2-204ENST00000409416 NOS2P35228 1153 aa13.58□□□□□ -0.24
COL6A2-204ENST00000409416 CD86P42081 329 aa13.58□□□□□ -0.24
COL6A2-204ENST00000409416 NR2C2P49116 596 aa13.58□□□□□ -0.24
COL6A2-204ENST00000409416 SCNN1BP51168 640 aa13.58□□□□□ -0.24
COL6A2-204ENST00000409416 IQSEC1Q6DN90 963 aa13.58□□□□□ -0.24
COL6A2-204ENST00000409416 MAVSQ7Z434 540 aa13.58□□□□□ -0.24
COL6A2-204ENST00000409416 ICA1LQ8NDH6 482 aa13.58□□□□□ -0.24
COL6A2-204ENST00000409416 CXorf38Q8TB03 319 aa13.58□□□□□ -0.24
COL6A2-204ENST00000409416 MOCS1Q9NZB8 636 aa13.58□□□□□ -0.24
COL6A2-204ENST00000409416 SSX2IPQ9Y2D8 614 aa13.58□□□□□ -0.24
COL6A2-204ENST00000409416 PPME1Q9Y570 386 aa13.58□□□□□ -0.24
COL6A2-204ENST00000409416 CAPN8A6NHC0 703 aa13.57□□□□□ -0.24
COL6A2-204ENST00000409416 SPRP35270 261 aaPredicted RBP13.57□□□□□ -0.24
COL6A2-204ENST00000409416 SLC25A52Q3SY17 297 aa13.57□□□□□ -0.24
COL6A2-204ENST00000409416 OR52E8Q6IFG1 317 aa13.57□□□□□ -0.24
COL6A2-204ENST00000409416 FSTL4Q6MZW2 842 aa13.57□□□□□ -0.24
COL6A2-204ENST00000409416 ZNF598Q86UK7 904 aaKnown RBP13.57□□□□□ -0.24
COL6A2-204ENST00000409416 SMG8Q8ND04 991 aaKnown RBP13.57□□□□□ -0.24
COL6A2-204ENST00000409416 CCDC167Q9P0B6 97 aa13.57□□□□□ -0.24
COL6A2-204ENST00000409416 ADAMTS6Q9UKP5 1117 aa13.57□□□□□ -0.24
COL6A2-204ENST00000409416 SHROOM3Q8TF72 1996 aa13.57□□□□□ -0.24
COL6A2-204ENST00000409416 YWHAHQ04917 246 aaPredicted RBP13.57□□□□□ -0.24
COL6A2-204ENST00000409416 SGO1Q5FBB7 561 aa13.57□□□□□ -0.24
COL6A2-204ENST00000409416 FSCBQ5H9T9 825 aa13.57□□□□□ -0.24
COL6A2-204ENST00000409416 ATG14Q6ZNE5 492 aa13.57□□□□□ -0.24
COL6A2-204ENST00000409416 ZNF280BQ86YH2 543 aa13.57□□□□□ -0.24
COL6A2-204ENST00000409416 NMD3Q96D46 503 aaKnown RBP13.57□□□□□ -0.24
COL6A2-204ENST00000409416 RTP4Q96DX8 246 aa13.57□□□□□ -0.24
COL6A2-204ENST00000409416 KLHL4Q9C0H6 718 aa13.57□□□□□ -0.24
COL6A2-204ENST00000409416 MORF4L1Q9UBU8 362 aa13.57□□□□□ -0.24
COL6A2-204ENST00000409416 ARHGAP26Q9UNA1 814 aa13.57□□□□□ -0.24
COL6A2-204ENST00000409416 A0A1W2PQH9 124 aa13.57□□□□□ -0.24
COL6A2-204ENST00000409416 F8W8V4 182 aa13.57□□□□□ -0.24
COL6A2-204ENST00000409416 PAGE1O75459 146 aa13.57□□□□□ -0.24
COL6A2-204ENST00000409416 COX4I1P13073 169 aa13.57□□□□□ -0.24
COL6A2-204ENST00000409416 DLG1Q12959 904 aa13.57□□□□□ -0.24
COL6A2-204ENST00000409416 CRHR2Q13324 411 aa13.57□□□□□ -0.24
COL6A2-204ENST00000409416 CYTH1Q15438 398 aa13.57□□□□□ -0.24
COL6A2-204ENST00000409416 TBCCQ15814 346 aa13.57□□□□□ -0.24
COL6A2-204ENST00000409416 FOXB2Q5VYV0 432 aa13.57□□□□□ -0.24
COL6A2-204ENST00000409416 LRRC8BQ6P9F7 803 aa13.57□□□□□ -0.24
COL6A2-204ENST00000409416 THEM5Q8N1Q8 247 aa13.57□□□□□ -0.24
COL6A2-204ENST00000409416 LENG8Q96PV6 779 aaPredicted RBP13.57□□□□□ -0.24
COL6A2-204ENST00000409416 TCF7L2Q9NQB0 619 aa13.57□□□□□ -0.24
COL6A2-204ENST00000409416 ARHGEF38Q9NXL2 777 aa13.57□□□□□ -0.24
COL6A2-204ENST00000409416 LRFN2Q9ULH4 789 aa13.57□□□□□ -0.24
COL6A2-204ENST00000409416 POMPQ9Y244 141 aa13.57□□□□□ -0.24
COL6A2-204ENST00000409416 DPYSL4O14531 572 aa13.56□□□□□ -0.24
COL6A2-204ENST00000409416 ZBTB14O43829 449 aa13.56□□□□□ -0.24
COL6A2-204ENST00000409416 FKBP6O75344 327 aa13.56□□□□□ -0.24
COL6A2-204ENST00000409416 PRSS56P0CW18 603 aa13.56□□□□□ -0.24
COL6A2-204ENST00000409416 PTPN3P26045 913 aa13.56□□□□□ -0.24
COL6A2-204ENST00000409416 CNTFP26441 200 aa13.56□□□□□ -0.24
COL6A2-204ENST00000409416 TPP2P29144 1249 aaPredicted RBP13.56□□□□□ -0.24
COL6A2-204ENST00000409416 GSTT1P30711 240 aa13.56□□□□□ -0.24
COL6A2-204ENST00000409416 LINGO4Q6UY18 593 aa13.56□□□□□ -0.24
COL6A2-204ENST00000409416 MARK2Q7KZI7 788 aaKnown RBP13.56□□□□□ -0.24
COL6A2-204ENST00000409416 SLC26A9Q7LBE3 791 aa13.56□□□□□ -0.24
COL6A2-204ENST00000409416 ZNF410Q86VK4 478 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms