RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 F5H0A9 414 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P17-201ENST00000403495 TP73O15350 636 aa4.14□□□□□ -1.75
HMGB1P17-201ENST00000403495 HLA-DQA2P01906 255 aa4.14□□□□□ -1.75
HMGB1P17-201ENST00000403495 NFKBIAP25963 317 aa4.14□□□□□ -1.75
HMGB1P17-201ENST00000403495 MLH1P40692 756 aa4.14□□□□□ -1.75
HMGB1P17-201ENST00000403495 HADHAP40939 763 aa4.14□□□□□ -1.75
HMGB1P17-201ENST00000403495 DPP6P42658 865 aa4.14□□□□□ -1.75
HMGB1P17-201ENST00000403495 ARF3P61204 181 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P17-201ENST00000403495 ARF1P84077 181 aaKnown RBP4.14□□□□□ -1.75
HMGB1P17-201ENST00000403495 CFHR1Q03591 330 aa4.14□□□□□ -1.75
HMGB1P17-201ENST00000403495 ZNF91Q05481 1191 aa4.14□□□□□ -1.75
HMGB1P17-201ENST00000403495 STIM1Q13586 685 aa4.14□□□□□ -1.75
HMGB1P17-201ENST00000403495 SUPT20HL1Q3ZLR7 823 aa4.14□□□□□ -1.75
HMGB1P17-201ENST00000403495 PLK5Q496M5 336 aa4.14□□□□□ -1.75
HMGB1P17-201ENST00000403495 MIDNQ504T8 468 aa4.14□□□□□ -1.75
HMGB1P17-201ENST00000403495 LCE5AQ5TCM9 118 aa4.14□□□□□ -1.75
HMGB1P17-201ENST00000403495 TMEM268Q5VZI3 342 aa4.14□□□□□ -1.75
HMGB1P17-201ENST00000403495 HIST2H2BCQ6DN03 193 aa4.14□□□□□ -1.75
HMGB1P17-201ENST00000403495 HIST2H2BDQ6DRA6 164 aa4.14□□□□□ -1.75
HMGB1P17-201ENST00000403495 IL20RBQ6UXL0 311 aa4.14□□□□□ -1.75
HMGB1P17-201ENST00000403495 RRM2BQ7LG56 351 aa4.14□□□□□ -1.75
HMGB1P17-201ENST00000403495 PRSS45Q7RTY3 260 aa4.14□□□□□ -1.75
HMGB1P17-201ENST00000403495 DDIASQ8IXT1 998 aa4.14□□□□□ -1.75
HMGB1P17-201ENST00000403495 SEMA6DQ8NFY4 1073 aa4.14□□□□□ -1.75
HMGB1P17-201ENST00000403495 WIPF2Q8TF74 440 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P17-201ENST00000403495 PABPC5Q96DU9 382 aaKnown RBP4.14□□□□□ -1.75
HMGB1P17-201ENST00000403495 SAAL1Q96ER3 474 aa4.14□□□□□ -1.75
HMGB1P17-201ENST00000403495 ACTR5Q9H9F9 607 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P17-201ENST00000403495 SCPEP1Q9HB40 452 aa4.14□□□□□ -1.75
HMGB1P17-201ENST00000403495 ENTPD7Q9NQZ7 604 aa4.14□□□□□ -1.75
HMGB1P17-201ENST00000403495 EIF2B3Q9NR50 452 aaKnown RBP4.14□□□□□ -1.75
HMGB1P17-201ENST00000403495 TMEM184CQ9NVA4 438 aa4.14□□□□□ -1.75
HMGB1P17-201ENST00000403495 HAUS2Q9NVX0 235 aa4.14□□□□□ -1.75
HMGB1P17-201ENST00000403495 KIAA1456Q9P272 454 aa4.14□□□□□ -1.75
HMGB1P17-201ENST00000403495 PCDHGB5Q9Y5G0 923 aa4.14□□□□□ -1.75
HMGB1P17-201ENST00000403495 TDRD9Q8NDG6 1382 aaKnown RBP4.14□□□□□ -1.75
HMGB1P17-201ENST00000403495 FAM237BA0A1B0GVD1 139 aa4.13□□□□□ -1.75
HMGB1P17-201ENST00000403495 SMIM35A0A1B0GVV1 85 aa4.13□□□□□ -1.75
HMGB1P17-201ENST00000403495 ARHGAP10A1A4S6 786 aa4.13□□□□□ -1.75
HMGB1P17-201ENST00000403495 FOXO6A8MYZ6 492 aa4.13□□□□□ -1.75
HMGB1P17-201ENST00000403495 LIASO43766 372 aa4.13□□□□□ -1.75
HMGB1P17-201ENST00000403495 ACADMP11310 421 aa4.13□□□□□ -1.75
HMGB1P17-201ENST00000403495 RARGP13631 454 aa4.13□□□□□ -1.75
HMGB1P17-201ENST00000403495 POU1F1P28069 291 aa4.13□□□□□ -1.75
HMGB1P17-201ENST00000403495 HOXD9P28356 352 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P17-201ENST00000403495 ACTN2P35609 894 aa4.13□□□□□ -1.75
HMGB1P17-201ENST00000403495 CLCN5P51795 746 aa4.13□□□□□ -1.75
HMGB1P17-201ENST00000403495 RARSP54136 660 aaKnown RBP4.13□□□□□ -1.75
HMGB1P17-201ENST00000403495 SLC12A2P55011 1212 aa4.13□□□□□ -1.75
HMGB1P17-201ENST00000403495 CLDN2P57739 230 aa4.13□□□□□ -1.75
HMGB1P17-201ENST00000403495 CYP4A11Q02928 519 aa4.13□□□□□ -1.75
HMGB1P17-201ENST00000403495 PKP1Q13835 747 aa4.13□□□□□ -1.75
HMGB1P17-201ENST00000403495 EIF4A2Q14240 407 aaKnown RBP4.13□□□□□ -1.75
HMGB1P17-201ENST00000403495 VEPH1Q14D04 833 aa4.13□□□□□ -1.75
HMGB1P17-201ENST00000403495 SLC9C1Q4G0N8 1177 aa4.13□□□□□ -1.75
HMGB1P17-201ENST00000403495 STRIP1Q5VSL9 837 aa4.13□□□□□ -1.75
HMGB1P17-201ENST00000403495 TTI2Q6NXR4 508 aa4.13□□□□□ -1.75
HMGB1P17-201ENST00000403495 CYP20A1Q6UW02 462 aa4.13□□□□□ -1.75
HMGB1P17-201ENST00000403495 ZNF793Q6ZN11 406 aa4.13□□□□□ -1.75
HMGB1P17-201ENST00000403495 IKBIPQ70UQ0 350 aa4.13□□□□□ -1.75
HMGB1P17-201ENST00000403495 SLC46A3Q7Z3Q1 461 aa4.13□□□□□ -1.75
HMGB1P17-201ENST00000403495 RD3Q7Z3Z2 195 aa4.13□□□□□ -1.75
HMGB1P17-201ENST00000403495 DHX40Q8IX18 779 aaKnown RBP4.13□□□□□ -1.75
HMGB1P17-201ENST00000403495 KIAA2013Q8IYS2 634 aa4.13□□□□□ -1.75
HMGB1P17-201ENST00000403495 TTC39CQ8N584 583 aa4.13□□□□□ -1.75
HMGB1P17-201ENST00000403495 WDTC1Q8N5D0 677 aa4.13□□□□□ -1.75
HMGB1P17-201ENST00000403495 PDILTQ8N807 584 aa4.13□□□□□ -1.75
HMGB1P17-201ENST00000403495 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P17-201ENST00000403495 HASPINQ8TF76 798 aa4.13□□□□□ -1.75
HMGB1P17-201ENST00000403495 USP6NLQ92738 828 aa4.13□□□□□ -1.75
HMGB1P17-201ENST00000403495 TEFMQ96QE5 360 aaKnown RBP4.13□□□□□ -1.75
HMGB1P17-201ENST00000403495 FRG2BQ96QU4 278 aa4.13□□□□□ -1.75
HMGB1P17-201ENST00000403495 LHPPQ9H008 270 aa4.13□□□□□ -1.75
HMGB1P17-201ENST00000403495 POLR1BQ9H9Y6 1135 aa4.13□□□□□ -1.75
HMGB1P17-201ENST00000403495 WDR6Q9NNW5 1121 aaKnown RBP4.13□□□□□ -1.75
HMGB1P17-201ENST00000403495 DIAPH3Q9NSV4 1193 aa4.13□□□□□ -1.75
HMGB1P17-201ENST00000403495 TMEM45AQ9NWC5 275 aa4.13□□□□□ -1.75
HMGB1P17-201ENST00000403495 GRHL1Q9NZI5 618 aa4.13□□□□□ -1.75
HMGB1P17-201ENST00000403495 MPP6Q9NZW5 540 aa4.13□□□□□ -1.75
HMGB1P17-201ENST00000403495 ADD3Q9UEY8 706 aaKnown RBP4.13□□□□□ -1.75
HMGB1P17-201ENST00000403495 LIMA1Q9UHB6 759 aaKnown RBP4.13□□□□□ -1.75
HMGB1P17-201ENST00000403495 INTS6Q9UL03 887 aaKnown RBP4.13□□□□□ -1.75
HMGB1P17-201ENST00000403495 KCNE2Q9Y6J6 123 aa4.13□□□□□ -1.75
HMGB1P17-201ENST00000403495 TRBV5-7A0A0A0MS05 114 aa4.12□□□□□ -1.75
HMGB1P17-201ENST00000403495 WIPF3A6NGB9 483 aa4.12□□□□□ -1.75
HMGB1P17-201ENST00000403495 CBY3A6NI87 242 aa4.12□□□□□ -1.75
HMGB1P17-201ENST00000403495 A6NNC1 897 aa4.12□□□□□ -1.75
HMGB1P17-201ENST00000403495 FAM157AC9JC47 383 aa4.12□□□□□ -1.75
HMGB1P17-201ENST00000403495 TMCC1O94876 653 aa4.12□□□□□ -1.75
HMGB1P17-201ENST00000403495 PRKCGP05129 697 aa4.12□□□□□ -1.75
HMGB1P17-201ENST00000403495 CHRNB1P11230 501 aa4.12□□□□□ -1.75
HMGB1P17-201ENST00000403495 LAMP2P13473 410 aa4.12□□□□□ -1.75
HMGB1P17-201ENST00000403495 SLC2A4P14672 509 aa4.12□□□□□ -1.75
HMGB1P17-201ENST00000403495 ATP5F1P24539 256 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P17-201ENST00000403495 ARL3P36405 182 aa4.12□□□□□ -1.75
HMGB1P17-201ENST00000403495 SLC18A2Q05940 514 aa4.12□□□□□ -1.75
HMGB1P17-201ENST00000403495 PRKG2Q13237 762 aa4.12□□□□□ -1.75
HMGB1P17-201ENST00000403495 MAMLD1Q13495 774 aa4.12□□□□□ -1.75
HMGB1P17-201ENST00000403495 PDE1CQ14123 709 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P17-201ENST00000403495 FRG1Q14331 258 aaKnown RBP4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms