RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 POLHQ9Y253 713 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 TNFSF13BQ9Y275 285 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 PCDHGA8Q9Y5G5 932 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 PTCH2Q9Y6C5 1203 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 IRS2Q9Y4H2 1338 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 H0YJX3 145 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 MEIS1O00470 390 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 SYN3O14994 580 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 CLIC2O15247 247 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 GGPS1O95749 300 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 ADRB2P07550 413 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 FGF4P08620 206 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 ACAA1P09110 424 aaPredicted RBP6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 NUDT17P0C025 328 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 SRGAP2BP0DMP2 458 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 PCK1P35558 622 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 TAGLN2P37802 199 aaKnown RBP6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 STAT5BP51692 787 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 ITIH4Q14624 930 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 DRAP1Q14919 205 aaPredicted RBP6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 QRICH1Q2TAL8 776 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 SAPCD1Q5SSQ6 148 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 JMJD6Q6NYC1 403 aaPredicted RBP6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 DEGS2Q6QHC5 323 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 NLRP8Q86W28 1048 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 SLC30A5Q8TAD4 765 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 DCAF4Q8WV16 495 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 SGF29Q96ES7 293 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 PPP1R36Q96LQ0 422 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 TRIM51Q9BSJ1 452 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 AMNQ9BXJ7 453 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 FRMD8Q9BZ67 464 aaPredicted RBP6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 C6orf62Q9GZU0 229 aaPredicted RBP6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 HAUS2Q9NVX0 235 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 CYB5R1Q9UHQ9 305 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 DNAJC12Q9UKB3 198 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 STXBP5LQ9Y2K9 1186 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 NAALAD2Q9Y3Q0 740 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 HBS1LQ9Y450 684 aaKnown RBP6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 CFAP73A6NFT4 308 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 CCT8L1PA6NM43 557 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 PHF20L1A8MW92 1017 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 H7C0C1 242 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 RASGRF2O14827 1237 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 SCAF4O95104 1147 aaKnown RBP6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 SNAPINO95295 136 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 EYA4O95677 639 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 HRGP04196 525 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 GFAPP14136 432 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 MSH2P43246 934 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 AFF3P51826 1226 aaKnown RBP6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 PEX3P56589 373 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 JAM2P57087 298 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 KCTD21Q4G0X4 260 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 ERMARDQ5T6L9 678 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 PTCHD4Q6ZW05 846 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 MARK2Q7KZI7 788 aaKnown RBP6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 LIMS2Q7Z4I7 341 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 ELMOD1Q8N336 334 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 PLD5Q8N7P1 536 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 AGBL5Q8NDL9 886 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 CHST13Q8NET6 341 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 SYTL5Q8TDW5 730 aaPredicted RBP6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 EXT2Q93063 718 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 NEUROG2Q9H2A3 272 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 AGO4Q9HCK5 861 aaKnown RBP6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 OLFML3Q9NRN5 406 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 GRHPRQ9UBQ7 328 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 ERGIC3Q9Y282 383 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 DTX4Q9Y2E6 619 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 DNMT3AQ9Y6K1 912 aaPredicted RBP6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 MYH7BA7E2Y1 1941 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 UBE4BO95155 1302 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 A0A1W2PPW3 197 aa6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 SMIM23A6NLE4 172 aa6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 FAM196BA6NMK8 535 aa6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 H0Y858 1186 aa6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 EFCAB14O75071 495 aa6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 PHF2O75151 1096 aa6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 CD46P15529 392 aa6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 NPR1P16066 1061 aa6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 PCSK2P16519 638 aa6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 HOXB8P17481 243 aaPredicted RBP6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 TUBP50607 506 aa6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 EIF3EP60228 445 aaKnown RBP6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 ARHGAP8P85298 464 aa6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 MYL7Q01449 175 aa6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 CHRNEQ04844 493 aa6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 MAPK7Q13164 816 aa6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 ZNF177Q13360 481 aaPredicted RBP6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 STARD3Q14849 445 aa6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 SLC39A12Q504Y0 691 aa6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 KSR1Q8IVT5 923 aa6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 SCUBE3Q8IX30 993 aa6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 TNS4Q8IZW8 715 aa6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 RIN3Q8TB24 985 aa6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 AFG1LQ8WV93 481 aa6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 PTPRN2Q92932 1015 aa6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 TLCD1Q96CP7 247 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms