RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 ASTLQ6HA08 431 aaPredicted RBP19.79■□□□□ 0.76
PDLIM2-205ENST00000397761 PRPF39Q86UA1 669 aaKnown RBP19.79■□□□□ 0.76
PDLIM2-205ENST00000397761 APCDD1Q8J025 514 aa19.79■□□□□ 0.76
PDLIM2-205ENST00000397761 BBS5Q8N3I7 341 aa19.79■□□□□ 0.76
PDLIM2-205ENST00000397761 UBLCP1Q8WVY7 318 aaPredicted RBP19.79■□□□□ 0.76
PDLIM2-205ENST00000397761 SUSD6Q92537 303 aa19.79■□□□□ 0.76
PDLIM2-205ENST00000397761 SIGLEC10Q96LC7 697 aa19.79■□□□□ 0.76
PDLIM2-205ENST00000397761 NECTIN4Q96NY8 510 aa19.79■□□□□ 0.76
PDLIM2-205ENST00000397761 POLR1EQ9GZS1 481 aaKnown RBP19.79■□□□□ 0.76
PDLIM2-205ENST00000397761 ZFP14Q9HCL3 533 aa19.79■□□□□ 0.76
PDLIM2-205ENST00000397761 CASS4Q9NQ75 786 aa19.79■□□□□ 0.76
PDLIM2-205ENST00000397761 HAUS2Q9NVX0 235 aa19.79■□□□□ 0.76
PDLIM2-205ENST00000397761 AVILO75366 819 aa19.79■□□□□ 0.76
PDLIM2-205ENST00000397761 NEBLO76041 1014 aa19.79■□□□□ 0.76
PDLIM2-205ENST00000397761 ABHD2P08910 425 aa19.79■□□□□ 0.76
PDLIM2-205ENST00000397761 CR2P20023 1033 aa19.79■□□□□ 0.76
PDLIM2-205ENST00000397761 ADRA1AP35348 466 aa19.79■□□□□ 0.76
PDLIM2-205ENST00000397761 GEMIN4P57678 1058 aaKnown RBP19.79■□□□□ 0.76
PDLIM2-205ENST00000397761 MPP3Q13368 585 aa19.79■□□□□ 0.76
PDLIM2-205ENST00000397761 ZNF235Q14590 738 aa19.79■□□□□ 0.76
PDLIM2-205ENST00000397761 IHHQ14623 411 aa19.79■□□□□ 0.76
PDLIM2-205ENST00000397761 KYNUQ16719 465 aa19.79■□□□□ 0.76
PDLIM2-205ENST00000397761 CCDC38Q502W7 563 aa19.79■□□□□ 0.76
PDLIM2-205ENST00000397761 TANGO2Q6ICL3 276 aa19.79■□□□□ 0.76
PDLIM2-205ENST00000397761 KDELC1Q6UW63 502 aa19.79■□□□□ 0.76
PDLIM2-205ENST00000397761 VITQ6UXI7 678 aa19.79■□□□□ 0.76
PDLIM2-205ENST00000397761 LRIG3Q6UXM1 1119 aa19.79■□□□□ 0.76
PDLIM2-205ENST00000397761 LEKR1Q6ZMV7 388 aa19.79■□□□□ 0.76
PDLIM2-205ENST00000397761 ZBED8Q8IZ13 594 aa19.79■□□□□ 0.76
PDLIM2-205ENST00000397761 SPATA22Q8NHS9 363 aa19.79■□□□□ 0.76
PDLIM2-205ENST00000397761 C9orf72Q96LT7 481 aa19.79■□□□□ 0.76
PDLIM2-205ENST00000397761 ZIM3Q96PE6 472 aa19.79■□□□□ 0.76
PDLIM2-205ENST00000397761 POMKQ9H5K3 350 aa19.79■□□□□ 0.76
PDLIM2-205ENST00000397761 AGPSO00116 658 aa19.78■□□□□ 0.76
PDLIM2-205ENST00000397761 BANF1O75531 89 aa19.78■□□□□ 0.76
PDLIM2-205ENST00000397761 MT-CYBP00156 380 aaPredicted RBP19.78■□□□□ 0.76
PDLIM2-205ENST00000397761 ADH1CP00326 375 aa19.78■□□□□ 0.76
PDLIM2-205ENST00000397761 TSHRP16473 764 aa19.78■□□□□ 0.76
PDLIM2-205ENST00000397761 SLC29A2Q14542 456 aa19.78■□□□□ 0.76
PDLIM2-205ENST00000397761 DMC1Q14565 340 aa19.78■□□□□ 0.76
PDLIM2-205ENST00000397761 PDGFRLQ15198 375 aa19.78■□□□□ 0.76
PDLIM2-205ENST00000397761 CYTH1Q15438 398 aa19.78■□□□□ 0.76
PDLIM2-205ENST00000397761 BBS9Q3SYG4 887 aa19.78■□□□□ 0.76
PDLIM2-205ENST00000397761 DNAJC21Q5F1R6 531 aaKnown RBP19.78■□□□□ 0.76
PDLIM2-205ENST00000397761 PITRM1Q5JRX3 1037 aa19.78■□□□□ 0.76
PDLIM2-205ENST00000397761 NAPEPLDQ6IQ20 393 aa19.78■□□□□ 0.76
PDLIM2-205ENST00000397761 RETSATQ6NUM9 610 aa19.78■□□□□ 0.76
PDLIM2-205ENST00000397761 LINC00523Q86TU6 105 aa19.78■□□□□ 0.76
PDLIM2-205ENST00000397761 MFSD6LQ8IWD5 586 aa19.78■□□□□ 0.76
PDLIM2-205ENST00000397761 ATP2A3Q93084 1043 aa19.78■□□□□ 0.76
PDLIM2-205ENST00000397761 ABCB8Q9NUT2 735 aa19.78■□□□□ 0.76
PDLIM2-205ENST00000397761 THG1LQ9NWX6 298 aaKnown RBP19.78■□□□□ 0.76
PDLIM2-205ENST00000397761 FAM53CQ9NYF3 392 aa19.78■□□□□ 0.76
PDLIM2-205ENST00000397761 PLAAQ9Y263 795 aa19.78■□□□□ 0.76
PDLIM2-205ENST00000397761 TTLL3Q9Y4R7 772 aa19.78■□□□□ 0.76
PDLIM2-205ENST00000397761 ACTL7AQ9Y615 435 aa19.78■□□□□ 0.76
PDLIM2-205ENST00000397761 NFATC1O95644 943 aa19.77■□□□□ 0.76
PDLIM2-205ENST00000397761 IGFBP4P22692 258 aa19.77■□□□□ 0.76
PDLIM2-205ENST00000397761 CES1P23141 567 aa19.77■□□□□ 0.76
PDLIM2-205ENST00000397761 ELK3P41970 407 aa19.77■□□□□ 0.76
PDLIM2-205ENST00000397761 MAXP61244 160 aa19.77■□□□□ 0.76
PDLIM2-205ENST00000397761 DSC2Q02487 901 aa19.77■□□□□ 0.76
PDLIM2-205ENST00000397761 SLC20A2Q08357 652 aa19.77■□□□□ 0.76
PDLIM2-205ENST00000397761 SPARCL1Q14515 664 aa19.77■□□□□ 0.76
PDLIM2-205ENST00000397761 GAB4Q2WGN9 574 aa19.77■□□□□ 0.76
PDLIM2-205ENST00000397761 DENND2CQ68D51 928 aa19.77■□□□□ 0.76
PDLIM2-205ENST00000397761 MTERF4Q7Z6M4 381 aaKnown RBP19.77■□□□□ 0.76
PDLIM2-205ENST00000397761 METTL3Q86U44 580 aaKnown RBP19.77■□□□□ 0.76
PDLIM2-205ENST00000397761 IGDCC3Q8IVU1 814 aa19.77■□□□□ 0.76
PDLIM2-205ENST00000397761 ELSPBP1Q96BH3 223 aa19.77■□□□□ 0.76
PDLIM2-205ENST00000397761 MRGPRX2Q96LB1 330 aa19.77■□□□□ 0.76
PDLIM2-205ENST00000397761 CINPQ9BW66 212 aaPredicted RBP19.77■□□□□ 0.76
PDLIM2-205ENST00000397761 ACBD3Q9H3P7 528 aa19.77■□□□□ 0.76
PDLIM2-205ENST00000397761 LRRC4CQ9HCJ2 640 aa19.77■□□□□ 0.76
PDLIM2-205ENST00000397761 MUC22E2RYF6 1773 aaPredicted RBP19.76■□□□□ 0.75
PDLIM2-205ENST00000397761 AP3B1O00203 1094 aa19.76■□□□□ 0.75
PDLIM2-205ENST00000397761 TMCC1O94876 653 aa19.76■□□□□ 0.75
PDLIM2-205ENST00000397761 ADH5P11766 374 aa19.76■□□□□ 0.75
PDLIM2-205ENST00000397761 PABPC1P11940 636 aaKnown RBP19.76■□□□□ 0.75
PDLIM2-205ENST00000397761 SERPINH1P50454 418 aaKnown RBP19.76■□□□□ 0.75
PDLIM2-205ENST00000397761 SKOR1P84550 965 aa19.76■□□□□ 0.75
PDLIM2-205ENST00000397761 NSUN2Q08J23 767 aaKnown RBP eCLIP19.76■□□□□ 0.75
PDLIM2-205ENST00000397761 FUT11Q495W5 492 aa19.76■□□□□ 0.75
PDLIM2-205ENST00000397761 TRIM68Q6AZZ1 485 aa19.76■□□□□ 0.75
PDLIM2-205ENST00000397761 RANBP10Q6VN20 620 aa19.76■□□□□ 0.75
PDLIM2-205ENST00000397761 ETFBKMTQ8IXQ9 262 aa19.76■□□□□ 0.75
PDLIM2-205ENST00000397761 FBXO36Q8NEA4 188 aa19.76■□□□□ 0.75
PDLIM2-205ENST00000397761 PYROXD1Q8WU10 500 aa19.76■□□□□ 0.75
PDLIM2-205ENST00000397761 GAS2L1Q99501 681 aaPredicted RBP19.76■□□□□ 0.75
PDLIM2-205ENST00000397761 CDX2Q99626 313 aaPredicted RBP19.76■□□□□ 0.75
PDLIM2-205ENST00000397761 SEMA3CQ99985 751 aa19.76■□□□□ 0.75
PDLIM2-205ENST00000397761 TMEM109Q9BVC6 243 aa19.76■□□□□ 0.75
PDLIM2-205ENST00000397761 ARNT2Q9HBZ2 717 aa19.76■□□□□ 0.75
PDLIM2-205ENST00000397761 UBP1Q9NZI7 540 aa19.76■□□□□ 0.75
PDLIM2-205ENST00000397761 EPS15L1Q9UBC2 864 aa19.76■□□□□ 0.75
PDLIM2-205ENST00000397761 LHX3Q9UBR4 397 aa19.76■□□□□ 0.75
PDLIM2-205ENST00000397761 CD207Q9UJ71 328 aa19.76■□□□□ 0.75
PDLIM2-205ENST00000397761 GGA2Q9UJY4 613 aa19.76■□□□□ 0.75
PDLIM2-205ENST00000397761 TICRRQ7Z2Z1 1910 aa19.76■□□□□ 0.75
PDLIM2-205ENST00000397761 SDR42E2A6NKP2 422 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms