RNA–Protein interactions for RNA: ENST00000396653.2

AP1S3-202, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4 BASIC

Gene AP1S3, Length 589 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-202ENST00000396653 FANCMQ8IYD8 2048 aa16.69■□□□□ 0.26
AP1S3-202ENST00000396653 CTAGE9A4FU28 777 aa16.69■□□□□ 0.26
AP1S3-202ENST00000396653 ZBTB24O43167 697 aaPredicted RBP16.69■□□□□ 0.26
AP1S3-202ENST00000396653 GALR2O43603 387 aaPredicted RBP16.69■□□□□ 0.26
AP1S3-202ENST00000396653 CEP104O60308 925 aa16.69■□□□□ 0.26
AP1S3-202ENST00000396653 IGSF6O95976 241 aa16.69■□□□□ 0.26
AP1S3-202ENST00000396653 TDGF1P13385 188 aa16.69■□□□□ 0.26
AP1S3-202ENST00000396653 VAV1P15498 845 aa16.69■□□□□ 0.26
AP1S3-202ENST00000396653 CSNK1DP48730 415 aa16.69■□□□□ 0.26
AP1S3-202ENST00000396653 IFI35P80217 286 aaPredicted RBP16.69■□□□□ 0.26
AP1S3-202ENST00000396653 SLC10A7Q0GE19 358 aa16.69■□□□□ 0.26
AP1S3-202ENST00000396653 ZNF235Q14590 738 aa16.69■□□□□ 0.26
AP1S3-202ENST00000396653 ZNF528Q3MIS6 628 aa16.69■□□□□ 0.26
AP1S3-202ENST00000396653 SLC45A4Q5BKX6 768 aa16.69■□□□□ 0.26
AP1S3-202ENST00000396653 MARC1Q5VT66 337 aa16.69■□□□□ 0.26
AP1S3-202ENST00000396653 ZNF776Q68DI1 518 aaPredicted RBP16.69■□□□□ 0.26
AP1S3-202ENST00000396653 LEKR1Q6ZMV7 388 aa16.69■□□□□ 0.26
AP1S3-202ENST00000396653 NYAP1Q6ZVC0 841 aa16.69■□□□□ 0.26
AP1S3-202ENST00000396653 DSG4Q86SJ6 1040 aa16.69■□□□□ 0.26
AP1S3-202ENST00000396653 CDKL3Q8IVW4 592 aaPredicted RBP16.69■□□□□ 0.26
AP1S3-202ENST00000396653 MAML2Q8IZL2 1156 aaPredicted RBP16.69■□□□□ 0.26
AP1S3-202ENST00000396653 OR2A12Q8NGT7 310 aa16.69■□□□□ 0.26
AP1S3-202ENST00000396653 LGMNQ99538 433 aa16.69■□□□□ 0.26
AP1S3-202ENST00000396653 PRRX2Q99811 253 aa16.69■□□□□ 0.26
AP1S3-202ENST00000396653 FAM126AQ9BYI3 521 aaPredicted RBP16.69■□□□□ 0.26
AP1S3-202ENST00000396653 MTG2Q9H4K7 406 aa16.69■□□□□ 0.26
AP1S3-202ENST00000396653 RNASEH1O60930 286 aaKnown RBP16.68■□□□□ 0.26
AP1S3-202ENST00000396653 CCNB1P14635 433 aa16.68■□□□□ 0.26
AP1S3-202ENST00000396653 GABRG2P18507 467 aa16.68■□□□□ 0.26
AP1S3-202ENST00000396653 CXCR5P32302 372 aa16.68■□□□□ 0.26
AP1S3-202ENST00000396653 MMP13P45452 471 aa16.68■□□□□ 0.26
AP1S3-202ENST00000396653 CCNHP51946 323 aaPredicted RBP16.68■□□□□ 0.26
AP1S3-202ENST00000396653 EIF3EP60228 445 aaKnown RBP16.68■□□□□ 0.26
AP1S3-202ENST00000396653 ZBTB16Q05516 673 aa16.68■□□□□ 0.26
AP1S3-202ENST00000396653 NSUN2Q08J23 767 aaKnown RBP eCLIP16.68■□□□□ 0.26
AP1S3-202ENST00000396653 AP1B1Q10567 949 aa16.68■□□□□ 0.26
AP1S3-202ENST00000396653 RALGPS1Q5JS13 557 aa16.68■□□□□ 0.26
AP1S3-202ENST00000396653 ALG1LQ6GMV1 187 aa16.68■□□□□ 0.26
AP1S3-202ENST00000396653 STK40Q8N2I9 435 aa16.68■□□□□ 0.26
AP1S3-202ENST00000396653 LRIG1Q96JA1 1093 aa16.68■□□□□ 0.26
AP1S3-202ENST00000396653 MRGPRX1Q96LB2 322 aa16.68■□□□□ 0.26
AP1S3-202ENST00000396653 FAM129BQ96TA1 746 aa16.68■□□□□ 0.26
AP1S3-202ENST00000396653 IL12RB2Q99665 862 aa16.68■□□□□ 0.26
AP1S3-202ENST00000396653 MGME1Q9BQP7 344 aa16.68■□□□□ 0.26
AP1S3-202ENST00000396653 TM6SF2Q9BZW4 377 aa16.68■□□□□ 0.26
AP1S3-202ENST00000396653 TNKS2Q9H2K2 1166 aa16.68■□□□□ 0.26
AP1S3-202ENST00000396653 POLR3BQ9NW08 1133 aaPredicted RBP16.68■□□□□ 0.26
AP1S3-202ENST00000396653 SCML1Q9UN30 329 aa16.68■□□□□ 0.26
AP1S3-202ENST00000396653 TCRBV7S2A1N4TA0A589 114 aa16.67■□□□□ 0.26
AP1S3-202ENST00000396653 FGGP02679 453 aa16.67■□□□□ 0.26
AP1S3-202ENST00000396653 PRNPP04156 253 aa16.67■□□□□ 0.26
AP1S3-202ENST00000396653 TUBB4AP04350 444 aa16.67■□□□□ 0.26
AP1S3-202ENST00000396653 RBP3P10745 1247 aa16.67■□□□□ 0.26
AP1S3-202ENST00000396653 NDUFV2P19404 249 aa16.67■□□□□ 0.26
AP1S3-202ENST00000396653 MAPK8P45983 427 aa16.67■□□□□ 0.26
AP1S3-202ENST00000396653 NRLP54845 237 aa16.67■□□□□ 0.26
AP1S3-202ENST00000396653 GRM3Q14832 879 aa16.67■□□□□ 0.26
AP1S3-202ENST00000396653 ANO7Q6IWH7 933 aa16.67■□□□□ 0.26
AP1S3-202ENST00000396653 DPY19L3Q6ZPD9 716 aa16.67■□□□□ 0.26
AP1S3-202ENST00000396653 ZC3H18Q86VM9 953 aaKnown RBP16.67■□□□□ 0.26
AP1S3-202ENST00000396653 TMPRSS6Q8IU80 811 aa16.67■□□□□ 0.26
AP1S3-202ENST00000396653 TSEN2Q8NCE0 465 aaKnown RBP16.67■□□□□ 0.26
AP1S3-202ENST00000396653 TMIEQ8NEW7 156 aa16.67■□□□□ 0.26
AP1S3-202ENST00000396653 MDGA1Q8NFP4 955 aa16.67■□□□□ 0.26
AP1S3-202ENST00000396653 SLC35B2Q8TB61 432 aa16.67■□□□□ 0.26
AP1S3-202ENST00000396653 ACTRT1Q8TDG2 376 aa16.67■□□□□ 0.26
AP1S3-202ENST00000396653 PRCCQ92733 491 aaPredicted RBP16.67■□□□□ 0.26
AP1S3-202ENST00000396653 NELL1Q92832 810 aa16.67■□□□□ 0.26
AP1S3-202ENST00000396653 NAP1L3Q99457 506 aaPredicted RBP16.67■□□□□ 0.26
AP1S3-202ENST00000396653 VAT1Q99536 393 aa16.67■□□□□ 0.26
AP1S3-202ENST00000396653 FERMT1Q9BQL6 677 aa16.67■□□□□ 0.26
AP1S3-202ENST00000396653 HEPHQ9BQS7 1158 aa16.67■□□□□ 0.26
AP1S3-202ENST00000396653 MKRN2Q9H000 416 aaKnown RBP16.67■□□□□ 0.26
AP1S3-202ENST00000396653 BCLAF3A2AJT9 711 aaKnown RBP16.66■□□□□ 0.26
AP1S3-202ENST00000396653 C1QTNF3-AMACRE9PGA6 284 aa16.66■□□□□ 0.26
AP1S3-202ENST00000396653 H7C0C1 242 aa16.66■□□□□ 0.26
AP1S3-202ENST00000396653 KIF2AO00139 706 aaPredicted RBP16.66■□□□□ 0.26
AP1S3-202ENST00000396653 PGRMC1O00264 195 aaKnown RBP16.66■□□□□ 0.26
AP1S3-202ENST00000396653 FANCGO15287 622 aa16.66■□□□□ 0.26
AP1S3-202ENST00000396653 POP4O95707 220 aaKnown RBP16.66■□□□□ 0.26
AP1S3-202ENST00000396653 ADH1BP00325 375 aa16.66■□□□□ 0.26
AP1S3-202ENST00000396653 CR2P20023 1033 aa16.66■□□□□ 0.26
AP1S3-202ENST00000396653 CHRNA3P32297 505 aa16.66■□□□□ 0.26
AP1S3-202ENST00000396653 ATP5OP48047 213 aa16.66■□□□□ 0.26
AP1S3-202ENST00000396653 AP1S1P61966 158 aa16.66■□□□□ 0.26
AP1S3-202ENST00000396653 RPS14P62263 151 aaKnown RBP16.66■□□□□ 0.26
AP1S3-202ENST00000396653 RAD51Q06609 339 aa16.66■□□□□ 0.26
AP1S3-202ENST00000396653 SFSWAPQ12872 951 aaKnown RBP16.66■□□□□ 0.26
AP1S3-202ENST00000396653 ANGPT1Q15389 498 aa16.66■□□□□ 0.26
AP1S3-202ENST00000396653 SIX1Q15475 284 aaPredicted RBP16.66■□□□□ 0.26
AP1S3-202ENST00000396653 CST6Q15828 149 aa16.66■□□□□ 0.26
AP1S3-202ENST00000396653 LONRF2Q1L5Z9 754 aa16.66■□□□□ 0.26
AP1S3-202ENST00000396653 FAM46CQ5VWP2 391 aa16.66■□□□□ 0.26
AP1S3-202ENST00000396653 HEATR6Q6AI08 1181 aaKnown RBP16.66■□□□□ 0.26
AP1S3-202ENST00000396653 COG1Q8WTW3 980 aa16.66■□□□□ 0.26
AP1S3-202ENST00000396653 HMGB4Q8WW32 186 aa16.66■□□□□ 0.26
AP1S3-202ENST00000396653 SIPA1Q96FS4 1042 aa16.66■□□□□ 0.26
AP1S3-202ENST00000396653 ZNF419Q96HQ0 510 aaPredicted RBP16.66■□□□□ 0.26
AP1S3-202ENST00000396653 NUDCD1Q96RS6 583 aa16.66■□□□□ 0.26
AP1S3-202ENST00000396653 TUBGCP5Q96RT8 1024 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms