RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 LGI2Q8N0V4 545 aa16.37■□□□□ 0.21
SNX6-202ENST00000396526 TOX2Q96NM4 488 aa16.37■□□□□ 0.21
SNX6-202ENST00000396526 ARHGEF3Q9NR81 526 aa16.37■□□□□ 0.21
SNX6-202ENST00000396526 BAIAP2L1Q9UHR4 511 aa16.37■□□□□ 0.21
SNX6-202ENST00000396526 STK38LQ9Y2H1 464 aa16.37■□□□□ 0.21
SNX6-202ENST00000396526 H2AFYO75367 372 aaKnown RBP16.36■□□□□ 0.21
SNX6-202ENST00000396526 IGLV3-27P01718 113 aa16.36■□□□□ 0.21
SNX6-202ENST00000396526 C2P06681 752 aa16.36■□□□□ 0.21
SNX6-202ENST00000396526 RALBP11234 206 aa16.36■□□□□ 0.21
SNX6-202ENST00000396526 SAT1P21673 171 aa16.36■□□□□ 0.21
SNX6-202ENST00000396526 SLC20A2Q08357 652 aa16.36■□□□□ 0.21
SNX6-202ENST00000396526 CMC1Q7Z7K0 106 aa16.36■□□□□ 0.21
SNX6-202ENST00000396526 SLC25A41Q8N5S1 370 aa16.36■□□□□ 0.21
SNX6-202ENST00000396526 IFT43Q96FT9 208 aa16.36■□□□□ 0.21
SNX6-202ENST00000396526 IMP4Q96G21 291 aaKnown RBP16.36■□□□□ 0.21
SNX6-202ENST00000396526 POLR1EQ9GZS1 481 aaKnown RBP16.36■□□□□ 0.21
SNX6-202ENST00000396526 CCSER2Q9H7U1 834 aa16.36■□□□□ 0.21
SNX6-202ENST00000396526 COPG2Q9UBF2 871 aa16.36■□□□□ 0.21
SNX6-202ENST00000396526 FRMPD3Q5JV73 1810 aa16.36■□□□□ 0.21
SNX6-202ENST00000396526 ACSL4O60488 711 aa16.36■□□□□ 0.21
SNX6-202ENST00000396526 PROCP04070 461 aa16.36■□□□□ 0.21
SNX6-202ENST00000396526 TARSP26639 723 aaKnown RBP16.36■□□□□ 0.21
SNX6-202ENST00000396526 ADRA1AP35348 466 aa16.36■□□□□ 0.21
SNX6-202ENST00000396526 TLE2Q04725 743 aa16.36■□□□□ 0.21
SNX6-202ENST00000396526 ASPHQ12797 758 aa16.36■□□□□ 0.21
SNX6-202ENST00000396526 PPM1JQ5JR12 505 aa16.36■□□□□ 0.21
SNX6-202ENST00000396526 TMCO4Q5TGY1 634 aa16.36■□□□□ 0.21
SNX6-202ENST00000396526 TPGS2Q68CL5 300 aa16.36■□□□□ 0.21
SNX6-202ENST00000396526 KIAA0930Q6ICG6 404 aaPredicted RBP16.36■□□□□ 0.21
SNX6-202ENST00000396526 CNKSR3Q6P9H4 555 aa16.36■□□□□ 0.21
SNX6-202ENST00000396526 RSPO2Q6UXX9 243 aaPredicted RBP16.36■□□□□ 0.21
SNX6-202ENST00000396526 IGSF8Q969P0 613 aa16.36■□□□□ 0.21
SNX6-202ENST00000396526 PSMG2Q969U7 264 aa16.36■□□□□ 0.21
SNX6-202ENST00000396526 MRGPRX2Q96LB1 330 aa16.36■□□□□ 0.21
SNX6-202ENST00000396526 NOL6Q9H6R4 1146 aaKnown RBP16.36■□□□□ 0.21
SNX6-202ENST00000396526 ARNT2Q9HBZ2 717 aa16.36■□□□□ 0.21
SNX6-202ENST00000396526 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.36■□□□□ 0.21
SNX6-202ENST00000396526 HAO1Q9UJM8 370 aa16.36■□□□□ 0.21
SNX6-202ENST00000396526 MRPL42Q9Y6G3 142 aaKnown RBP16.36■□□□□ 0.21
SNX6-202ENST00000396526 DNAJC6O75061 913 aa16.35■□□□□ 0.21
SNX6-202ENST00000396526 CCL5P13501 91 aa16.35■□□□□ 0.21
SNX6-202ENST00000396526 KCNA4P22459 653 aa16.35■□□□□ 0.21
SNX6-202ENST00000396526 CD86P42081 329 aa16.35■□□□□ 0.21
SNX6-202ENST00000396526 SLC1A6P48664 564 aa16.35■□□□□ 0.21
SNX6-202ENST00000396526 CNGA3Q16281 694 aa16.35■□□□□ 0.21
SNX6-202ENST00000396526 SLC39A5Q6ZMH5 540 aa16.35■□□□□ 0.21
SNX6-202ENST00000396526 KIAA0408Q6ZU52 694 aa16.35■□□□□ 0.21
SNX6-202ENST00000396526 ZNF683Q8IZ20 524 aa16.35■□□□□ 0.21
SNX6-202ENST00000396526 IGSF21Q96ID5 467 aa16.35■□□□□ 0.21
SNX6-202ENST00000396526 GPR22Q99680 433 aa16.35■□□□□ 0.21
SNX6-202ENST00000396526 ATXN3LQ9H3M9 355 aa16.35■□□□□ 0.21
SNX6-202ENST00000396526 NMRAL1Q9HBL8 299 aa16.35■□□□□ 0.21
SNX6-202ENST00000396526 TMEM216Q9P0N5 145 aa16.35■□□□□ 0.21
SNX6-202ENST00000396526 HSFX1Q9UBD0 423 aa16.35■□□□□ 0.21
SNX6-202ENST00000396526 HCSTQ9UBK5 93 aa16.35■□□□□ 0.21
SNX6-202ENST00000396526 J3KR12 359 aa16.35■□□□□ 0.21
SNX6-202ENST00000396526 COL6A2P12110 1019 aa16.35■□□□□ 0.21
SNX6-202ENST00000396526 DNAJB1P25685 340 aa16.35■□□□□ 0.21
SNX6-202ENST00000396526 SERPINB3P29508 390 aa16.35■□□□□ 0.21
SNX6-202ENST00000396526 SLC8A1P32418 973 aa16.35■□□□□ 0.21
SNX6-202ENST00000396526 PRKAA2P54646 552 aa16.35■□□□□ 0.21
SNX6-202ENST00000396526 SLC10A7Q0GE19 358 aa16.35■□□□□ 0.21
SNX6-202ENST00000396526 TAS1R1Q7RTX1 841 aa16.35■□□□□ 0.21
SNX6-202ENST00000396526 KIF2BQ8N4N8 673 aa16.35■□□□□ 0.21
SNX6-202ENST00000396526 PIWIL2Q8TC59 973 aaKnown RBP16.35■□□□□ 0.21
SNX6-202ENST00000396526 NSL1Q96IY1 281 aa16.35■□□□□ 0.21
SNX6-202ENST00000396526 ZNF599Q96NL3 588 aa16.35■□□□□ 0.21
SNX6-202ENST00000396526 MAGEH1Q9H213 219 aa16.35■□□□□ 0.21
SNX6-202ENST00000396526 LRMDAQ9H2I8 198 aa16.35■□□□□ 0.21
SNX6-202ENST00000396526 CRISPLD1Q9H336 500 aa16.35■□□□□ 0.21
SNX6-202ENST00000396526 ZNF638Q14966 1978 aaKnown RBP16.35■□□□□ 0.21
SNX6-202ENST00000396526 GOLGA8TH3BQL2 631 aa16.35■□□□□ 0.21
SNX6-202ENST00000396526 MGRN1O60291 552 aa16.35■□□□□ 0.21
SNX6-202ENST00000396526 SNNO75324 88 aaPredicted RBP16.35■□□□□ 0.21
SNX6-202ENST00000396526 KITP10721 976 aa16.35■□□□□ 0.21
SNX6-202ENST00000396526 ESRRAP11474 423 aaPredicted RBP16.35■□□□□ 0.21
SNX6-202ENST00000396526 MAGEA12P43365 314 aa16.35■□□□□ 0.21
SNX6-202ENST00000396526 SERINC3Q13530 473 aa16.35■□□□□ 0.21
SNX6-202ENST00000396526 RIPK1Q13546 671 aa16.35■□□□□ 0.21
SNX6-202ENST00000396526 SLC12A1Q13621 1099 aa16.35■□□□□ 0.21
SNX6-202ENST00000396526 LBRQ14739 615 aaKnown RBP16.35■□□□□ 0.21
SNX6-202ENST00000396526 NEPROQ6NW34 567 aa16.35■□□□□ 0.21
SNX6-202ENST00000396526 ESRP1Q6NXG1 681 aaKnown RBP16.35■□□□□ 0.21
SNX6-202ENST00000396526 KLHDC10Q6PID8 442 aa16.35■□□□□ 0.21
SNX6-202ENST00000396526 ZNF461Q8TAF7 563 aa16.35■□□□□ 0.21
SNX6-202ENST00000396526 SCYL1Q96KG9 808 aa16.35■□□□□ 0.21
SNX6-202ENST00000396526 ZNF558Q96NG5 402 aa16.35■□□□□ 0.21
SNX6-202ENST00000396526 KLHL5Q96PQ7 755 aa16.35■□□□□ 0.21
SNX6-202ENST00000396526 STN1Q9H668 368 aaKnown RBP16.35■□□□□ 0.21
SNX6-202ENST00000396526 CYP4F11Q9HBI6 524 aa16.35■□□□□ 0.21
SNX6-202ENST00000396526 ACOT9Q9Y305 439 aa16.35■□□□□ 0.21
SNX6-202ENST00000396526 COL4A4P53420 1690 aaPredicted RBP16.35■□□□□ 0.21
SNX6-202ENST00000396526 PATJQ8NI35 1801 aa16.35■□□□□ 0.21
SNX6-202ENST00000396526 CHUKO15111 745 aa16.34■□□□□ 0.21
SNX6-202ENST00000396526 CRABP2P29373 138 aa16.34■□□□□ 0.21
SNX6-202ENST00000396526 CD151P48509 253 aa16.34■□□□□ 0.21
SNX6-202ENST00000396526 CFAP157Q5JU67 520 aa16.34■□□□□ 0.21
SNX6-202ENST00000396526 DENND5AQ6IQ26 1287 aa16.34■□□□□ 0.21
SNX6-202ENST00000396526 ZC3HC1Q86WB0 502 aaKnown RBP16.34■□□□□ 0.21
SNX6-202ENST00000396526 RDH11Q8TC12 318 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms