RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 POLD3Q15054 466 aaPredicted RBP15.16■□□□□ 0.02
CBX3-202ENST00000396386 PCSK7Q16549 785 aa15.16■□□□□ 0.02
CBX3-202ENST00000396386 UGP2Q16851 508 aa15.16■□□□□ 0.02
CBX3-202ENST00000396386 TAF1BQ53T94 588 aaPredicted RBP15.16■□□□□ 0.02
CBX3-202ENST00000396386 PPM1JQ5JR12 505 aa15.16■□□□□ 0.02
CBX3-202ENST00000396386 CES4AQ5XG92 561 aa15.16■□□□□ 0.02
CBX3-202ENST00000396386 MBLAC2Q68D91 279 aa15.16■□□□□ 0.02
CBX3-202ENST00000396386 KIAA1841Q6NSI8 718 aa15.16■□□□□ 0.02
CBX3-202ENST00000396386 CNKSR3Q6P9H4 555 aa15.16■□□□□ 0.02
CBX3-202ENST00000396386 RANBP10Q6VN20 620 aa15.16■□□□□ 0.02
CBX3-202ENST00000396386 ASRGL1Q7L266 308 aa15.16■□□□□ 0.02
CBX3-202ENST00000396386 CNTN4Q8IWV2 1026 aa15.16■□□□□ 0.02
CBX3-202ENST00000396386 TEX26Q8N6G2 289 aa15.16■□□□□ 0.02
CBX3-202ENST00000396386 PSMG2Q969U7 264 aa15.16■□□□□ 0.02
CBX3-202ENST00000396386 IGSF21Q96ID5 467 aa15.16■□□□□ 0.02
CBX3-202ENST00000396386 KLHL5Q96PQ7 755 aa15.16■□□□□ 0.02
CBX3-202ENST00000396386 GPR22Q99680 433 aa15.16■□□□□ 0.02
CBX3-202ENST00000396386 VN1R3Q9BXE9 311 aa15.16■□□□□ 0.02
CBX3-202ENST00000396386 RHOJQ9H4E5 214 aa15.16■□□□□ 0.02
CBX3-202ENST00000396386 KCNK13Q9HB14 408 aa15.16■□□□□ 0.02
CBX3-202ENST00000396386 KCNK4Q9NYG8 393 aa15.16■□□□□ 0.02
CBX3-202ENST00000396386 CHD5Q8TDI0 1954 aa15.16■□□□□ 0.02
CBX3-202ENST00000396386 A0A096LPK6 155 aa15.16■□□□□ 0.02
CBX3-202ENST00000396386 GOLGA8TH3BQL2 631 aa15.16■□□□□ 0.02
CBX3-202ENST00000396386 GSRP00390 522 aa15.16■□□□□ 0.02
CBX3-202ENST00000396386 F7P08709 466 aaPredicted RBP15.16■□□□□ 0.02
CBX3-202ENST00000396386 TARSP26639 723 aaKnown RBP15.16■□□□□ 0.02
CBX3-202ENST00000396386 ATP5C1P36542 298 aaKnown RBP15.16■□□□□ 0.02
CBX3-202ENST00000396386 ABCG1P45844 678 aa15.16■□□□□ 0.02
CBX3-202ENST00000396386 KCNJ2P63252 427 aa15.16■□□□□ 0.02
CBX3-202ENST00000396386 TLE2Q04725 743 aa15.16■□□□□ 0.02
CBX3-202ENST00000396386 ITKQ08881 620 aa15.16■□□□□ 0.02
CBX3-202ENST00000396386 SLC10A7Q0GE19 358 aa15.16■□□□□ 0.02
CBX3-202ENST00000396386 IKBKEQ14164 716 aa15.16■□□□□ 0.02
CBX3-202ENST00000396386 KIAA0930Q6ICG6 404 aaPredicted RBP15.16■□□□□ 0.02
CBX3-202ENST00000396386 ZCCHC23Q6ZST2 131 aa15.16■□□□□ 0.02
CBX3-202ENST00000396386 CLNKQ7Z7G1 428 aa15.16■□□□□ 0.02
CBX3-202ENST00000396386 MTDHQ86UE4 582 aaKnown RBP15.16■□□□□ 0.02
CBX3-202ENST00000396386 LGI2Q8N0V4 545 aa15.16■□□□□ 0.02
CBX3-202ENST00000396386 SKA1Q96BD8 255 aa15.16■□□□□ 0.02
CBX3-202ENST00000396386 ZNF512Q96ME7 567 aaPredicted RBP15.16■□□□□ 0.02
CBX3-202ENST00000396386 TOX2Q96NM4 488 aa15.16■□□□□ 0.02
CBX3-202ENST00000396386 NACA2Q9H009 215 aa15.16■□□□□ 0.02
CBX3-202ENST00000396386 ARNT2Q9HBZ2 717 aa15.16■□□□□ 0.02
CBX3-202ENST00000396386 ARHGEF3Q9NR81 526 aa15.16■□□□□ 0.02
CBX3-202ENST00000396386 THAP1Q9NVV9 213 aa15.16■□□□□ 0.02
CBX3-202ENST00000396386 TMEM216Q9P0N5 145 aa15.16■□□□□ 0.02
CBX3-202ENST00000396386 HEY2Q9UBP5 337 aa15.16■□□□□ 0.02
CBX3-202ENST00000396386 AFF4Q9UHB7 1163 aaKnown RBP15.16■□□□□ 0.02
CBX3-202ENST00000396386 PLXNA4Q9HCM2 1894 aa15.15■□□□□ 0.02
CBX3-202ENST00000396386 DNAJC6O75061 913 aa15.15■□□□□ 0.02
CBX3-202ENST00000396386 HAUS5O94927 633 aa15.15■□□□□ 0.02
CBX3-202ENST00000396386 SERPINE1P05121 402 aa15.15■□□□□ 0.02
CBX3-202ENST00000396386 PRKCGP05129 697 aa15.15■□□□□ 0.02
CBX3-202ENST00000396386 MYL2P10916 166 aa15.15■□□□□ 0.02
CBX3-202ENST00000396386 FGF3P11487 239 aaPredicted RBP15.15■□□□□ 0.02
CBX3-202ENST00000396386 OR1E1P30953 314 aa15.15■□□□□ 0.02
CBX3-202ENST00000396386 CD86P42081 329 aa15.15■□□□□ 0.02
CBX3-202ENST00000396386 CHRNA4P43681 627 aa15.15■□□□□ 0.02
CBX3-202ENST00000396386 KCNQ1P51787 676 aa15.15■□□□□ 0.02
CBX3-202ENST00000396386 MAXP61244 160 aa15.15■□□□□ 0.02
CBX3-202ENST00000396386 ZBTB16Q05516 673 aa15.15■□□□□ 0.02
CBX3-202ENST00000396386 SERINC3Q13530 473 aa15.15■□□□□ 0.02
CBX3-202ENST00000396386 CLEC14AQ86T13 490 aa15.15■□□□□ 0.02
CBX3-202ENST00000396386 ZC3HC1Q86WB0 502 aaKnown RBP15.15■□□□□ 0.02
CBX3-202ENST00000396386 ARID3BQ8IVW6 561 aaPredicted RBP15.15■□□□□ 0.02
CBX3-202ENST00000396386 KIF2BQ8N4N8 673 aa15.15■□□□□ 0.02
CBX3-202ENST00000396386 FAM167BQ9BTA0 163 aa15.15■□□□□ 0.02
CBX3-202ENST00000396386 LRMDAQ9H2I8 198 aa15.15■□□□□ 0.02
CBX3-202ENST00000396386 CAB39LQ9H9S4 337 aa15.15■□□□□ 0.02
CBX3-202ENST00000396386 ATP13A1Q9HD20 1204 aa15.15■□□□□ 0.02
CBX3-202ENST00000396386 SAR1AQ9NR31 198 aa15.15■□□□□ 0.02
CBX3-202ENST00000396386 ANKRD6Q9Y2G4 727 aa15.15■□□□□ 0.02
CBX3-202ENST00000396386 E2F8A0AVK6 867 aa15.14■□□□□ 0.01
CBX3-202ENST00000396386 HEATR9A2RTY3 570 aa15.14■□□□□ 0.01
CBX3-202ENST00000396386 ACSL4O60488 711 aa15.14■□□□□ 0.01
CBX3-202ENST00000396386 HNRNPCL1O60812 293 aaKnown RBP15.14■□□□□ 0.01
CBX3-202ENST00000396386 SIN3BO75182 1162 aa15.14■□□□□ 0.01
CBX3-202ENST00000396386 VAPBO95292 243 aa15.14■□□□□ 0.01
CBX3-202ENST00000396386 DSC2Q02487 901 aa15.14■□□□□ 0.01
CBX3-202ENST00000396386 THOC5Q13769 683 aaKnown RBP15.14■□□□□ 0.01
CBX3-202ENST00000396386 LBRQ14739 615 aaKnown RBP15.14■□□□□ 0.01
CBX3-202ENST00000396386 GRM3Q14832 879 aa15.14■□□□□ 0.01
CBX3-202ENST00000396386 TMCO4Q5TGY1 634 aa15.14■□□□□ 0.01
CBX3-202ENST00000396386 SNX30Q5VWJ9 437 aa15.14■□□□□ 0.01
CBX3-202ENST00000396386 ESRP1Q6NXG1 681 aaKnown RBP15.14■□□□□ 0.01
CBX3-202ENST00000396386 KDELC2Q7Z4H8 507 aa15.14■□□□□ 0.01
CBX3-202ENST00000396386 PARP9Q8IXQ6 854 aa15.14■□□□□ 0.01
CBX3-202ENST00000396386 SLC25A41Q8N5S1 370 aa15.14■□□□□ 0.01
CBX3-202ENST00000396386 INPP5DQ92835 1189 aa15.14■□□□□ 0.01
CBX3-202ENST00000396386 RAB3IPQ96QF0 476 aaPredicted RBP15.14■□□□□ 0.01
CBX3-202ENST00000396386 RANBP9Q96S59 729 aa15.14■□□□□ 0.01
CBX3-202ENST00000396386 WWP1Q9H0M0 922 aa15.14■□□□□ 0.01
CBX3-202ENST00000396386 ATXN3LQ9H3M9 355 aa15.14■□□□□ 0.01
CBX3-202ENST00000396386 TREX1Q9NSU2 369 aa15.14■□□□□ 0.01
CBX3-202ENST00000396386 HSFX1Q9UBD0 423 aa15.14■□□□□ 0.01
CBX3-202ENST00000396386 COPG2Q9UBF2 871 aa15.14■□□□□ 0.01
CBX3-202ENST00000396386 MID2Q9UJV3 735 aa15.14■□□□□ 0.01
CBX3-202ENST00000396386 SLC39A10Q9ULF5 831 aa15.14■□□□□ 0.01
CBX3-202ENST00000396386 TRIM33Q9UPN9 1127 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms