RNA–Protein interactions for RNA: ENST00000396172.5

DDX39B-202, Transcript of DExD-box helicase 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39B, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-202ENST00000396172 MYLKQ15746 1914 aa10.04□□□□□ -0.8
DDX39B-202ENST00000396172 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.04□□□□□ -0.8
DDX39B-202ENST00000396172 SMAPO00193 183 aa10.04□□□□□ -0.8
DDX39B-202ENST00000396172 TTI1O43156 1089 aa10.04□□□□□ -0.8
DDX39B-202ENST00000396172 RAD51CO43502 376 aa10.04□□□□□ -0.8
DDX39B-202ENST00000396172 NARSO43776 548 aaKnown RBP10.04□□□□□ -0.8
DDX39B-202ENST00000396172 IGSF6O95976 241 aa10.04□□□□□ -0.8
DDX39B-202ENST00000396172 PEX11BO96011 259 aa10.04□□□□□ -0.8
DDX39B-202ENST00000396172 GSRP00390 522 aa10.04□□□□□ -0.8
DDX39B-202ENST00000396172 JCHAINP01591 159 aa10.04□□□□□ -0.8
DDX39B-202ENST00000396172 BMP1P13497 986 aa10.04□□□□□ -0.8
DDX39B-202ENST00000396172 CA4P22748 312 aa10.04□□□□□ -0.8
DDX39B-202ENST00000396172 GLDCP23378 1020 aa10.04□□□□□ -0.8
DDX39B-202ENST00000396172 PTGIRP43119 386 aa10.04□□□□□ -0.8
DDX39B-202ENST00000396172 TNNT3P45378 269 aaPredicted RBP10.04□□□□□ -0.8
DDX39B-202ENST00000396172 RECQLP46063 649 aaPredicted RBP10.04□□□□□ -0.8
DDX39B-202ENST00000396172 LMAN1P49257 510 aa10.04□□□□□ -0.8
DDX39B-202ENST00000396172 GDF10P55107 478 aa10.04□□□□□ -0.8
DDX39B-202ENST00000396172 RHOAP61586 193 aa10.04□□□□□ -0.8
DDX39B-202ENST00000396172 SNRPD1P62314 119 aaKnown RBP10.04□□□□□ -0.8
DDX39B-202ENST00000396172 WASHC5Q12768 1159 aa10.04□□□□□ -0.8
DDX39B-202ENST00000396172 ZBTB17Q13105 803 aa10.04□□□□□ -0.8
DDX39B-202ENST00000396172 GRM3Q14832 879 aa10.04□□□□□ -0.8
DDX39B-202ENST00000396172 SLC44A4Q53GD3 710 aa10.04□□□□□ -0.8
DDX39B-202ENST00000396172 ALG1LQ6GMV1 187 aa10.04□□□□□ -0.8
DDX39B-202ENST00000396172 C22orf39Q6P5X5 142 aa10.04□□□□□ -0.8
DDX39B-202ENST00000396172 ZNF852Q6ZMS4 543 aa10.04□□□□□ -0.8
DDX39B-202ENST00000396172 PID1Q7Z2X4 250 aa10.04□□□□□ -0.8
DDX39B-202ENST00000396172 HDXQ7Z353 690 aa10.04□□□□□ -0.8
DDX39B-202ENST00000396172 ZNF567Q8N184 647 aa10.04□□□□□ -0.8
DDX39B-202ENST00000396172 NOA1Q8NC60 698 aaKnown RBP10.04□□□□□ -0.8
DDX39B-202ENST00000396172 GDAP1L1Q96MZ0 367 aa10.04□□□□□ -0.8
DDX39B-202ENST00000396172 MGME1Q9BQP7 344 aa10.04□□□□□ -0.8
DDX39B-202ENST00000396172 NT5MQ9NPB1 228 aa10.04□□□□□ -0.8
DDX39B-202ENST00000396172 ARHGEF3Q9NR81 526 aa10.04□□□□□ -0.8
DDX39B-202ENST00000396172 RSPH14Q9UHP6 348 aa10.04□□□□□ -0.8
DDX39B-202ENST00000396172 FBXL21Q9UKT6 434 aa10.04□□□□□ -0.8
DDX39B-202ENST00000396172 ATP8A1Q9Y2Q0 1164 aa10.04□□□□□ -0.8
DDX39B-202ENST00000396172 STARD13Q9Y3M8 1113 aa10.04□□□□□ -0.8
DDX39B-202ENST00000396172 FARP1Q9Y4F1 1045 aaPredicted RBP10.04□□□□□ -0.8
DDX39B-202ENST00000396172 SPTBN5Q9NRC6 3674 aaKnown RBP10.04□□□□□ -0.8
DDX39B-202ENST00000396172 ERI2A8K979 691 aaKnown RBP10.03□□□□□ -0.8
DDX39B-202ENST00000396172 VGLL3A8MV65 326 aa10.03□□□□□ -0.8
DDX39B-202ENST00000396172 PSMD3O43242 534 aa10.03□□□□□ -0.8
DDX39B-202ENST00000396172 ATP9BO43861 1147 aa10.03□□□□□ -0.8
DDX39B-202ENST00000396172 ANXA9O76027 345 aa10.03□□□□□ -0.8
DDX39B-202ENST00000396172 HEXIM1O94992 359 aaKnown RBP10.03□□□□□ -0.8
DDX39B-202ENST00000396172 HLA-DQB2P05538 268 aa10.03□□□□□ -0.8
DDX39B-202ENST00000396172 SRCP12931 536 aa10.03□□□□□ -0.8
DDX39B-202ENST00000396172 MCM3P25205 808 aa10.03□□□□□ -0.8
DDX39B-202ENST00000396172 SOX9P48436 509 aa10.03□□□□□ -0.8
DDX39B-202ENST00000396172 GALK1P51570 392 aa10.03□□□□□ -0.8
DDX39B-202ENST00000396172 VSNL1P62760 191 aa10.03□□□□□ -0.8
DDX39B-202ENST00000396172 RAD51Q06609 339 aa10.03□□□□□ -0.8
DDX39B-202ENST00000396172 NSUN2Q08J23 767 aaKnown RBP eCLIP10.03□□□□□ -0.8
DDX39B-202ENST00000396172 SLC10A7Q0GE19 358 aa10.03□□□□□ -0.8
DDX39B-202ENST00000396172 LRRC32Q14392 662 aa10.03□□□□□ -0.8
DDX39B-202ENST00000396172 PARP6Q2NL67 630 aa10.03□□□□□ -0.8
DDX39B-202ENST00000396172 HSF5Q4G112 596 aaPredicted RBP10.03□□□□□ -0.8
DDX39B-202ENST00000396172 FNDC3BQ53EP0 1204 aaKnown RBP10.03□□□□□ -0.8
DDX39B-202ENST00000396172 TMEM196Q5HYL7 178 aa10.03□□□□□ -0.8
DDX39B-202ENST00000396172 TJAP1Q5JTD0 557 aa10.03□□□□□ -0.8
DDX39B-202ENST00000396172 RNF135Q8IUD6 432 aa10.03□□□□□ -0.8
DDX39B-202ENST00000396172 PLPP6Q8IY26 295 aa10.03□□□□□ -0.8
DDX39B-202ENST00000396172 USP33Q8TEY7 942 aa10.03□□□□□ -0.8
DDX39B-202ENST00000396172 FAM3CQ92520 227 aa10.03□□□□□ -0.8
DDX39B-202ENST00000396172 CHFRQ96EP1 664 aa10.03□□□□□ -0.8
DDX39B-202ENST00000396172 AGAP3Q96P47 875 aa10.03□□□□□ -0.8
DDX39B-202ENST00000396172 ERP44Q9BS26 406 aa10.03□□□□□ -0.8
DDX39B-202ENST00000396172 ACBD3Q9H3P7 528 aa10.03□□□□□ -0.8
DDX39B-202ENST00000396172 VPS45Q9NRW7 570 aa10.03□□□□□ -0.8
DDX39B-202ENST00000396172 AAR2Q9Y312 384 aaKnown RBP10.03□□□□□ -0.8
DDX39B-202ENST00000396172 TTLL3Q9Y4R7 772 aa10.03□□□□□ -0.8
DDX39B-202ENST00000396172 TARSL2A2RTX5 802 aaKnown RBP10.03□□□□□ -0.8
DDX39B-202ENST00000396172 HNRNPLP14866 589 aaKnown RBP eCLIP10.03□□□□□ -0.8
DDX39B-202ENST00000396172 CSNK1DP48730 415 aa10.03□□□□□ -0.8
DDX39B-202ENST00000396172 GEMP55040 296 aa10.03□□□□□ -0.8
DDX39B-202ENST00000396172 AP1S1P61966 158 aa10.03□□□□□ -0.8
DDX39B-202ENST00000396172 ITKQ08881 620 aa10.03□□□□□ -0.8
DDX39B-202ENST00000396172 GPS1Q13098 491 aa10.03□□□□□ -0.8
DDX39B-202ENST00000396172 CALCOCO2Q13137 446 aa10.03□□□□□ -0.8
DDX39B-202ENST00000396172 PON2Q15165 354 aa10.03□□□□□ -0.8
DDX39B-202ENST00000396172 DGKKQ5KSL6 1271 aa10.03□□□□□ -0.8
DDX39B-202ENST00000396172 TMEM215Q68D42 235 aa10.03□□□□□ -0.8
DDX39B-202ENST00000396172 LINGO4Q6UY18 593 aa10.03□□□□□ -0.8
DDX39B-202ENST00000396172 GJD3Q8N144 294 aa10.03□□□□□ -0.8
DDX39B-202ENST00000396172 CCDC110Q8TBZ0 833 aa10.03□□□□□ -0.8
DDX39B-202ENST00000396172 ZBTB9Q96C00 473 aa10.03□□□□□ -0.8
DDX39B-202ENST00000396172 SNF8Q96H20 258 aa10.03□□□□□ -0.8
DDX39B-202ENST00000396172 LRRC1Q9BTT6 524 aa10.03□□□□□ -0.8
DDX39B-202ENST00000396172 SLC25A51Q9H1U9 297 aa10.03□□□□□ -0.8
DDX39B-202ENST00000396172 GLOD4Q9HC38 313 aa10.03□□□□□ -0.8
DDX39B-202ENST00000396172 FAM114A2Q9NRY5 505 aa10.03□□□□□ -0.8
DDX39B-202ENST00000396172 VPS18Q9P253 973 aa10.03□□□□□ -0.8
DDX39B-202ENST00000396172 THAP10Q9P2Z0 257 aaPredicted RBP10.03□□□□□ -0.8
DDX39B-202ENST00000396172 NEU2Q9Y3R4 380 aa10.03□□□□□ -0.8
DDX39B-202ENST00000396172 EDDM13A0A1B0GTR0 161 aa10.02□□□□□ -0.81
DDX39B-202ENST00000396172 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.02□□□□□ -0.81
DDX39B-202ENST00000396172 PRRT4C9JH25 899 aa10.02□□□□□ -0.81
DDX39B-202ENST00000396172 E7EVH7 732 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms