RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 TNK2Q07912 1038 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 TOP3AQ13472 1001 aaPredicted RBP5.52□□□□□ -1.53
VPS13C-204ENST00000395898 DGKKQ5KSL6 1271 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 ZNF513Q8N8E2 541 aaPredicted RBP5.52□□□□□ -1.53
VPS13C-204ENST00000395898 TEKT5Q96M29 485 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 DUSP9Q99956 384 aaKnown RBP5.52□□□□□ -1.53
VPS13C-204ENST00000395898 FAM124BQ9H5Z6 455 aaPredicted RBP5.52□□□□□ -1.53
VPS13C-204ENST00000395898 LRRC19Q9H756 370 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 C8orf4Q9NR00 106 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 GGA2Q9UJY4 613 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 SIK3Q9Y2K2 1263 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 FAM25AB3EWG3 89 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 FAM25CB3EWG5 89 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 FAM25GB3EWG6 89 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 CYP7B1O75881 506 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 FGF19O95750 216 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 SNRPB2P08579 225 aaKnown RBP5.52□□□□□ -1.53
VPS13C-204ENST00000395898 LTA4HP09960 611 aaKnown RBP5.52□□□□□ -1.53
VPS13C-204ENST00000395898 FMO4P31512 558 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 ADCYAP1R1P41586 468 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 RPL14P50914 215 aaKnown RBP5.52□□□□□ -1.53
VPS13C-204ENST00000395898 ADAMTSL2Q86TH1 951 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 STK32CQ86UX6 486 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 VSIG10LQ86VR7 867 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 RNF157Q96PX1 679 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 CDRT15Q96T59 188 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 GAD1Q99259 594 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 ZNF184Q99676 751 aaPredicted RBP5.52□□□□□ -1.53
VPS13C-204ENST00000395898 GINS4Q9BRT9 223 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 SAE1Q9UBE0 346 aaPredicted RBP5.52□□□□□ -1.53
VPS13C-204ENST00000395898 C3orf18Q9UK00 162 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 C1QTNF3-AMACRE9PGA6 284 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 SNAP91O60641 907 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 OR6A2O95222 327 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 LGALS2P05162 132 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 TPH1P17752 444 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 ADRA1DP25100 572 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 PSMB9P28065 219 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 PFKFB4Q16877 469 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 WDR59Q6PJI9 974 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 C15orf52Q6ZUT6 534 aaKnown RBP5.52□□□□□ -1.53
VPS13C-204ENST00000395898 R3HCC1LQ7Z5L2 792 aaKnown RBP5.52□□□□□ -1.53
VPS13C-204ENST00000395898 COMMD2Q86X83 199 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 DENND6AQ8IWF6 608 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 DHRSXQ8N5I4 330 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 OR52L1Q8NGH7 329 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 DNAJC1Q96KC8 554 aaKnown RBP5.52□□□□□ -1.53
VPS13C-204ENST00000395898 ACO2Q99798 780 aaKnown RBP5.52□□□□□ -1.53
VPS13C-204ENST00000395898 FAIM2Q9BWQ8 316 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 PRDM8Q9NQV8 689 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 TSPAN3O60637 253 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 NTSP30990 170 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 SMIM11AP58511 58 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 BMPR2Q13873 1038 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 VGLL4Q14135 290 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 CRY1Q16526 586 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 SEMA4DQ92854 862 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 NACC2Q96BF6 587 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 MIEF2Q96C03 454 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 PNMA5Q96PV4 448 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 PDGFDQ9GZP0 370 aaPredicted RBP5.52□□□□□ -1.53
VPS13C-204ENST00000395898 CDHR5Q9HBB8 845 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 ASAH2Q9NR71 780 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 NINJ2Q9NZG7 142 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 NR2E3Q9Y5X4 410 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 SALL3Q9BXA9 1300 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 A0A087WXM4 84 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 C1orf232A0A0U1RR37 186 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 RGSL1A5PLK6 1076 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 ACSL4O60488 711 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 PROCP04070 461 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 CSH1P0DML2 217 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 CSH2P0DML3 217 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 RPA3P35244 121 aaPredicted RBP5.52□□□□□ -1.53
VPS13C-204ENST00000395898 FLT3P36888 993 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 CLK3P49761 638 aaKnown RBP5.52□□□□□ -1.53
VPS13C-204ENST00000395898 CRYBB1P53674 252 aaPredicted RBP5.52□□□□□ -1.53
VPS13C-204ENST00000395898 CNTN2Q02246 1040 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 CATSPERGQ6ZRH7 1159 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 PIWIL4Q7Z3Z4 852 aaKnown RBP5.52□□□□□ -1.53
VPS13C-204ENST00000395898 VN1R5Q7Z5H4 357 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 TRIM63Q969Q1 353 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 SENP6Q9GZR1 1112 aaPredicted RBP5.52□□□□□ -1.53
VPS13C-204ENST00000395898 CNGB3Q9NQW8 809 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 FAM237AA0A1B0GTK4 181 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.51□□□□□ -1.53
VPS13C-204ENST00000395898 TMEM191CA6NGB0 347 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 WWP2O00308 870 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 SLC28A1O00337 649 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 TRUB2O95900 331 aaKnown RBP5.51□□□□□ -1.53
VPS13C-204ENST00000395898 PCSK2P16519 638 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 LBPP18428 481 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 HOXA10P31260 410 aaPredicted RBP5.51□□□□□ -1.53
VPS13C-204ENST00000395898 SOX10P56693 466 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 RAB10P61026 200 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 SULT2A1Q06520 285 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 ACSM2AQ08AH3 577 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 LIPMQ5VYY2 423 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 ACSM2BQ68CK6 577 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 NEPROQ6NW34 567 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms