RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 CHRNB2P17787 502 aa3.43□□□□□ -1.86
VPS13C-203ENST00000395896 NCF2P19878 526 aaPredicted RBP3.43□□□□□ -1.86
VPS13C-203ENST00000395896 GRK3P35626 688 aa3.43□□□□□ -1.86
VPS13C-203ENST00000395896 KRT6CP48668 564 aa3.43□□□□□ -1.86
VPS13C-203ENST00000395896 NRG1Q02297 640 aaPredicted RBP3.43□□□□□ -1.86
VPS13C-203ENST00000395896 C15orf59Q2T9L4 293 aaPredicted RBP3.43□□□□□ -1.86
VPS13C-203ENST00000395896 MRPL10Q7Z7H8 261 aaKnown RBP3.43□□□□□ -1.86
VPS13C-203ENST00000395896 PCDH19Q8TAB3 1148 aa3.43□□□□□ -1.86
VPS13C-203ENST00000395896 TFAP2BQ92481 460 aa3.43□□□□□ -1.86
VPS13C-203ENST00000395896 RTP4Q96DX8 246 aa3.43□□□□□ -1.86
VPS13C-203ENST00000395896 CEP44Q9C0F1 390 aa3.43□□□□□ -1.86
VPS13C-203ENST00000395896 CSNK1G1Q9HCP0 422 aa3.43□□□□□ -1.86
VPS13C-203ENST00000395896 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.43□□□□□ -1.86
VPS13C-203ENST00000395896 RASSF10A6NK89 507 aa3.43□□□□□ -1.86
VPS13C-203ENST00000395896 CBX4O00257 560 aa3.43□□□□□ -1.86
VPS13C-203ENST00000395896 BMP10O95393 424 aa3.43□□□□□ -1.86
VPS13C-203ENST00000395896 ELP6Q0PNE2 266 aa3.43□□□□□ -1.86
VPS13C-203ENST00000395896 TAF10Q12962 218 aa3.43□□□□□ -1.86
VPS13C-203ENST00000395896 DLG3Q92796 817 aa3.43□□□□□ -1.86
VPS13C-203ENST00000395896 SIX4Q9UIU6 781 aa3.43□□□□□ -1.86
VPS13C-203ENST00000395896 MRPS23Q9Y3D9 190 aaKnown RBP3.43□□□□□ -1.86
VPS13C-203ENST00000395896 MTCL1Q9Y4B5 1905 aaKnown RBP3.43□□□□□ -1.86
VPS13C-203ENST00000395896 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.43□□□□□ -1.863e-10■■■■□ 21.5
VPS13C-203ENST00000395896 KLF11O14901 512 aa3.43□□□□□ -1.86
VPS13C-203ENST00000395896 NDST3O95803 873 aa3.43□□□□□ -1.86
VPS13C-203ENST00000395896 CLTBP09497 229 aa3.43□□□□□ -1.86
VPS13C-203ENST00000395896 RAP1GAPP47736 663 aa3.43□□□□□ -1.86
VPS13C-203ENST00000395896 RXRGP48443 463 aa3.43□□□□□ -1.86
VPS13C-203ENST00000395896 HSPA13P48723 471 aa3.43□□□□□ -1.86
VPS13C-203ENST00000395896 GNA12Q03113 381 aa3.43□□□□□ -1.86
VPS13C-203ENST00000395896 RCN2Q14257 317 aa3.43□□□□□ -1.86
VPS13C-203ENST00000395896 IMPG1Q17R60 797 aa3.43□□□□□ -1.86
VPS13C-203ENST00000395896 MROH9Q5TGP6 573 aa3.43□□□□□ -1.86
VPS13C-203ENST00000395896 PM20D1Q6GTS8 502 aa3.43□□□□□ -1.86
VPS13C-203ENST00000395896 TRMT11Q7Z4G4 463 aaKnown RBP3.43□□□□□ -1.86
VPS13C-203ENST00000395896 ZNF276Q8N554 614 aa3.43□□□□□ -1.86
VPS13C-203ENST00000395896 RTL3Q8N8U3 475 aaKnown RBP3.43□□□□□ -1.86
VPS13C-203ENST00000395896 DQX1Q8TE96 717 aaKnown RBP3.43□□□□□ -1.86
VPS13C-203ENST00000395896 CKAP2Q8WWK9 683 aa3.43□□□□□ -1.86
VPS13C-203ENST00000395896 SPATA17Q96L03 361 aa3.43□□□□□ -1.86
VPS13C-203ENST00000395896 APOBEC3GQ9HC16 384 aaKnown RBP3.43□□□□□ -1.86
VPS13C-203ENST00000395896 SCUBE2Q9NQ36 999 aa3.43□□□□□ -1.86
VPS13C-203ENST00000395896 AHSPQ9NZD4 102 aa3.43□□□□□ -1.86
VPS13C-203ENST00000395896 DTLQ9NZJ0 730 aa3.43□□□□□ -1.86
VPS13C-203ENST00000395896 TUBGCP4Q9UGJ1 667 aa3.43□□□□□ -1.86
VPS13C-203ENST00000395896 SALL4Q9UJQ4 1053 aa3.43□□□□□ -1.86
VPS13C-203ENST00000395896 SLC39A10Q9ULF5 831 aa3.43□□□□□ -1.86
VPS13C-203ENST00000395896 ZBTB42B2RXF5 422 aa3.43□□□□□ -1.86
VPS13C-203ENST00000395896 NPC1O15118 1278 aa3.43□□□□□ -1.86
VPS13C-203ENST00000395896 FKBP6O75344 327 aa3.43□□□□□ -1.86
VPS13C-203ENST00000395896 CPA3P15088 417 aa3.43□□□□□ -1.86
VPS13C-203ENST00000395896 ITGB6P18564 788 aa3.43□□□□□ -1.86
VPS13C-203ENST00000395896 PTPN5P54829 565 aa3.43□□□□□ -1.86
VPS13C-203ENST00000395896 SMAD3P84022 425 aaKnown RBP3.43□□□□□ -1.86
VPS13C-203ENST00000395896 CACNB2Q08289 660 aaPredicted RBP3.43□□□□□ -1.86
VPS13C-203ENST00000395896 LRRC74AQ0VAA2 488 aa3.43□□□□□ -1.86
VPS13C-203ENST00000395896 STARD3Q14849 445 aa3.43□□□□□ -1.86
VPS13C-203ENST00000395896 TIGD5Q53EQ6 642 aa3.43□□□□□ -1.86
VPS13C-203ENST00000395896 GRAMD4Q6IC98 578 aa3.43□□□□□ -1.86
VPS13C-203ENST00000395896 METTL2BQ6P1Q9 378 aaKnown RBP3.43□□□□□ -1.86
VPS13C-203ENST00000395896 RGS9BPQ6ZS82 235 aa3.43□□□□□ -1.86
VPS13C-203ENST00000395896 AVL9Q8NBF6 648 aa3.43□□□□□ -1.86
VPS13C-203ENST00000395896 SLC44A1Q8WWI5 657 aa3.43□□□□□ -1.86
VPS13C-203ENST00000395896 CENPIQ92674 756 aaPredicted RBP3.43□□□□□ -1.86
VPS13C-203ENST00000395896 ERP27Q96DN0 273 aa3.43□□□□□ -1.86
VPS13C-203ENST00000395896 HINFPQ9BQA5 517 aa3.43□□□□□ -1.86
VPS13C-203ENST00000395896 OSBPL6Q9BZF3 934 aa3.43□□□□□ -1.86
VPS13C-203ENST00000395896 BLOC1S6Q9UL45 172 aa3.43□□□□□ -1.86
VPS13C-203ENST00000395896 COG5Q9UP83 839 aa3.43□□□□□ -1.86
VPS13C-203ENST00000395896 YJEFN3A6XGL0 299 aa3.43□□□□□ -1.86
VPS13C-203ENST00000395896 PRMT5O14744 637 aaPredicted RBP3.43□□□□□ -1.86
VPS13C-203ENST00000395896 PAGE1O75459 146 aa3.43□□□□□ -1.86
VPS13C-203ENST00000395896 DGKAP23743 735 aa3.43□□□□□ -1.86
VPS13C-203ENST00000395896 HNRNPH2P55795 449 aaKnown RBP3.43□□□□□ -1.86
VPS13C-203ENST00000395896 KRT33BQ14525 404 aa3.43□□□□□ -1.86
VPS13C-203ENST00000395896 PAFAH1B3Q15102 231 aaKnown RBP3.43□□□□□ -1.86
VPS13C-203ENST00000395896 KIAA0930Q6ICG6 404 aaPredicted RBP3.43□□□□□ -1.86
VPS13C-203ENST00000395896 FAM45BPQ6NSW5 357 aa3.43□□□□□ -1.86
VPS13C-203ENST00000395896 BRAT1Q6PJG6 821 aa3.43□□□□□ -1.86
VPS13C-203ENST00000395896 FAM45AQ8TCE6 357 aa3.43□□□□□ -1.86
VPS13C-203ENST00000395896 TCP10LQ8TDR4 215 aa3.43□□□□□ -1.86
VPS13C-203ENST00000395896 MLPHQ9BV36 600 aaPredicted RBP3.43□□□□□ -1.86
VPS13C-203ENST00000395896 TEX12Q9BXU0 123 aa3.43□□□□□ -1.86
VPS13C-203ENST00000395896 CDYLQ9Y232 598 aa3.43□□□□□ -1.86
VPS13C-203ENST00000395896 CCDC78A2IDD5 438 aa3.43□□□□□ -1.86
VPS13C-203ENST00000395896 CDH2P19022 906 aaPredicted RBP3.43□□□□□ -1.86
VPS13C-203ENST00000395896 ATP5F1P24539 256 aaPredicted RBP3.43□□□□□ -1.86
VPS13C-203ENST00000395896 AKT1P31749 480 aa3.43□□□□□ -1.86
VPS13C-203ENST00000395896 ATN1P54259 1190 aaPredicted RBP3.43□□□□□ -1.86
VPS13C-203ENST00000395896 C4orf33Q8N1A6 199 aa3.43□□□□□ -1.86
VPS13C-203ENST00000395896 CCNYL1Q8N7R7 359 aa3.43□□□□□ -1.86
VPS13C-203ENST00000395896 C7orf57Q8NEG2 295 aa3.43□□□□□ -1.86
VPS13C-203ENST00000395896 REPS1Q96D71 796 aa3.43□□□□□ -1.86
VPS13C-203ENST00000395896 MCCC1Q96RQ3 725 aaPredicted RBP3.43□□□□□ -1.86
VPS13C-203ENST00000395896 ACE2Q9BYF1 805 aaPredicted RBP3.43□□□□□ -1.86
VPS13C-203ENST00000395896 FBXO5Q9UKT4 447 aa3.43□□□□□ -1.86
VPS13C-203ENST00000395896 L3MBTL1Q9Y468 752 aa3.43□□□□□ -1.86
VPS13C-203ENST00000395896 SDK2Q58EX2 2172 aa3.43□□□□□ -1.86
VPS13C-203ENST00000395896 LCTP09848 1927 aa3.43□□□□□ -1.86
VPS13C-203ENST00000395896 MYBPHLA2RUH7 354 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms