RNA–Protein interactions for RNA: ENST00000395090.5

RTN1-203, Transcript of reticulon 1, humanhuman

TSL 2 BASIC

Gene RTN1, Length 1,609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-203ENST00000395090 CARSP49589 748 aaKnown RBP11.68□□□□□ -0.54
RTN1-203ENST00000395090 RBM10P98175 930 aaKnown RBP11.68□□□□□ -0.54
RTN1-203ENST00000395090 CYP4F8P98187 520 aa11.68□□□□□ -0.54
RTN1-203ENST00000395090 PPP1R7Q15435 360 aa11.68□□□□□ -0.54
RTN1-203ENST00000395090 LRIT3Q3SXY7 679 aa11.68□□□□□ -0.54
RTN1-203ENST00000395090 FAM133BQ5BKY9 247 aaKnown RBP11.68□□□□□ -0.54
RTN1-203ENST00000395090 AFMIDQ63HM1 303 aa11.68□□□□□ -0.54
RTN1-203ENST00000395090 RWDD4Q6NW29 188 aaKnown RBP11.68□□□□□ -0.54
RTN1-203ENST00000395090 DARS2Q6PI48 645 aaKnown RBP11.68□□□□□ -0.54
RTN1-203ENST00000395090 HTR3DQ70Z44 454 aa11.68□□□□□ -0.54
RTN1-203ENST00000395090 ZC3H18Q86VM9 953 aaKnown RBP11.68□□□□□ -0.54
RTN1-203ENST00000395090 NPWQ8N729 165 aa11.68□□□□□ -0.54
RTN1-203ENST00000395090 RTL3Q8N8U3 475 aaKnown RBP11.68□□□□□ -0.54
RTN1-203ENST00000395090 CCDC89Q8N998 374 aa11.68□□□□□ -0.54
RTN1-203ENST00000395090 CCHCR1Q8TD31 782 aa11.68□□□□□ -0.54
RTN1-203ENST00000395090 CASKIN2Q8WXE0 1202 aa11.68□□□□□ -0.54
RTN1-203ENST00000395090 WBP2Q969T9 261 aa11.68□□□□□ -0.54
RTN1-203ENST00000395090 CCDC114Q96M63 670 aa11.68□□□□□ -0.54
RTN1-203ENST00000395090 BRD8Q9H0E9 1235 aa11.68□□□□□ -0.54
RTN1-203ENST00000395090 TASP1Q9H6P5 420 aa11.68□□□□□ -0.54
RTN1-203ENST00000395090 FAM114A2Q9NRY5 505 aa11.68□□□□□ -0.54
RTN1-203ENST00000395090 DONSONQ9NYP3 566 aa11.68□□□□□ -0.54
RTN1-203ENST00000395090 ZNF212Q9UDV6 495 aa11.68□□□□□ -0.54
RTN1-203ENST00000395090 AGO1Q9UL18 857 aaKnown RBP11.68□□□□□ -0.54
RTN1-203ENST00000395090 VANGL2Q9ULK5 521 aa11.68□□□□□ -0.54
RTN1-203ENST00000395090 DENND4CQ5VZ89 1909 aa11.68□□□□□ -0.54
RTN1-203ENST00000395090 NOTCH4Q99466 2003 aa11.68□□□□□ -0.54
RTN1-203ENST00000395090 GOLGA6L7A0A1B0GV03 622 aa11.68□□□□□ -0.54
RTN1-203ENST00000395090 A0A1W2PPC1 479 aa11.68□□□□□ -0.54
RTN1-203ENST00000395090 ESYT3A0FGR9 886 aa11.68□□□□□ -0.54
RTN1-203ENST00000395090 CFAP69A5D8W1 941 aa11.68□□□□□ -0.54
RTN1-203ENST00000395090 ZNF197O14709 1029 aa11.68□□□□□ -0.54
RTN1-203ENST00000395090 TP73O15350 636 aa11.68□□□□□ -0.54
RTN1-203ENST00000395090 MFSD11O43934 449 aa11.68□□□□□ -0.54
RTN1-203ENST00000395090 ZNF189O75820 626 aaPredicted RBP11.68□□□□□ -0.54
RTN1-203ENST00000395090 KRT14P02533 472 aa11.68□□□□□ -0.54
RTN1-203ENST00000395090 TACR2P21452 398 aa11.68□□□□□ -0.54
RTN1-203ENST00000395090 CORO1AP31146 461 aaKnown RBP11.68□□□□□ -0.54
RTN1-203ENST00000395090 SERPINB6P35237 376 aa11.68□□□□□ -0.54
RTN1-203ENST00000395090 ZNF33AQ06730 810 aa11.68□□□□□ -0.54
RTN1-203ENST00000395090 GALNT2Q10471 571 aa11.68□□□□□ -0.54
RTN1-203ENST00000395090 PDK1Q15118 436 aa11.68□□□□□ -0.54
RTN1-203ENST00000395090 SLC45A4Q5BKX6 768 aa11.68□□□□□ -0.54
RTN1-203ENST00000395090 PRRT3Q5FWE3 981 aa11.68□□□□□ -0.54
RTN1-203ENST00000395090 HP1BP3Q5SSJ5 553 aaPredicted RBP11.68□□□□□ -0.54
RTN1-203ENST00000395090 FBXO38Q6PIJ6 1188 aa11.68□□□□□ -0.54
RTN1-203ENST00000395090 GSTA5Q7RTV2 222 aa11.68□□□□□ -0.54
RTN1-203ENST00000395090 GRASPQ7Z6J2 395 aaPredicted RBP11.68□□□□□ -0.54
RTN1-203ENST00000395090 MTERF4Q7Z6M4 381 aaKnown RBP11.68□□□□□ -0.54
RTN1-203ENST00000395090 DENND1CQ8IV53 801 aa11.68□□□□□ -0.54
RTN1-203ENST00000395090 CMTM8Q8IZV2 173 aa11.68□□□□□ -0.54
RTN1-203ENST00000395090 UMODL1-AS1Q8N2C9 162 aa11.68□□□□□ -0.54
RTN1-203ENST00000395090 GLIS1Q8NBF1 620 aa11.68□□□□□ -0.54
RTN1-203ENST00000395090 TFB1MQ8WVM0 346 aaKnown RBP11.68□□□□□ -0.54
RTN1-203ENST00000395090 IGSF8Q969P0 613 aa11.68□□□□□ -0.54
RTN1-203ENST00000395090 PPP2R3CQ969Q6 453 aa11.68□□□□□ -0.54
RTN1-203ENST00000395090 GAL3ST3Q96A11 431 aa11.68□□□□□ -0.54
RTN1-203ENST00000395090 TCEAL4Q96EI5 215 aa11.68□□□□□ -0.54
RTN1-203ENST00000395090 QKIQ96PU8 341 aaKnown RBP eCLIP11.68□□□□□ -0.54
RTN1-203ENST00000395090 GCNAQ96QF7 691 aa11.68□□□□□ -0.54
RTN1-203ENST00000395090 ZYG11BQ9C0D3 744 aa11.68□□□□□ -0.54
RTN1-203ENST00000395090 C10orf88Q9H8K7 445 aa11.68□□□□□ -0.54
RTN1-203ENST00000395090 TRPC7Q9HCX4 862 aa11.68□□□□□ -0.54
RTN1-203ENST00000395090 TMEM248Q9NWD8 314 aa11.68□□□□□ -0.54
RTN1-203ENST00000395090 LMCD1Q9NZU5 365 aa11.68□□□□□ -0.54
RTN1-203ENST00000395090 ARHGAP26Q9UNA1 814 aa11.68□□□□□ -0.54
RTN1-203ENST00000395090 CPQQ9Y646 472 aa11.68□□□□□ -0.54
RTN1-203ENST00000395090 OBSL1O75147 1896 aa11.67□□□□□ -0.54
RTN1-203ENST00000395090 DOCK6Q96HP0 2047 aa11.67□□□□□ -0.54
RTN1-203ENST00000395090 FAM229AH3BQW9 127 aa11.67□□□□□ -0.54
RTN1-203ENST00000395090 H7C0C1 242 aa11.67□□□□□ -0.54
RTN1-203ENST00000395090 SGK1O00141 431 aa11.67□□□□□ -0.54
RTN1-203ENST00000395090 GFRA2O00451 464 aa11.67□□□□□ -0.54
RTN1-203ENST00000395090 CTSBP07858 339 aa11.67□□□□□ -0.54
RTN1-203ENST00000395090 MYBL2P10244 700 aa11.67□□□□□ -0.54
RTN1-203ENST00000395090 GJA1P17302 382 aa11.67□□□□□ -0.54
RTN1-203ENST00000395090 ITIH2P19823 946 aa11.67□□□□□ -0.54
RTN1-203ENST00000395090 ECHS1P30084 290 aa11.67□□□□□ -0.54
RTN1-203ENST00000395090 SLC6A4P31645 630 aa11.67□□□□□ -0.54
RTN1-203ENST00000395090 RPL21P46778 160 aaKnown RBP11.67□□□□□ -0.54
RTN1-203ENST00000395090 ATP5OP48047 213 aa11.67□□□□□ -0.54
RTN1-203ENST00000395090 PRKD1Q15139 912 aaPredicted RBP11.67□□□□□ -0.54
RTN1-203ENST00000395090 KCTD19Q17RG1 926 aaPredicted RBP11.67□□□□□ -0.54
RTN1-203ENST00000395090 SLC5A9Q2M3M2 681 aa11.67□□□□□ -0.54
RTN1-203ENST00000395090 STXBP5Q5T5C0 1151 aa11.67□□□□□ -0.54
RTN1-203ENST00000395090 GPR158Q5T848 1215 aa11.67□□□□□ -0.54
RTN1-203ENST00000395090 RAP1GAP2Q684P5 730 aa11.67□□□□□ -0.54
RTN1-203ENST00000395090 BNC2Q6ZN30 1099 aaPredicted RBP11.67□□□□□ -0.54
RTN1-203ENST00000395090 DDX42Q86XP3 938 aaKnown RBP eCLIP11.67□□□□□ -0.54
RTN1-203ENST00000395090 LRRC49Q8IUZ0 686 aa11.67□□□□□ -0.54
RTN1-203ENST00000395090 CDKL3Q8IVW4 592 aaPredicted RBP11.67□□□□□ -0.54
RTN1-203ENST00000395090 FAM217AQ8IXS0 508 aa11.67□□□□□ -0.54
RTN1-203ENST00000395090 FAM71DQ8N9W8 422 aa11.67□□□□□ -0.54
RTN1-203ENST00000395090 RSAD2Q8WXG1 361 aa11.67□□□□□ -0.54
RTN1-203ENST00000395090 IFT81Q8WYA0 676 aa11.67□□□□□ -0.54
RTN1-203ENST00000395090 TSGA13Q96PP4 275 aa11.67□□□□□ -0.54
RTN1-203ENST00000395090 FAM129AQ9BZQ8 928 aa11.67□□□□□ -0.54
RTN1-203ENST00000395090 NSUN3Q9H649 340 aaKnown RBP11.67□□□□□ -0.54
RTN1-203ENST00000395090 CCDC86Q9H6F5 360 aaKnown RBP11.67□□□□□ -0.54
RTN1-203ENST00000395090 SFXN1Q9H9B4 322 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms