RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 ENDOD1O94919 500 aa13.4□□□□□ -0.26
NFKB1-202ENST00000394820 ETV4P43268 484 aa13.4□□□□□ -0.26
NFKB1-202ENST00000394820 UBR7Q8N806 425 aa13.4□□□□□ -0.26
NFKB1-202ENST00000394820 APPL2Q8NEU8 664 aa13.4□□□□□ -0.26
NFKB1-202ENST00000394820 OR52K2Q8NGK3 314 aa13.4□□□□□ -0.26
NFKB1-202ENST00000394820 LPGAT1Q92604 370 aa13.4□□□□□ -0.26
NFKB1-202ENST00000394820 ESAMQ96AP7 390 aa13.4□□□□□ -0.26
NFKB1-202ENST00000394820 FBXL8Q96CD0 374 aa13.4□□□□□ -0.26
NFKB1-202ENST00000394820 SLC45A3Q96JT2 553 aa13.4□□□□□ -0.26
NFKB1-202ENST00000394820 ZFP42Q96MM3 310 aa13.4□□□□□ -0.26
NFKB1-202ENST00000394820 SPATA13Q96N96 652 aa13.4□□□□□ -0.26
NFKB1-202ENST00000394820 SPON2Q9BUD6 331 aa13.4□□□□□ -0.26
NFKB1-202ENST00000394820 LHX5Q9H2C1 402 aa13.4□□□□□ -0.26
NFKB1-202ENST00000394820 POLR1BQ9H9Y6 1135 aa13.4□□□□□ -0.26
NFKB1-202ENST00000394820 SPON1Q9HCB6 807 aa13.4□□□□□ -0.26
NFKB1-202ENST00000394820 DTLQ9NZJ0 730 aa13.4□□□□□ -0.26
NFKB1-202ENST00000394820 PSMD13Q9UNM6 376 aa13.4□□□□□ -0.26
NFKB1-202ENST00000394820 IGKV6-21A0A0C4DH24 114 aa13.4□□□□□ -0.26
NFKB1-202ENST00000394820 BOLA2-SMG1P6H3BVE0 249 aa13.4□□□□□ -0.26
NFKB1-202ENST00000394820 SCAMP3O14828 347 aaKnown RBP13.4□□□□□ -0.26
NFKB1-202ENST00000394820 HDAC3O15379 428 aa13.4□□□□□ -0.26
NFKB1-202ENST00000394820 CLOCKO15516 846 aa13.4□□□□□ -0.26
NFKB1-202ENST00000394820 USP17L7P0C7H9 530 aa13.4□□□□□ -0.26
NFKB1-202ENST00000394820 TMED10P49755 219 aaKnown RBP13.4□□□□□ -0.26
NFKB1-202ENST00000394820 SLC10A2Q12908 348 aaPredicted RBP13.4□□□□□ -0.26
NFKB1-202ENST00000394820 NT5DC4Q86YG4 428 aa13.4□□□□□ -0.26
NFKB1-202ENST00000394820 PDSS2Q86YH6 399 aa13.4□□□□□ -0.26
NFKB1-202ENST00000394820 GRIN3AQ8TCU5 1115 aa13.4□□□□□ -0.26
NFKB1-202ENST00000394820 SDCCAG3Q96C92 435 aa13.4□□□□□ -0.26
NFKB1-202ENST00000394820 ZNF778Q96MU6 729 aa13.4□□□□□ -0.26
NFKB1-202ENST00000394820 CDH19Q9H159 772 aa13.4□□□□□ -0.26
NFKB1-202ENST00000394820 GPAMQ9HCL2 828 aa13.4□□□□□ -0.26
NFKB1-202ENST00000394820 DNAAF2Q9NVR5 837 aaKnown RBP13.4□□□□□ -0.26
NFKB1-202ENST00000394820 TSC22D4Q9Y3Q8 395 aa13.4□□□□□ -0.26
NFKB1-202ENST00000394820 C2CD4BA6NLJ0 364 aa13.4□□□□□ -0.27
NFKB1-202ENST00000394820 TTC36A6NLP5 189 aa13.4□□□□□ -0.27
NFKB1-202ENST00000394820 STRNO43815 780 aa13.4□□□□□ -0.27
NFKB1-202ENST00000394820 ZNF189O75820 626 aaPredicted RBP13.4□□□□□ -0.27
NFKB1-202ENST00000394820 ERCC2P18074 760 aa13.4□□□□□ -0.27
NFKB1-202ENST00000394820 PGAM1P18669 254 aa13.4□□□□□ -0.27
NFKB1-202ENST00000394820 LRPAP1P30533 357 aa13.4□□□□□ -0.27
NFKB1-202ENST00000394820 SLC18A2Q05940 514 aa13.4□□□□□ -0.27
NFKB1-202ENST00000394820 KCNJ11Q14654 390 aa13.4□□□□□ -0.27
NFKB1-202ENST00000394820 ARL13BQ3SXY8 428 aa13.4□□□□□ -0.27
NFKB1-202ENST00000394820 CMASQ8NFW8 434 aaPredicted RBP13.4□□□□□ -0.27
NFKB1-202ENST00000394820 FTHL17Q9BXU8 183 aa13.4□□□□□ -0.27
NFKB1-202ENST00000394820 TBC1D23Q9NUY8 699 aa13.4□□□□□ -0.27
NFKB1-202ENST00000394820 MID2Q9UJV3 735 aa13.4□□□□□ -0.27
NFKB1-202ENST00000394820 ZNF229Q9UJW7 825 aa13.4□□□□□ -0.27
NFKB1-202ENST00000394820 MYRFQ9Y2G1 1151 aa13.4□□□□□ -0.27
NFKB1-202ENST00000394820 TTC24A2A3L6 582 aaPredicted RBP13.39□□□□□ -0.27
NFKB1-202ENST00000394820 ZBTB24O43167 697 aaPredicted RBP13.39□□□□□ -0.27
NFKB1-202ENST00000394820 CA8P35219 290 aa13.39□□□□□ -0.27
NFKB1-202ENST00000394820 TKTL1P51854 596 aa13.39□□□□□ -0.27
NFKB1-202ENST00000394820 SLC5A3P53794 718 aa13.39□□□□□ -0.27
NFKB1-202ENST00000394820 SEMA5AQ13591 1074 aa13.39□□□□□ -0.27
NFKB1-202ENST00000394820 BNIPLQ7Z465 357 aa13.39□□□□□ -0.27
NFKB1-202ENST00000394820 PIGZQ86VD9 579 aa13.39□□□□□ -0.27
NFKB1-202ENST00000394820 SPPL2CQ8IUH8 684 aa13.39□□□□□ -0.27
NFKB1-202ENST00000394820 BLOC1S5Q8TDH9 187 aa13.39□□□□□ -0.27
NFKB1-202ENST00000394820 ELMO1Q92556 727 aa13.39□□□□□ -0.27
NFKB1-202ENST00000394820 SIGLEC10Q96LC7 697 aa13.39□□□□□ -0.27
NFKB1-202ENST00000394820 KCTD15Q96SI1 283 aaPredicted RBP13.39□□□□□ -0.27
NFKB1-202ENST00000394820 ALG9Q9H6U8 611 aa13.39□□□□□ -0.27
NFKB1-202ENST00000394820 CYP3A43Q9HB55 503 aa13.39□□□□□ -0.27
NFKB1-202ENST00000394820 TLL2Q9Y6L7 1015 aa13.39□□□□□ -0.27
NFKB1-202ENST00000394820 DGKBQ9Y6T7 804 aa13.39□□□□□ -0.27
NFKB1-202ENST00000394820 HEATR9A2RTY3 570 aa13.39□□□□□ -0.27
NFKB1-202ENST00000394820 SYCE1LA8MT33 242 aa13.39□□□□□ -0.27
NFKB1-202ENST00000394820 DDHD2O94830 711 aa13.39□□□□□ -0.27
NFKB1-202ENST00000394820 BCAT1P54687 386 aa13.39□□□□□ -0.27
NFKB1-202ENST00000394820 CYP51A1Q16850 503 aa13.39□□□□□ -0.27
NFKB1-202ENST00000394820 NOMO2Q5JPE7 1267 aa13.39□□□□□ -0.27
NFKB1-202ENST00000394820 DRICH1Q6PGQ1 229 aaPredicted RBP13.39□□□□□ -0.27
NFKB1-202ENST00000394820 HERC6Q8IVU3 1022 aa13.39□□□□□ -0.27
NFKB1-202ENST00000394820 ZFP28Q8NHY6 868 aa13.39□□□□□ -0.27
NFKB1-202ENST00000394820 RIN3Q8TB24 985 aa13.39□□□□□ -0.27
NFKB1-202ENST00000394820 CCDC106Q9BWC9 280 aa13.39□□□□□ -0.27
NFKB1-202ENST00000394820 BCO2Q9BYV7 579 aa13.39□□□□□ -0.27
NFKB1-202ENST00000394820 ITGA11Q9UKX5 1188 aa13.39□□□□□ -0.27
NFKB1-202ENST00000394820 ZNFX1Q9P2E3 1918 aaKnown RBP13.39□□□□□ -0.27
NFKB1-202ENST00000394820 TCRBV5S1A1TA0A578 114 aa13.38□□□□□ -0.27
NFKB1-202ENST00000394820 TRAFD1O14545 582 aaPredicted RBP13.38□□□□□ -0.27
NFKB1-202ENST00000394820 TOR1BO14657 336 aa13.38□□□□□ -0.27
NFKB1-202ENST00000394820 KDM1AO60341 852 aa13.38□□□□□ -0.27
NFKB1-202ENST00000394820 NCK1P16333 377 aa13.38□□□□□ -0.27
NFKB1-202ENST00000394820 PTPN1P18031 435 aaKnown RBP13.38□□□□□ -0.27
NFKB1-202ENST00000394820 PROZP22891 400 aa13.38□□□□□ -0.27
NFKB1-202ENST00000394820 NMBRP28336 390 aa13.38□□□□□ -0.27
NFKB1-202ENST00000394820 ADSLP30566 484 aaPredicted RBP13.38□□□□□ -0.27
NFKB1-202ENST00000394820 DGCR6Q14129 220 aa13.38□□□□□ -0.27
NFKB1-202ENST00000394820 SOWAHAQ2M3V2 549 aa13.38□□□□□ -0.27
NFKB1-202ENST00000394820 TAPT1Q6NXT6 567 aa13.38□□□□□ -0.27
NFKB1-202ENST00000394820 HEATR4Q86WZ0 1026 aa13.38□□□□□ -0.27
NFKB1-202ENST00000394820 ZNF513Q8N8E2 541 aaPredicted RBP13.38□□□□□ -0.27
NFKB1-202ENST00000394820 RNF145Q96MT1 663 aa13.38□□□□□ -0.27
NFKB1-202ENST00000394820 WDCPQ9H6R7 721 aa13.38□□□□□ -0.27
NFKB1-202ENST00000394820 USP29Q9HBJ7 922 aa13.38□□□□□ -0.27
NFKB1-202ENST00000394820 CROCCQ5TZA2 2017 aa13.38□□□□□ -0.27
NFKB1-202ENST00000394820 KLHL33A6NCF5 533 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms