RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 ST13P50502 369 aaKnown RBP5.77□□□□□ -1.49
RFFL-202ENST00000394597 ZNF135P52742 658 aaPredicted RBP5.77□□□□□ -1.49
RFFL-202ENST00000394597 IST1P53990 364 aa5.77□□□□□ -1.49
RFFL-202ENST00000394597 EPHB3P54753 998 aa5.77□□□□□ -1.49
RFFL-202ENST00000394597 TPTEP56180 551 aa5.77□□□□□ -1.49
RFFL-202ENST00000394597 STX1BP61266 288 aa5.77□□□□□ -1.49
RFFL-202ENST00000394597 TRIM25Q14258 630 aaKnown RBP5.77□□□□□ -1.49
RFFL-202ENST00000394597 PTK2BQ14289 1009 aa5.77□□□□□ -1.49
RFFL-202ENST00000394597 CARTPTQ16568 116 aa5.77□□□□□ -1.49
RFFL-202ENST00000394597 ARHGAP17Q68EM7 881 aa5.77□□□□□ -1.49
RFFL-202ENST00000394597 SMYD5Q6GMV2 418 aa5.77□□□□□ -1.49
RFFL-202ENST00000394597 C15orf39Q6ZRI6 1047 aa5.77□□□□□ -1.49
RFFL-202ENST00000394597 FAM35AQ86V20 835 aa5.77□□□□□ -1.49
RFFL-202ENST00000394597 TRABD2AQ86V40 505 aa5.77□□□□□ -1.49
RFFL-202ENST00000394597 ALYREFQ86V81 257 aaKnown RBP5.77□□□□□ -1.49
RFFL-202ENST00000394597 PLD3Q8IV08 490 aa5.77□□□□□ -1.49
RFFL-202ENST00000394597 IQCF2Q8IXL9 164 aa5.77□□□□□ -1.49
RFFL-202ENST00000394597 ADAM32Q8TC27 787 aa5.77□□□□□ -1.49
RFFL-202ENST00000394597 PWWP2AQ96N64 755 aa5.77□□□□□ -1.49
RFFL-202ENST00000394597 BTBD9Q96Q07 612 aa5.77□□□□□ -1.49
RFFL-202ENST00000394597 CDK5RAP1Q96SZ6 601 aaKnown RBP5.77□□□□□ -1.49
RFFL-202ENST00000394597 BCO2Q9BYV7 579 aa5.77□□□□□ -1.49
RFFL-202ENST00000394597 VPS11Q9H270 941 aa5.77□□□□□ -1.49
RFFL-202ENST00000394597 PTPRHQ9HD43 1115 aa5.77□□□□□ -1.49
RFFL-202ENST00000394597 PACSIN3Q9UKS6 424 aa5.77□□□□□ -1.49
RFFL-202ENST00000394597 NR2E1Q9Y466 385 aa5.77□□□□□ -1.49
RFFL-202ENST00000394597 A0A0U1RQF3 1178 aa5.77□□□□□ -1.49
RFFL-202ENST00000394597 C16orf96A6NNT2 1141 aa5.77□□□□□ -1.49
RFFL-202ENST00000394597 CRCPO75575 148 aa5.77□□□□□ -1.49
RFFL-202ENST00000394597 CYBBP04839 570 aa5.77□□□□□ -1.49
RFFL-202ENST00000394597 CYBAP13498 195 aa5.77□□□□□ -1.49
RFFL-202ENST00000394597 TTKP33981 857 aa5.77□□□□□ -1.49
RFFL-202ENST00000394597 BCAP31P51572 246 aa5.77□□□□□ -1.49
RFFL-202ENST00000394597 TBX4P57082 545 aa5.77□□□□□ -1.49
RFFL-202ENST00000394597 CLDN10P78369 228 aa5.77□□□□□ -1.49
RFFL-202ENST00000394597 RELAQ04206 551 aa5.77□□□□□ -1.49
RFFL-202ENST00000394597 SULT2A1Q06520 285 aa5.77□□□□□ -1.49
RFFL-202ENST00000394597 PTP4A2Q12974 167 aa5.77□□□□□ -1.49
RFFL-202ENST00000394597 MOGSQ13724 837 aa5.77□□□□□ -1.49
RFFL-202ENST00000394597 PTK6Q13882 451 aa5.77□□□□□ -1.49
RFFL-202ENST00000394597 SOWAHAQ2M3V2 549 aa5.77□□□□□ -1.49
RFFL-202ENST00000394597 TJAP1Q5JTD0 557 aa5.77□□□□□ -1.49
RFFL-202ENST00000394597 PMF1Q6P1K2 205 aa5.77□□□□□ -1.49
RFFL-202ENST00000394597 ANKS3Q6ZW76 656 aa5.77□□□□□ -1.49
RFFL-202ENST00000394597 TMC7Q7Z402 723 aa5.77□□□□□ -1.49
RFFL-202ENST00000394597 CCDC33Q8N5R6 958 aa5.77□□□□□ -1.49
RFFL-202ENST00000394597 PXYLP1Q8TE99 480 aa5.77□□□□□ -1.49
RFFL-202ENST00000394597 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.77□□□□□ -1.49
RFFL-202ENST00000394597 PABPC5Q96DU9 382 aaKnown RBP5.77□□□□□ -1.49
RFFL-202ENST00000394597 HHIPL1Q96JK4 782 aa5.77□□□□□ -1.49
RFFL-202ENST00000394597 SERPINB11Q96P15 392 aa5.77□□□□□ -1.49
RFFL-202ENST00000394597 RPRD1AQ96P16 312 aaPredicted RBP5.77□□□□□ -1.49
RFFL-202ENST00000394597 HNRNPABQ99729 332 aaKnown RBP5.77□□□□□ -1.49
RFFL-202ENST00000394597 TRIM15Q9C019 465 aa5.77□□□□□ -1.49
RFFL-202ENST00000394597 HAPLN2Q9GZV7 340 aa5.77□□□□□ -1.49
RFFL-202ENST00000394597 SIX4Q9UIU6 781 aa5.77□□□□□ -1.49
RFFL-202ENST00000394597 PPM1HQ9ULR3 514 aa5.77□□□□□ -1.49
RFFL-202ENST00000394597 PHIPQ8WWQ0 1821 aa5.77□□□□□ -1.49
RFFL-202ENST00000394597 QSER1Q2KHR3 1735 aa5.77□□□□□ -1.49
RFFL-202ENST00000394597 SH3PXD2BA1X283 911 aa5.76□□□□□ -1.49
RFFL-202ENST00000394597 C2orf71A6NGG8 1288 aa5.76□□□□□ -1.49
RFFL-202ENST00000394597 OR6C75A6NL08 312 aa5.76□□□□□ -1.49
RFFL-202ENST00000394597 STAU1O95793 577 aaKnown RBP5.76□□□□□ -1.49
RFFL-202ENST00000394597 SNRPAP09012 282 aaKnown RBP5.76□□□□□ -1.49
RFFL-202ENST00000394597 IDO1P14902 403 aa5.76□□□□□ -1.49
RFFL-202ENST00000394597 PROZP22891 400 aa5.76□□□□□ -1.49
RFFL-202ENST00000394597 LMO2P25791 158 aa5.76□□□□□ -1.49
RFFL-202ENST00000394597 KRT6CP48668 564 aa5.76□□□□□ -1.49
RFFL-202ENST00000394597 EFTUD2Q15029 972 aaKnown RBP eCLIP5.76□□□□□ -1.49
RFFL-202ENST00000394597 METTL21CQ5VZV1 264 aa5.76□□□□□ -1.49
RFFL-202ENST00000394597 RNF219Q5W0B1 726 aaPredicted RBP5.76□□□□□ -1.49
RFFL-202ENST00000394597 IL31Q6EBC2 164 aa5.76□□□□□ -1.49
RFFL-202ENST00000394597 ZFP1Q6P2D0 407 aa5.76□□□□□ -1.49
RFFL-202ENST00000394597 SLC7A5P1Q8MH63 180 aa5.76□□□□□ -1.49
RFFL-202ENST00000394597 PQLC1Q8N2U9 271 aa5.76□□□□□ -1.49
RFFL-202ENST00000394597 DBF4BQ8NFT6 615 aa5.76□□□□□ -1.49
RFFL-202ENST00000394597 TNIP2Q8NFZ5 429 aa5.76□□□□□ -1.49
RFFL-202ENST00000394597 ZNF558Q96NG5 402 aa5.76□□□□□ -1.49
RFFL-202ENST00000394597 RNF157Q96PX1 679 aa5.76□□□□□ -1.49
RFFL-202ENST00000394597 CITED4Q96RK1 184 aa5.76□□□□□ -1.49
RFFL-202ENST00000394597 ACBD6Q9BR61 282 aa5.76□□□□□ -1.49
RFFL-202ENST00000394597 OXCT2Q9BYC2 517 aaPredicted RBP5.76□□□□□ -1.49
RFFL-202ENST00000394597 B3GNT5Q9BYG0 378 aa5.76□□□□□ -1.49
RFFL-202ENST00000394597 KCNK4Q9NYG8 393 aa5.76□□□□□ -1.49
RFFL-202ENST00000394597 EFR3BQ9Y2G0 817 aa5.76□□□□□ -1.49
RFFL-202ENST00000394597 SPEF1Q9Y4P9 236 aa5.76□□□□□ -1.49
RFFL-202ENST00000394597 BNIP3LO60238 219 aa5.76□□□□□ -1.49
RFFL-202ENST00000394597 CLASP2O75122 1294 aaKnown RBP5.76□□□□□ -1.49
RFFL-202ENST00000394597 GSNP06396 782 aa5.76□□□□□ -1.49
RFFL-202ENST00000394597 IRF1P10914 325 aa5.76□□□□□ -1.49
RFFL-202ENST00000394597 IFNA8P32881 189 aa5.76□□□□□ -1.49
RFFL-202ENST00000394597 CYP2C18P33260 490 aa5.76□□□□□ -1.49
RFFL-202ENST00000394597 SERPINB5P36952 375 aa5.76□□□□□ -1.49
RFFL-202ENST00000394597 GPD2P43304 727 aa5.76□□□□□ -1.49
RFFL-202ENST00000394597 RECQLP46063 649 aaPredicted RBP5.76□□□□□ -1.49
RFFL-202ENST00000394597 KPNA2P52292 529 aaKnown RBP5.76□□□□□ -1.49
RFFL-202ENST00000394597 ACTR3P61158 418 aa5.76□□□□□ -1.49
RFFL-202ENST00000394597 SLC1A5Q15758 541 aa5.76□□□□□ -1.49
RFFL-202ENST00000394597 USP41Q3LFD5 358 aa5.76□□□□□ -1.49
RFFL-202ENST00000394597 C6orf52Q5T4I8 152 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms