RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 KREMEN2Q8NCW0 462 aa15.18■□□□□ 0.02
CCT4-201ENST00000394440 TCP10LQ8TDR4 215 aa15.18■□□□□ 0.02
CCT4-201ENST00000394440 NSMCE1Q8WV22 266 aa15.18■□□□□ 0.02
CCT4-201ENST00000394440 IL1RAPL1Q9NZN1 696 aa15.18■□□□□ 0.02
CCT4-201ENST00000394440 GBF1Q92538 1859 aa15.18■□□□□ 0.02
CCT4-201ENST00000394440 TLL1O43897 1013 aa15.18■□□□□ 0.02
CCT4-201ENST00000394440 LRG1P02750 347 aa15.18■□□□□ 0.02
CCT4-201ENST00000394440 ERVK-10P10266 1014 aa15.18■□□□□ 0.02
CCT4-201ENST00000394440 PYGBP11216 843 aa15.18■□□□□ 0.02
CCT4-201ENST00000394440 FOXN2P32314 431 aa15.18■□□□□ 0.02
CCT4-201ENST00000394440 DSC2Q02487 901 aa15.18■□□□□ 0.02
CCT4-201ENST00000394440 PCID2Q5JVF3 399 aa15.18■□□□□ 0.02
CCT4-201ENST00000394440 RGS9BPQ6ZS82 235 aa15.18■□□□□ 0.02
CCT4-201ENST00000394440 FAM217AQ8IXS0 508 aa15.18■□□□□ 0.02
CCT4-201ENST00000394440 C7orf61Q8IZ16 206 aa15.18■□□□□ 0.02
CCT4-201ENST00000394440 OR7D4Q8NG98 312 aa15.18■□□□□ 0.02
CCT4-201ENST00000394440 ZNF778Q96MU6 729 aa15.18■□□□□ 0.02
CCT4-201ENST00000394440 DDX50Q9BQ39 737 aaKnown RBP15.18■□□□□ 0.02
CCT4-201ENST00000394440 FSD1LQ9BXM9 530 aa15.18■□□□□ 0.02
CCT4-201ENST00000394440 TRPC7Q9HCX4 862 aa15.18■□□□□ 0.02
CCT4-201ENST00000394440 ALG13Q9NP73 1137 aaKnown RBP15.18■□□□□ 0.02
CCT4-201ENST00000394440 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.17■□□□□ 0.02
CCT4-201ENST00000394440 ILVBLA1L0T0 632 aa15.17■□□□□ 0.02
CCT4-201ENST00000394440 C2orf71A6NGG8 1288 aa15.17■□□□□ 0.02
CCT4-201ENST00000394440 HIDE1A8MVS5 230 aa15.17■□□□□ 0.02
CCT4-201ENST00000394440 DNAJB1P25685 340 aa15.17■□□□□ 0.02
CCT4-201ENST00000394440 NMBRP28336 390 aa15.17■□□□□ 0.02
CCT4-201ENST00000394440 CTNNB1P35222 781 aa15.17■□□□□ 0.02
CCT4-201ENST00000394440 ETV4P43268 484 aa15.17■□□□□ 0.02
CCT4-201ENST00000394440 CYP4F8P98187 520 aa15.17■□□□□ 0.02
CCT4-201ENST00000394440 DNAJC3Q13217 504 aa15.17■□□□□ 0.02
CCT4-201ENST00000394440 ARMC3Q5W041 872 aa15.17■□□□□ 0.02
CCT4-201ENST00000394440 CXorf57Q6NSI4 855 aaKnown RBP15.17■□□□□ 0.02
CCT4-201ENST00000394440 POTEHQ6S545 545 aa15.17■□□□□ 0.02
CCT4-201ENST00000394440 CPLX4Q7Z7G2 160 aa15.17■□□□□ 0.02
CCT4-201ENST00000394440 TAX1BP1Q86VP1 789 aa15.17■□□□□ 0.02
CCT4-201ENST00000394440 RASSF3Q86WH2 238 aa15.17■□□□□ 0.02
CCT4-201ENST00000394440 HS6ST3Q8IZP7 471 aa15.17■□□□□ 0.02
CCT4-201ENST00000394440 CNPY4Q8N129 248 aa15.17■□□□□ 0.02
CCT4-201ENST00000394440 PTCD2Q8WV60 388 aaKnown RBP15.17■□□□□ 0.02
CCT4-201ENST00000394440 MRM3Q9HC36 420 aaKnown RBP15.17■□□□□ 0.02
CCT4-201ENST00000394440 ZFATQ9P243 1243 aa15.17■□□□□ 0.02
CCT4-201ENST00000394440 CPQQ9Y646 472 aa15.17■□□□□ 0.02
CCT4-201ENST00000394440 TCP11X1B4DZS4 312 aa15.17■□□□□ 0.02
CCT4-201ENST00000394440 NRG2O14511 850 aaPredicted RBP15.17■□□□□ 0.02
CCT4-201ENST00000394440 MUSKO15146 869 aa15.17■□□□□ 0.02
CCT4-201ENST00000394440 DHRS4L1P0CG22 281 aa15.17■□□□□ 0.02
CCT4-201ENST00000394440 HDCP19113 662 aa15.17■□□□□ 0.02
CCT4-201ENST00000394440 TAC1P20366 129 aa15.17■□□□□ 0.02
CCT4-201ENST00000394440 CD86P42081 329 aa15.17■□□□□ 0.02
CCT4-201ENST00000394440 MSLNQ13421 630 aaPredicted RBP15.17■□□□□ 0.02
CCT4-201ENST00000394440 PKN3Q6P5Z2 889 aa15.17■□□□□ 0.02
CCT4-201ENST00000394440 LVRNQ6Q4G3 990 aa15.17■□□□□ 0.02
CCT4-201ENST00000394440 PIGWQ7Z7B1 504 aa15.17■□□□□ 0.02
CCT4-201ENST00000394440 MRPL43Q8N983 215 aaKnown RBP15.17■□□□□ 0.02
CCT4-201ENST00000394440 SPPL3Q8TCT6 385 aa15.17■□□□□ 0.02
CCT4-201ENST00000394440 TGS1Q96RS0 853 aaKnown RBP15.17■□□□□ 0.02
CCT4-201ENST00000394440 CPNE1Q99829 537 aa15.17■□□□□ 0.02
CCT4-201ENST00000394440 EMILIN2Q9BXX0 1053 aa15.17■□□□□ 0.02
CCT4-201ENST00000394440 ACE2Q9BYF1 805 aaPredicted RBP15.17■□□□□ 0.02
CCT4-201ENST00000394440 SLC17A7Q9P2U7 560 aa15.17■□□□□ 0.02
CCT4-201ENST00000394440 PRKAG3Q9UGI9 489 aa15.17■□□□□ 0.02
CCT4-201ENST00000394440 NOTCH4Q99466 2003 aa15.17■□□□□ 0.02
CCT4-201ENST00000394440 ANKRD36A6QL64 1941 aa15.16■□□□□ 0.02
CCT4-201ENST00000394440 EBAG9O00559 213 aa15.16■□□□□ 0.02
CCT4-201ENST00000394440 LPXNO60711 386 aa15.16■□□□□ 0.02
CCT4-201ENST00000394440 ADRA1DP25100 572 aa15.16■□□□□ 0.02
CCT4-201ENST00000394440 GP5P40197 560 aa15.16■□□□□ 0.02
CCT4-201ENST00000394440 CHRNA4P43681 627 aa15.16■□□□□ 0.02
CCT4-201ENST00000394440 SLC7A9P82251 487 aa15.16■□□□□ 0.02
CCT4-201ENST00000394440 PDK4Q16654 411 aa15.16■□□□□ 0.02
CCT4-201ENST00000394440 TEDDM1Q5T9Z0 273 aa15.16■□□□□ 0.02
CCT4-201ENST00000394440 MROH9Q5TGP6 573 aa15.16■□□□□ 0.02
CCT4-201ENST00000394440 MRPS31Q92665 395 aaKnown RBP15.16■□□□□ 0.02
CCT4-201ENST00000394440 MCMBPQ9BTE3 642 aa15.16■□□□□ 0.02
CCT4-201ENST00000394440 POLR1EQ9GZS1 481 aaKnown RBP15.16■□□□□ 0.02
CCT4-201ENST00000394440 TCAF1Q9Y4C2 921 aa15.16■□□□□ 0.02
CCT4-201ENST00000394440 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.16■□□□□ 0.02
CCT4-201ENST00000394440 LINC01553A4QN01 128 aa15.16■□□□□ 0.02
CCT4-201ENST00000394440 KDELR3O43731 214 aa15.16■□□□□ 0.02
CCT4-201ENST00000394440 GLUD1P00367 558 aa15.16■□□□□ 0.02
CCT4-201ENST00000394440 RHOCP08134 193 aa15.16■□□□□ 0.02
CCT4-201ENST00000394440 VIMP08670 466 aaKnown RBP15.16■□□□□ 0.02
CCT4-201ENST00000394440 ZNF177Q13360 481 aaPredicted RBP15.16■□□□□ 0.02
CCT4-201ENST00000394440 CDHR3Q6ZTQ4 885 aa15.16■□□□□ 0.02
CCT4-201ENST00000394440 KCNMB4Q86W47 210 aa15.16■□□□□ 0.02
CCT4-201ENST00000394440 POF1BQ8WVV4 589 aa15.16■□□□□ 0.02
CCT4-201ENST00000394440 HTATIP2Q9BUP3 242 aa15.16■□□□□ 0.02
CCT4-201ENST00000394440 C12orf65Q9H3J6 166 aaKnown RBP15.16■□□□□ 0.02
CCT4-201ENST00000394440 ATXN3LQ9H3M9 355 aa15.16■□□□□ 0.02
CCT4-201ENST00000394440 GGA2Q9UJY4 613 aa15.16■□□□□ 0.02
CCT4-201ENST00000394440 TSPAN3O60637 253 aa15.15■□□□□ 0.02
CCT4-201ENST00000394440 ALDOAP04075 364 aaKnown RBP15.15■□□□□ 0.02
CCT4-201ENST00000394440 ALADP13716 330 aa15.15■□□□□ 0.02
CCT4-201ENST00000394440 ETFBP38117 255 aa15.15■□□□□ 0.02
CCT4-201ENST00000394440 CLCN4P51793 760 aa15.15■□□□□ 0.02
CCT4-201ENST00000394440 POU6F1Q14863 301 aa15.15■□□□□ 0.02
CCT4-201ENST00000394440 PCSK7Q16549 785 aa15.15■□□□□ 0.02
CCT4-201ENST00000394440 PLPP4Q5VZY2 271 aa15.15■□□□□ 0.02
CCT4-201ENST00000394440 ISL2Q96A47 359 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms