RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 DPY19L3Q6ZPD9 716 aa15.7■□□□□ 0.1
CHMP3-202ENST00000393773 C11orf57Q6ZUT1 292 aaPredicted RBP15.7■□□□□ 0.1
CHMP3-202ENST00000393773 SETD3Q86TU7 594 aaPredicted RBP15.7■□□□□ 0.1
CHMP3-202ENST00000393773 PARGQ86W56 976 aa15.7■□□□□ 0.1
CHMP3-202ENST00000393773 ZNF397Q8NF99 534 aaPredicted RBP15.7■□□□□ 0.1
CHMP3-202ENST00000393773 SHC3Q92529 594 aa15.7■□□□□ 0.1
CHMP3-202ENST00000393773 PPP1R16AQ96I34 528 aa15.7■□□□□ 0.1
CHMP3-202ENST00000393773 NPY6RQ99463 290 aa15.7■□□□□ 0.1
CHMP3-202ENST00000393773 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.7■□□□□ 0.1
CHMP3-202ENST00000393773 DPH1Q9BZG8 443 aa15.7■□□□□ 0.1
CHMP3-202ENST00000393773 SIK2Q9H0K1 926 aa15.7■□□□□ 0.1
CHMP3-202ENST00000393773 ZNF212Q9UDV6 495 aa15.7■□□□□ 0.1
CHMP3-202ENST00000393773 KLF15Q9UIH9 416 aa15.7■□□□□ 0.1
CHMP3-202ENST00000393773 IGLV3-10A0A075B6K4 115 aa15.69■□□□□ 0.1
CHMP3-202ENST00000393773 PMS2P1A4D2B8 440 aa15.69■□□□□ 0.1
CHMP3-202ENST00000393773 ADRB3P13945 408 aa15.69■□□□□ 0.1
CHMP3-202ENST00000393773 NOS2P35228 1153 aa15.69■□□□□ 0.1
CHMP3-202ENST00000393773 CXCR3P49682 368 aa15.69■□□□□ 0.1
CHMP3-202ENST00000393773 VAC14Q08AM6 782 aa15.69■□□□□ 0.1
CHMP3-202ENST00000393773 MORC3Q14149 939 aa15.69■□□□□ 0.1
CHMP3-202ENST00000393773 LY6DQ14210 128 aa15.69■□□□□ 0.1
CHMP3-202ENST00000393773 CDKN3Q16667 212 aa15.69■□□□□ 0.1
CHMP3-202ENST00000393773 ARSIQ5FYB1 569 aa15.69■□□□□ 0.1
CHMP3-202ENST00000393773 BRMS1LQ5PSV4 323 aa15.69■□□□□ 0.1
CHMP3-202ENST00000393773 PARS2Q7L3T8 475 aaKnown RBP15.69■□□□□ 0.1
CHMP3-202ENST00000393773 TFAP2DQ7Z6R9 452 aa15.69■□□□□ 0.1
CHMP3-202ENST00000393773 DCP2Q8IU60 420 aaKnown RBP15.69■□□□□ 0.1
CHMP3-202ENST00000393773 ATXN7L3BQ96GX2 97 aa15.69■□□□□ 0.1
CHMP3-202ENST00000393773 PRR11Q96HE9 360 aaPredicted RBP15.69■□□□□ 0.1
CHMP3-202ENST00000393773 KLF6Q99612 283 aaPredicted RBP15.69■□□□□ 0.1
CHMP3-202ENST00000393773 SLC17A9Q9BYT1 436 aa15.69■□□□□ 0.1
CHMP3-202ENST00000393773 TKTL2Q9H0I9 626 aa15.69■□□□□ 0.1
CHMP3-202ENST00000393773 ABCG4Q9H172 646 aa15.69■□□□□ 0.1
CHMP3-202ENST00000393773 OSBPL2Q9H1P3 480 aa15.69■□□□□ 0.1
CHMP3-202ENST00000393773 EVA1BQ9NVM1 165 aa15.69■□□□□ 0.1
CHMP3-202ENST00000393773 HOOK1Q9UJC3 728 aaKnown RBP15.69■□□□□ 0.1
CHMP3-202ENST00000393773 AJAP1Q9UKB5 411 aaPredicted RBP15.69■□□□□ 0.1
CHMP3-202ENST00000393773 ENTPD2Q9Y5L3 495 aa15.69■□□□□ 0.1
CHMP3-202ENST00000393773 FADS3Q9Y5Q0 445 aa15.69■□□□□ 0.1
CHMP3-202ENST00000393773 HS3ST3A1Q9Y663 406 aa15.69■□□□□ 0.1
CHMP3-202ENST00000393773 CSNK1G3Q9Y6M4 447 aa15.69■□□□□ 0.1
CHMP3-202ENST00000393773 CYSRT1A8MQ03 144 aa15.68■□□□□ 0.1
CHMP3-202ENST00000393773 CDRT15L2A8MXV6 281 aa15.68■□□□□ 0.1
CHMP3-202ENST00000393773 H3BM21 787 aa15.68■□□□□ 0.1
CHMP3-202ENST00000393773 SPINT1O43278 529 aa15.68■□□□□ 0.1
CHMP3-202ENST00000393773 AP1G1O43747 822 aa15.68■□□□□ 0.1
CHMP3-202ENST00000393773 ZMPSTE24O75844 475 aa15.68■□□□□ 0.1
CHMP3-202ENST00000393773 USP8P40818 1118 aa15.68■□□□□ 0.1
CHMP3-202ENST00000393773 SERPINH1P50454 418 aaKnown RBP15.68■□□□□ 0.1
CHMP3-202ENST00000393773 PDX1P52945 283 aa15.68■□□□□ 0.1
CHMP3-202ENST00000393773 STX17P56962 302 aa15.68■□□□□ 0.1
CHMP3-202ENST00000393773 RPS21P63220 83 aaKnown RBP15.68■□□□□ 0.1
CHMP3-202ENST00000393773 SLC6A3Q01959 620 aa15.68■□□□□ 0.1
CHMP3-202ENST00000393773 C1QBPQ07021 282 aaKnown RBP15.68■□□□□ 0.1
CHMP3-202ENST00000393773 PAK1Q13153 545 aa15.68■□□□□ 0.1
CHMP3-202ENST00000393773 DRAP1Q14919 205 aaPredicted RBP15.68■□□□□ 0.1
CHMP3-202ENST00000393773 EFL1Q7Z2Z2 1120 aaKnown RBP15.68■□□□□ 0.1
CHMP3-202ENST00000393773 ELOA2Q8IYF1 753 aaPredicted RBP15.68■□□□□ 0.1
CHMP3-202ENST00000393773 OR7D4Q8NG98 312 aa15.68■□□□□ 0.1
CHMP3-202ENST00000393773 NT5C3BQ969T7 300 aa15.68■□□□□ 0.1
CHMP3-202ENST00000393773 PGAP3Q96FM1 320 aaPredicted RBP15.68■□□□□ 0.1
CHMP3-202ENST00000393773 CRACR2AQ9BSW2 395 aa15.68■□□□□ 0.1
CHMP3-202ENST00000393773 TMPRSS4Q9NRS4 437 aa15.68■□□□□ 0.1
CHMP3-202ENST00000393773 RRN3Q9NYV6 651 aa15.68■□□□□ 0.1
CHMP3-202ENST00000393773 MPP6Q9NZW5 540 aa15.68■□□□□ 0.1
CHMP3-202ENST00000393773 APEX2Q9UBZ4 518 aa15.68■□□□□ 0.1
CHMP3-202ENST00000393773 PCDHGA8Q9Y5G5 932 aa15.68■□□□□ 0.1
CHMP3-202ENST00000393773 TLN1Q9Y490 2541 aaKnown RBP15.67■□□□□ 0.1
CHMP3-202ENST00000393773 SPTA1P02549 2419 aa15.67■□□□□ 0.1
CHMP3-202ENST00000393773 EME2A4GXA9 379 aaPredicted RBP15.67■□□□□ 0.1
CHMP3-202ENST00000393773 DRGXA6NNA5 263 aa15.67■□□□□ 0.1
CHMP3-202ENST00000393773 CASC3O15234 703 aaKnown RBP15.67■□□□□ 0.1
CHMP3-202ENST00000393773 AQP9O43315 295 aa15.67■□□□□ 0.1
CHMP3-202ENST00000393773 C6P13671 934 aa15.67■□□□□ 0.1
CHMP3-202ENST00000393773 SLC9A1P19634 815 aa15.67■□□□□ 0.1
CHMP3-202ENST00000393773 L1CAMP32004 1257 aa15.67■□□□□ 0.1
CHMP3-202ENST00000393773 RABIFP47224 123 aa15.67■□□□□ 0.1
CHMP3-202ENST00000393773 CCNHP51946 323 aaPredicted RBP15.67■□□□□ 0.1
CHMP3-202ENST00000393773 ARF5P84085 180 aa15.67■□□□□ 0.1
CHMP3-202ENST00000393773 MAPK8IP2Q13387 824 aaPredicted RBP15.67■□□□□ 0.1
CHMP3-202ENST00000393773 PDE1CQ14123 709 aaPredicted RBP15.67■□□□□ 0.1
CHMP3-202ENST00000393773 ARHGAP44Q17R89 818 aa15.67■□□□□ 0.1
CHMP3-202ENST00000393773 DEFB133Q30KQ1 61 aa15.67■□□□□ 0.1
CHMP3-202ENST00000393773 PERM1Q5SV97 790 aa15.67■□□□□ 0.1
CHMP3-202ENST00000393773 PCDH20Q8N6Y1 951 aaKnown RBP15.67■□□□□ 0.1
CHMP3-202ENST00000393773 VOPP1Q96AW1 172 aa15.67■□□□□ 0.1
CHMP3-202ENST00000393773 FAM81BQ96LP2 452 aa15.67■□□□□ 0.1
CHMP3-202ENST00000393773 SLC46A1Q96NT5 459 aa15.67■□□□□ 0.1
CHMP3-202ENST00000393773 BOCQ9BWV1 1114 aa15.67■□□□□ 0.1
CHMP3-202ENST00000393773 SRRTQ9BXP5 876 aaKnown RBP15.67■□□□□ 0.1
CHMP3-202ENST00000393773 CEP44Q9C0F1 390 aa15.67■□□□□ 0.1
CHMP3-202ENST00000393773 NCKIPSDQ9NZQ3 722 aa15.67■□□□□ 0.1
CHMP3-202ENST00000393773 PNMA8BQ9ULN7 279 aaPredicted RBP15.67■□□□□ 0.1
CHMP3-202ENST00000393773 AHCTF1Q8WYP5 2266 aa15.66■□□□□ 0.1
CHMP3-202ENST00000393773 GOLGA6L4A6NEF3 574 aa15.66■□□□□ 0.1
CHMP3-202ENST00000393773 B8ZZF3 427 aa15.66■□□□□ 0.1
CHMP3-202ENST00000393773 K7ENP7 123 aa15.66■□□□□ 0.1
CHMP3-202ENST00000393773 RIOK3O14730 519 aaKnown RBP15.66■□□□□ 0.1
CHMP3-202ENST00000393773 ENDOD1O94919 500 aa15.66■□□□□ 0.1
CHMP3-202ENST00000393773 PAK4O96013 591 aaPredicted RBP15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms