RNA–Protein interactions for RNA: ENST00000393310.5

LIMS1-203, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-203ENST00000393310 STK11Q15831 433 aa8.24□□□□□ -1.09
LIMS1-203ENST00000393310 KYNUQ16719 465 aa8.24□□□□□ -1.09
LIMS1-203ENST00000393310 EFHC1Q5JVL4 640 aa8.24□□□□□ -1.09
LIMS1-203ENST00000393310 ADCK1Q86TW2 530 aa8.24□□□□□ -1.09
LIMS1-203ENST00000393310 NDNQ99608 321 aa8.24□□□□□ -1.09
LIMS1-203ENST00000393310 ZCCHC2Q9C0B9 1178 aaKnown RBP8.24□□□□□ -1.09
LIMS1-203ENST00000393310 TMPRSS4Q9NRS4 437 aa8.24□□□□□ -1.09
LIMS1-203ENST00000393310 FBXL12Q9NXK8 326 aa8.24□□□□□ -1.09
LIMS1-203ENST00000393310 DLL3Q9NYJ7 618 aa8.24□□□□□ -1.09
LIMS1-203ENST00000393310 TBX20Q9UMR3 447 aa8.24□□□□□ -1.09
LIMS1-203ENST00000393310 PLCL2Q9UPR0 1127 aa8.24□□□□□ -1.09
LIMS1-203ENST00000393310 I3L4J1 428 aa8.23□□□□□ -1.09
LIMS1-203ENST00000393310 TRDMT1O14717 391 aaKnown RBP8.23□□□□□ -1.09
LIMS1-203ENST00000393310 SIN3BO75182 1162 aa8.23□□□□□ -1.09
LIMS1-203ENST00000393310 THEGLP0DJG4 465 aa8.23□□□□□ -1.09
LIMS1-203ENST00000393310 PIM1P11309 404 aaPredicted RBP8.23□□□□□ -1.09
LIMS1-203ENST00000393310 ITKQ08881 620 aa8.23□□□□□ -1.09
LIMS1-203ENST00000393310 NFYCQ13952 458 aa8.23□□□□□ -1.09
LIMS1-203ENST00000393310 C21orf62-AS1Q17RA5 79 aa8.23□□□□□ -1.09
LIMS1-203ENST00000393310 PLK5Q496M5 336 aa8.23□□□□□ -1.09
LIMS1-203ENST00000393310 ARSHQ5FYA8 562 aa8.23□□□□□ -1.09
LIMS1-203ENST00000393310 WSCD1Q658N2 575 aa8.23□□□□□ -1.09
LIMS1-203ENST00000393310 POTEGQ6S5H5 508 aa8.23□□□□□ -1.09
LIMS1-203ENST00000393310 C14orf80Q86SX3 495 aa8.23□□□□□ -1.09
LIMS1-203ENST00000393310 WDR49Q8IV35 697 aa8.23□□□□□ -1.09
LIMS1-203ENST00000393310 IFT20Q8IY31 132 aa8.23□□□□□ -1.09
LIMS1-203ENST00000393310 ZNF579Q8NAF0 562 aaKnown RBP8.23□□□□□ -1.09
LIMS1-203ENST00000393310 METTL6Q8TCB7 284 aa8.23□□□□□ -1.09
LIMS1-203ENST00000393310 LMX1AQ8TE12 382 aa8.23□□□□□ -1.09
LIMS1-203ENST00000393310 GPR62Q9BZJ7 368 aa8.23□□□□□ -1.09
LIMS1-203ENST00000393310 PDE11AQ9HCR9 933 aa8.23□□□□□ -1.09
LIMS1-203ENST00000393310 DNAJC28Q9NX36 388 aa8.23□□□□□ -1.09
LIMS1-203ENST00000393310 IL1RAPL1Q9NZN1 696 aa8.23□□□□□ -1.09
LIMS1-203ENST00000393310 EFCAB7A8K855 629 aa8.23□□□□□ -1.09
LIMS1-203ENST00000393310 K7ELQ4 463 aaPredicted RBP8.23□□□□□ -1.09
LIMS1-203ENST00000393310 MEN1O00255 615 aa8.23□□□□□ -1.09
LIMS1-203ENST00000393310 BIRC5O15392 142 aa8.23□□□□□ -1.09
LIMS1-203ENST00000393310 ATP1A1P05023 1023 aaKnown RBP8.23□□□□□ -1.09
LIMS1-203ENST00000393310 CXCL8P10145 99 aa8.23□□□□□ -1.09
LIMS1-203ENST00000393310 COPAP53621 1224 aa8.23□□□□□ -1.09
LIMS1-203ENST00000393310 SKP1P63208 163 aa8.23□□□□□ -1.09
LIMS1-203ENST00000393310 DCTN2Q13561 401 aaKnown RBP8.23□□□□□ -1.09
LIMS1-203ENST00000393310 LYPLAL1Q5VWZ2 237 aa8.23□□□□□ -1.09
LIMS1-203ENST00000393310 SCARA5Q6ZMJ2 495 aa8.23□□□□□ -1.09
LIMS1-203ENST00000393310 KDM7AQ6ZMT4 941 aa8.23□□□□□ -1.09
LIMS1-203ENST00000393310 CDH24Q86UP0 819 aa8.23□□□□□ -1.09
LIMS1-203ENST00000393310 ZC3H18Q86VM9 953 aaKnown RBP8.23□□□□□ -1.09
LIMS1-203ENST00000393310 ITFG1Q8TB96 612 aa8.23□□□□□ -1.09
LIMS1-203ENST00000393310 EPS8L3Q8TE67 593 aaKnown RBP8.23□□□□□ -1.09
LIMS1-203ENST00000393310 CHTF18Q8WVB6 975 aa8.23□□□□□ -1.09
LIMS1-203ENST00000393310 RPRD1AQ96P16 312 aaPredicted RBP8.23□□□□□ -1.09
LIMS1-203ENST00000393310 HNRNPABQ99729 332 aaKnown RBP8.23□□□□□ -1.09
LIMS1-203ENST00000393310 UBXN6Q9BZV1 441 aa8.23□□□□□ -1.09
LIMS1-203ENST00000393310 DNMT3BQ9UBC3 853 aaKnown RBP8.23□□□□□ -1.09
LIMS1-203ENST00000393310 A0A0B4J203 849 aa8.23□□□□□ -1.09
LIMS1-203ENST00000393310 EME2A4GXA9 379 aaPredicted RBP8.23□□□□□ -1.09
LIMS1-203ENST00000393310 RALBP11234 206 aa8.23□□□□□ -1.09
LIMS1-203ENST00000393310 NPY2RP49146 381 aa8.23□□□□□ -1.09
LIMS1-203ENST00000393310 RENBPP51606 427 aa8.23□□□□□ -1.09
LIMS1-203ENST00000393310 RRADP55042 308 aa8.23□□□□□ -1.09
LIMS1-203ENST00000393310 SNRPD1P62314 119 aaKnown RBP8.23□□□□□ -1.09
LIMS1-203ENST00000393310 RPS15P62841 145 aaKnown RBP8.23□□□□□ -1.09
LIMS1-203ENST00000393310 RACK1P63244 317 aaKnown RBP8.23□□□□□ -1.09
LIMS1-203ENST00000393310 TCF15Q12870 199 aa8.23□□□□□ -1.09
LIMS1-203ENST00000393310 FIP1L1Q6UN15 594 aaKnown RBP8.23□□□□□ -1.09
LIMS1-203ENST00000393310 GJA10Q969M2 543 aa8.23□□□□□ -1.09
LIMS1-203ENST00000393310 IGSF8Q969P0 613 aa8.23□□□□□ -1.09
LIMS1-203ENST00000393310 SNF8Q96H20 258 aa8.23□□□□□ -1.09
LIMS1-203ENST00000393310 NLRC4Q9NPP4 1024 aa8.23□□□□□ -1.09
LIMS1-203ENST00000393310 RPRD1BQ9NQG5 326 aaKnown RBP8.23□□□□□ -1.09
LIMS1-203ENST00000393310 PKD2L2Q9NZM6 624 aa8.23□□□□□ -1.09
LIMS1-203ENST00000393310 ZMIZ1Q9ULJ6 1067 aa8.23□□□□□ -1.09
LIMS1-203ENST00000393310 PADI2Q9Y2J8 665 aa8.23□□□□□ -1.09
LIMS1-203ENST00000393310 MYO15AQ9UKN7 3530 aa8.23□□□□□ -1.09
LIMS1-203ENST00000393310 CFAP99D6REC4 459 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 GPR37O15354 613 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 GPR32O75388 356 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 AGXTP21549 392 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 SERPINB6P35237 376 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 ADCY8P40145 1251 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 GRIN1Q05586 938 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 ZNF284Q2VY69 593 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 OR6B2Q6IFH4 312 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 ENOSF1Q7L5Y1 443 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 PATL1Q86TB9 770 aaKnown RBP8.22□□□□□ -1.09
LIMS1-203ENST00000393310 ACO2Q99798 780 aaKnown RBP8.22□□□□□ -1.09
LIMS1-203ENST00000393310 SH2D3AQ9BRG2 576 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 MRPL1Q9BYD6 325 aaKnown RBP8.22□□□□□ -1.09
LIMS1-203ENST00000393310 FBRSL1Q9HCM7 1045 aaKnown RBP8.22□□□□□ -1.09
LIMS1-203ENST00000393310 ABCC13Q9NSE7 274 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 GGA2Q9UJY4 613 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 MTMR11A4FU01 709 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 BTBD18B2RXH4 712 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 E7ENQ6 273 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 ARHGAP6O43182 974 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 IDH3BO43837 385 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 SSX5O60225 188 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 HLA-DRAP01903 254 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 ATF4P18848 351 aaPredicted RBP8.22□□□□□ -1.09
LIMS1-203ENST00000393310 CD82P27701 267 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms