RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 C12orf76Q8N812 135 aaPredicted RBP-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 ZNF611Q8N823 705 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 ZNF615Q8N8J6 731 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 KIAA1958Q8N8K9 716 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 C2orf69Q8N8R5 385 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 SYT14Q8NB59 555 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 ZBTB34Q8NCN2 500 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 PRSS33Q8NF86 280 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 GPR156Q8NFN8 814 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 OR14C36Q8NHC7 312 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 LINC01006Q8NI28 216 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 SUN3Q8TAQ9 357 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 TMEM163Q8TC26 289 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 RNF138Q8WVD3 245 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 ZFPM2Q8WW38 1151 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 STON2Q8WXE9 905 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 SRSF12Q8WXF0 261 aaKnown RBP-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 CELF1Q92879 486 aaKnown RBP-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 USP7Q93009 1102 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 TRIM63Q969Q1 353 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 TADA1Q96BN2 335 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 ERLEC1Q96DZ1 483 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 EDC3Q96F86 508 aaKnown RBP-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 SCRN2Q96FV2 425 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 P2RY11Q96G91 374 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 TMEM19Q96HH6 336 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 ZNF419Q96HQ0 510 aaPredicted RBP-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 ST6GAL2Q96JF0 529 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 TEKT5Q96M29 485 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 TRAPPC9Q96Q05 1148 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 STACQ99469 402 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 WDR77Q9BQA1 342 aaPredicted RBP-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 VKORC1Q9BQB6 163 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 LZTS2Q9BRK4 669 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 PTDSS2Q9BVG9 487 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 TTLL2Q9BWV7 592 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 POLDIP3Q9BY77 421 aaKnown RBP-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 RNF26Q9BY78 433 aaPredicted RBP-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 FAM126AQ9BYI3 521 aaPredicted RBP-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 B3GNT4Q9C0J1 378 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 LAT2Q9GZY6 243 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 SIK2Q9H0K1 926 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 EPN3Q9H201 632 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 KLHL31Q9H511 634 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 LDAHQ9H6V9 325 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 FKRPQ9H9S5 495 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 UPF2Q9HAU5 1272 aaKnown RBP-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 LRRC4Q9HBW1 653 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 RNF146Q9NTX7 359 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 ZCCHC3Q9NUD5 404 aaKnown RBP-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 EXD2Q9NVH0 621 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 MAP3K20Q9NYL2 800 aaKnown RBP-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 NUDT4Q9NZJ9 180 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 LRFN1Q9P244 771 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 EPS15L1Q9UBC2 864 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 DKK4Q9UBT3 224 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 DUX4Q9UBX2 424 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 LRWD1Q9UFC0 647 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 AFF4Q9UHB7 1163 aaKnown RBP-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 EVLQ9UI08 416 aaPredicted RBP-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 ZNF230Q9UIE0 474 aaPredicted RBP-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 ZDHHC8Q9ULC8 765 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 PPT2Q9UMR5 302 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 PHTF1Q9UMS5 762 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 RPH3ALQ9UNE2 315 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 LAMP3Q9UQV4 416 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 SSX2IPQ9Y2D8 614 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 PCDHA8Q9Y5H6 950 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 WIF1Q9Y5W5 379 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 ZFP37Q9Y6Q3 630 aaPredicted RBP-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 SLC4A4Q9Y6R1 1079 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 CAPN7Q9Y6W3 813 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 TRIP12Q14669 1992 aaPredicted RBP-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 CUL9Q8IWT3 2517 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 CACNA1GO43497 2377 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 ASXL2Q76L83 1435 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 NAV3Q8IVL0 2385 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 FLNAP21333 2647 aaKnown RBP-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 DISP3Q9P2K9 1392 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 EMSYQ7Z589 1322 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 STK36Q9NRP7 1315 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 SHANK1Q9Y566 2161 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 IGLV2-18A0A075B6J9 118 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 A0A087WWV3 80 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 A0A0G2JPF8 293 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 TMEM150BA6NC51 233 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 PRSS29PA6NIE9 313 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 ASB14A6NK59 587 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 SH2D7A6NKC9 451 aaPredicted RBP-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 A6NL46 340 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 HNRNPCL3B7ZW38 293 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 RASA4BC9J798 803 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 ZNF587BE7ETH6 402 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 F2RL2O00254 374 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 ELL2O00472 640 aaPredicted RBP-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 DVL2O14641 736 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 TGFB1I1O43294 461 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 LDB2O43679 373 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 IDH3BO43837 385 aa-0.3□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms