RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 GPR174Q9BXC1 333 aa19.73■□□□□ 0.75
GTF3A-201ENST00000381140 LZTFL1Q9NQ48 299 aa19.73■□□□□ 0.75
GTF3A-201ENST00000381140 IPO11Q9UI26 975 aaKnown RBP19.73■□□□□ 0.75
GTF3A-201ENST00000381140 SARDHQ9UL12 918 aa19.73■□□□□ 0.75
GTF3A-201ENST00000381140 C1QTNF3-AMACRE9PGA6 284 aa19.72■□□□□ 0.75
GTF3A-201ENST00000381140 KPNA3O00505 521 aaPredicted RBP19.72■□□□□ 0.75
GTF3A-201ENST00000381140 ALOX15BO15296 676 aa19.72■□□□□ 0.75
GTF3A-201ENST00000381140 PSTPIP1O43586 416 aa19.72■□□□□ 0.75
GTF3A-201ENST00000381140 ZNF821O75541 412 aaPredicted RBP19.72■□□□□ 0.75
GTF3A-201ENST00000381140 MAP3K6O95382 1288 aa19.72■□□□□ 0.75
GTF3A-201ENST00000381140 OXTRP30559 389 aa19.72■□□□□ 0.75
GTF3A-201ENST00000381140 PI4KAP42356 2102 aa19.72■□□□□ 0.75
GTF3A-201ENST00000381140 MARCKSL1P49006 195 aa19.72■□□□□ 0.75
GTF3A-201ENST00000381140 CCNHP51946 323 aaPredicted RBP19.72■□□□□ 0.75
GTF3A-201ENST00000381140 LLGL1Q15334 1064 aa19.72■□□□□ 0.75
GTF3A-201ENST00000381140 IFI16Q16666 785 aaKnown RBP19.72■□□□□ 0.75
GTF3A-201ENST00000381140 ARSIQ5FYB1 569 aa19.72■□□□□ 0.75
GTF3A-201ENST00000381140 PMS2CLQ68D20 193 aa19.72■□□□□ 0.75
GTF3A-201ENST00000381140 NCBP2-AS2Q69YL0 99 aa19.72■□□□□ 0.75
GTF3A-201ENST00000381140 RFX6Q8HWS3 928 aa19.72■□□□□ 0.75
GTF3A-201ENST00000381140 DCLK2Q8N568 766 aa19.72■□□□□ 0.75
GTF3A-201ENST00000381140 ATPAF2Q8N5M1 289 aa19.72■□□□□ 0.75
GTF3A-201ENST00000381140 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.72■□□□□ 0.75
GTF3A-201ENST00000381140 EXOC2Q96KP1 924 aa19.72■□□□□ 0.75
GTF3A-201ENST00000381140 C16orf45Q96MC5 204 aaPredicted RBP19.72■□□□□ 0.75
GTF3A-201ENST00000381140 MAK16Q9BXY0 300 aaKnown RBP19.72■□□□□ 0.75
GTF3A-201ENST00000381140 ZDHHC6Q9H6R6 413 aa19.72■□□□□ 0.75
GTF3A-201ENST00000381140 PDFQ9HBH1 243 aa19.72■□□□□ 0.75
GTF3A-201ENST00000381140 SERGEFQ9UGK8 458 aa19.72■□□□□ 0.75
GTF3A-201ENST00000381140 IL36AQ9UHA7 158 aa19.72■□□□□ 0.75
GTF3A-201ENST00000381140 OTOGLQ3ZCN5 2332 aa19.71■□□□□ 0.75
GTF3A-201ENST00000381140 GRID2IPA4D2P6 1211 aa19.71■□□□□ 0.75
GTF3A-201ENST00000381140 FAM47DPA6NHR8 397 aa19.71■□□□□ 0.75
GTF3A-201ENST00000381140 KRIT1O00522 736 aa19.71■□□□□ 0.75
GTF3A-201ENST00000381140 CTSLP07711 333 aa19.71■□□□□ 0.75
GTF3A-201ENST00000381140 C5AR1P21730 350 aa19.71■□□□□ 0.75
GTF3A-201ENST00000381140 SNRPD1P62314 119 aaKnown RBP19.71■□□□□ 0.75
GTF3A-201ENST00000381140 CREB5Q02930 508 aa19.71■□□□□ 0.75
GTF3A-201ENST00000381140 FAM46CQ5VWP2 391 aa19.71■□□□□ 0.75
GTF3A-201ENST00000381140 CCDC50Q8IVM0 306 aa19.71■□□□□ 0.75
GTF3A-201ENST00000381140 AADATQ8N5Z0 425 aa19.71■□□□□ 0.75
GTF3A-201ENST00000381140 PQLC3Q8N755 202 aa19.71■□□□□ 0.75
GTF3A-201ENST00000381140 CASKIN2Q8WXE0 1202 aa19.71■□□□□ 0.75
GTF3A-201ENST00000381140 KRT35Q92764 455 aa19.71■□□□□ 0.75
GTF3A-201ENST00000381140 ISG20Q96AZ6 181 aaKnown RBP19.71■□□□□ 0.75
GTF3A-201ENST00000381140 FAF2Q96CS3 445 aa19.71■□□□□ 0.75
GTF3A-201ENST00000381140 CALR3Q96L12 384 aaKnown RBP19.71■□□□□ 0.75
GTF3A-201ENST00000381140 RNF157Q96PX1 679 aa19.71■□□□□ 0.75
GTF3A-201ENST00000381140 WSB2Q9NYS7 404 aaPredicted RBP19.71■□□□□ 0.75
GTF3A-201ENST00000381140 PPM1HQ9ULR3 514 aa19.71■□□□□ 0.75
GTF3A-201ENST00000381140 SCML1Q9UN30 329 aa19.71■□□□□ 0.75
GTF3A-201ENST00000381140 DOCK9Q9BZ29 2069 aa19.71■□□□□ 0.75
GTF3A-201ENST00000381140 FAM186AA6NE01 2351 aa19.71■□□□□ 0.75
GTF3A-201ENST00000381140 CXorf51AA0A1B0GTR3 108 aa19.7■□□□□ 0.74
GTF3A-201ENST00000381140 C3orf70A6NLC5 250 aaPredicted RBP19.7■□□□□ 0.74
GTF3A-201ENST00000381140 PALMO75781 387 aa19.7■□□□□ 0.74
GTF3A-201ENST00000381140 PRNPP04156 253 aa19.7■□□□□ 0.74
GTF3A-201ENST00000381140 GKP32189 559 aa19.7■□□□□ 0.74
GTF3A-201ENST00000381140 ACSL1P33121 698 aa19.7■□□□□ 0.74
GTF3A-201ENST00000381140 PTGER3P43115 390 aa19.7■□□□□ 0.74
GTF3A-201ENST00000381140 DYNLT1P63172 113 aa19.7■□□□□ 0.74
GTF3A-201ENST00000381140 IL10RBQ08334 325 aa19.7■□□□□ 0.74
GTF3A-201ENST00000381140 SFSWAPQ12872 951 aaKnown RBP19.7■□□□□ 0.74
GTF3A-201ENST00000381140 CYTH1Q15438 398 aa19.7■□□□□ 0.74
GTF3A-201ENST00000381140 CCDC6Q16204 474 aa19.7■□□□□ 0.74
GTF3A-201ENST00000381140 INO80DQ53TQ3 878 aaPredicted RBP19.7■□□□□ 0.74
GTF3A-201ENST00000381140 RIF1Q5UIP0 2472 aaKnown RBP19.7■□□□□ 0.74
GTF3A-201ENST00000381140 MFSD7Q6UXD7 560 aa19.7■□□□□ 0.74
GTF3A-201ENST00000381140 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.7■□□□□ 0.74
GTF3A-201ENST00000381140 OR2AP1Q8NGE2 309 aa19.7■□□□□ 0.74
GTF3A-201ENST00000381140 RUBCNQ92622 972 aa19.7■□□□□ 0.74
GTF3A-201ENST00000381140 HSPA12BQ96MM6 686 aa19.7■□□□□ 0.74
GTF3A-201ENST00000381140 GDAP1L1Q96MZ0 367 aa19.7■□□□□ 0.74
GTF3A-201ENST00000381140 HEPHQ9BQS7 1158 aa19.7■□□□□ 0.74
GTF3A-201ENST00000381140 BTBD1Q9H0C5 482 aa19.7■□□□□ 0.74
GTF3A-201ENST00000381140 NEUROG2Q9H2A3 272 aa19.7■□□□□ 0.74
GTF3A-201ENST00000381140 ARRDC1-AS1Q9H2J1 176 aa19.7■□□□□ 0.74
GTF3A-201ENST00000381140 LHX3Q9UBR4 397 aa19.7■□□□□ 0.74
GTF3A-201ENST00000381140 GUCA1BQ9UMX6 200 aa19.7■□□□□ 0.74
GTF3A-201ENST00000381140 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.7■□□□□ 0.74
GTF3A-201ENST00000381140 RNF103O00237 685 aa19.7■□□□□ 0.74
GTF3A-201ENST00000381140 KIF5CO60282 957 aa19.7■□□□□ 0.74
GTF3A-201ENST00000381140 LEFTY1O75610 366 aa19.7■□□□□ 0.74
GTF3A-201ENST00000381140 IGSF6O95976 241 aa19.7■□□□□ 0.74
GTF3A-201ENST00000381140 GSRP00390 522 aa19.7■□□□□ 0.74
GTF3A-201ENST00000381140 IGLV3-19P01714 112 aa19.7■□□□□ 0.74
GTF3A-201ENST00000381140 ETF1P62495 437 aaKnown RBP19.7■□□□□ 0.74
GTF3A-201ENST00000381140 GBE1Q04446 702 aa19.7■□□□□ 0.74
GTF3A-201ENST00000381140 PAFAH1B3Q15102 231 aaKnown RBP19.7■□□□□ 0.74
GTF3A-201ENST00000381140 KAZNQ674X7 775 aa19.7■□□□□ 0.74
GTF3A-201ENST00000381140 USP30Q70CQ3 517 aa19.7■□□□□ 0.74
GTF3A-201ENST00000381140 CYP2U1Q7Z449 544 aa19.7■□□□□ 0.74
GTF3A-201ENST00000381140 RNF10Q8N5U6 811 aaKnown RBP19.7■□□□□ 0.74
GTF3A-201ENST00000381140 CINPQ9BW66 212 aaPredicted RBP19.7■□□□□ 0.74
GTF3A-201ENST00000381140 DYRK4Q9NR20 520 aa19.7■□□□□ 0.74
GTF3A-201ENST00000381140 EVLQ9UI08 416 aaPredicted RBP19.7■□□□□ 0.74
GTF3A-201ENST00000381140 HEY1Q9Y5J3 304 aa19.7■□□□□ 0.74
GTF3A-201ENST00000381140 WASF2Q9Y6W5 498 aa19.7■□□□□ 0.74
GTF3A-201ENST00000381140 ATXN2Q99700 1313 aaKnown RBP19.69■□□□□ 0.74
GTF3A-201ENST00000381140 EP300Q09472 2414 aaPredicted RBP19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms