RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 MTIF3Q9H2K0 278 aaKnown RBP17.62■□□□□ 0.41
THUMPD2-201ENST00000378727 NKIRAS1Q9NYS0 192 aa17.62■□□□□ 0.41
THUMPD2-201ENST00000378727 FAM169AQ9Y6X4 670 aa17.62■□□□□ 0.41
THUMPD2-201ENST00000378727 ILVBLA1L0T0 632 aa17.62■□□□□ 0.41
THUMPD2-201ENST00000378727 MAGEB16A2A368 324 aa17.62■□□□□ 0.41
THUMPD2-201ENST00000378727 GJB3O75712 270 aa17.62■□□□□ 0.41
THUMPD2-201ENST00000378727 FAM107AO95990 144 aa17.62■□□□□ 0.41
THUMPD2-201ENST00000378727 MT-ND3P03897 115 aa17.62■□□□□ 0.41
THUMPD2-201ENST00000378727 CKMP06732 381 aa17.62■□□□□ 0.41
THUMPD2-201ENST00000378727 CHRNA4P43681 627 aa17.62■□□□□ 0.41
THUMPD2-201ENST00000378727 SLC7A9P82251 487 aa17.62■□□□□ 0.41
THUMPD2-201ENST00000378727 UBE3AQ05086 875 aa17.62■□□□□ 0.41
THUMPD2-201ENST00000378727 FRG1Q14331 258 aaKnown RBP17.62■□□□□ 0.41
THUMPD2-201ENST00000378727 PCSK7Q16549 785 aa17.62■□□□□ 0.41
THUMPD2-201ENST00000378727 PPM1LQ5SGD2 360 aa17.62■□□□□ 0.41
THUMPD2-201ENST00000378727 IL31Q6EBC2 164 aa17.62■□□□□ 0.41
THUMPD2-201ENST00000378727 SETD3Q86TU7 594 aaPredicted RBP17.62■□□□□ 0.41
THUMPD2-201ENST00000378727 BANPQ8N9N5 519 aa17.62■□□□□ 0.41
THUMPD2-201ENST00000378727 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.62■□□□□ 0.41
THUMPD2-201ENST00000378727 GDAP1Q8TB36 358 aa17.62■□□□□ 0.41
THUMPD2-201ENST00000378727 MICAL1Q8TDZ2 1067 aa17.62■□□□□ 0.41
THUMPD2-201ENST00000378727 ZNF778Q96MU6 729 aa17.62■□□□□ 0.41
THUMPD2-201ENST00000378727 LBHD1Q9BQE6 289 aaPredicted RBP17.62■□□□□ 0.41
THUMPD2-201ENST00000378727 KIFC1Q9BW19 673 aa17.62■□□□□ 0.41
THUMPD2-201ENST00000378727 FSD1LQ9BXM9 530 aa17.62■□□□□ 0.41
THUMPD2-201ENST00000378727 ATP13A1Q9HD20 1204 aa17.62■□□□□ 0.41
THUMPD2-201ENST00000378727 ASAH2Q9NR71 780 aa17.62■□□□□ 0.41
THUMPD2-201ENST00000378727 PSAT1Q9Y617 370 aa17.62■□□□□ 0.41
THUMPD2-201ENST00000378727 GBF1Q92538 1859 aa17.62■□□□□ 0.41
THUMPD2-201ENST00000378727 KDELR3O43731 214 aa17.61■□□□□ 0.41
THUMPD2-201ENST00000378727 RFPL2O75678 378 aa17.61■□□□□ 0.41
THUMPD2-201ENST00000378727 KRT37O76014 449 aa17.61■□□□□ 0.41
THUMPD2-201ENST00000378727 RHOCP08134 193 aa17.61■□□□□ 0.41
THUMPD2-201ENST00000378727 SNRPAP09012 282 aaKnown RBP17.61■□□□□ 0.41
THUMPD2-201ENST00000378727 CA4P22748 312 aa17.61■□□□□ 0.41
THUMPD2-201ENST00000378727 NMBRP28336 390 aa17.61■□□□□ 0.41
THUMPD2-201ENST00000378727 CDC25CP30307 473 aa17.61■□□□□ 0.41
THUMPD2-201ENST00000378727 MGAT5Q09328 741 aa17.61■□□□□ 0.41
THUMPD2-201ENST00000378727 BMPR2Q13873 1038 aa17.61■□□□□ 0.41
THUMPD2-201ENST00000378727 C9orf50Q5SZB4 431 aa17.61■□□□□ 0.41
THUMPD2-201ENST00000378727 ZNF449Q6P9G9 518 aa17.61■□□□□ 0.41
THUMPD2-201ENST00000378727 FAM217AQ8IXS0 508 aa17.61■□□□□ 0.41
THUMPD2-201ENST00000378727 SGSM3Q96HU1 749 aa17.61■□□□□ 0.41
THUMPD2-201ENST00000378727 ZNF599Q96NL3 588 aa17.61■□□□□ 0.41
THUMPD2-201ENST00000378727 SPON2Q9BUD6 331 aa17.61■□□□□ 0.41
THUMPD2-201ENST00000378727 SLC46A2Q9BY10 475 aa17.61■□□□□ 0.41
THUMPD2-201ENST00000378727 VPS45Q9NRW7 570 aa17.61■□□□□ 0.41
THUMPD2-201ENST00000378727 CHD9Q3L8U1 2897 aa17.61■□□□□ 0.41
THUMPD2-201ENST00000378727 NDUFAB1O14561 156 aa17.6■□□□□ 0.41
THUMPD2-201ENST00000378727 TBL1XO60907 577 aa17.6■□□□□ 0.41
THUMPD2-201ENST00000378727 SLC18A2Q05940 514 aa17.6■□□□□ 0.41
THUMPD2-201ENST00000378727 SLC1A5Q15758 541 aa17.6■□□□□ 0.41
THUMPD2-201ENST00000378727 RASSF3Q86WH2 238 aa17.6■□□□□ 0.41
THUMPD2-201ENST00000378727 CDKL2Q92772 493 aa17.6■□□□□ 0.41
THUMPD2-201ENST00000378727 CHMP6Q96FZ7 201 aa17.6■□□□□ 0.41
THUMPD2-201ENST00000378727 ACE2Q9BYF1 805 aaPredicted RBP17.6■□□□□ 0.41
THUMPD2-201ENST00000378727 FAM107BQ9H098 131 aa17.6■□□□□ 0.41
THUMPD2-201ENST00000378727 MAN1C1Q9NR34 630 aa17.6■□□□□ 0.41
THUMPD2-201ENST00000378727 TRAV19A0A0A6YYK7 116 aa17.6■□□□□ 0.41
THUMPD2-201ENST00000378727 ASMTLO95671 621 aa17.6■□□□□ 0.41
THUMPD2-201ENST00000378727 OXCT1P55809 520 aa17.6■□□□□ 0.41
THUMPD2-201ENST00000378727 NAB1Q13506 487 aa17.6■□□□□ 0.41
THUMPD2-201ENST00000378727 POU6F1Q14863 301 aa17.6■□□□□ 0.41
THUMPD2-201ENST00000378727 FSCBQ5H9T9 825 aa17.6■□□□□ 0.41
THUMPD2-201ENST00000378727 PCID2Q5JVF3 399 aa17.6■□□□□ 0.41
THUMPD2-201ENST00000378727 LGSNQ5TDP6 509 aa17.6■□□□□ 0.41
THUMPD2-201ENST00000378727 RNF219Q5W0B1 726 aaPredicted RBP17.6■□□□□ 0.41
THUMPD2-201ENST00000378727 PACS1Q6VY07 963 aa17.6■□□□□ 0.41
THUMPD2-201ENST00000378727 CCDC117Q8IWD4 279 aaPredicted RBP17.6■□□□□ 0.41
THUMPD2-201ENST00000378727 TTC16Q8NEE8 873 aa17.6■□□□□ 0.41
THUMPD2-201ENST00000378727 ZNF473Q8WTR7 871 aaKnown RBP17.6■□□□□ 0.41
THUMPD2-201ENST00000378727 DYDC1Q8WWB3 177 aa17.6■□□□□ 0.41
THUMPD2-201ENST00000378727 CKAP2Q8WWK9 683 aa17.6■□□□□ 0.41
THUMPD2-201ENST00000378727 SEMA3CQ99985 751 aa17.6■□□□□ 0.41
THUMPD2-201ENST00000378727 ARNT2Q9HBZ2 717 aa17.6■□□□□ 0.41
THUMPD2-201ENST00000378727 CFAP97Q9P2B7 532 aa17.6■□□□□ 0.41
THUMPD2-201ENST00000378727 HELZP42694 1942 aaKnown RBP17.6■□□□□ 0.41
THUMPD2-201ENST00000378727 NOTCH4Q99466 2003 aa17.6■□□□□ 0.41
THUMPD2-201ENST00000378727 CCDC78A2IDD5 438 aa17.59■□□□□ 0.41
THUMPD2-201ENST00000378727 RFPL1O75677 317 aa17.59■□□□□ 0.41
THUMPD2-201ENST00000378727 KRT38O76015 456 aa17.59■□□□□ 0.41
THUMPD2-201ENST00000378727 C1RP00736 705 aa17.59■□□□□ 0.41
THUMPD2-201ENST00000378727 PYGBP11216 843 aa17.59■□□□□ 0.41
THUMPD2-201ENST00000378727 EPCAMP16422 314 aa17.59■□□□□ 0.41
THUMPD2-201ENST00000378727 DRD4P21917 467 aa17.59■□□□□ 0.41
THUMPD2-201ENST00000378727 SERPINB9P50453 376 aa17.59■□□□□ 0.41
THUMPD2-201ENST00000378727 EPHA5P54756 1037 aa17.59■□□□□ 0.41
THUMPD2-201ENST00000378727 ZNF235Q14590 738 aa17.59■□□□□ 0.41
THUMPD2-201ENST00000378727 QPCTQ16769 361 aa17.59■□□□□ 0.41
THUMPD2-201ENST00000378727 MROH9Q5TGP6 573 aa17.59■□□□□ 0.41
THUMPD2-201ENST00000378727 PKN3Q6P5Z2 889 aa17.59■□□□□ 0.41
THUMPD2-201ENST00000378727 HTR3DQ70Z44 454 aa17.59■□□□□ 0.41
THUMPD2-201ENST00000378727 SHKBP1Q8TBC3 707 aa17.59■□□□□ 0.41
THUMPD2-201ENST00000378727 ALKBH8Q96BT7 664 aaKnown RBP17.59■□□□□ 0.41
THUMPD2-201ENST00000378727 TCEAL4Q96EI5 215 aa17.59■□□□□ 0.41
THUMPD2-201ENST00000378727 GCNAQ96QF7 691 aa17.59■□□□□ 0.41
THUMPD2-201ENST00000378727 POLR1EQ9GZS1 481 aaKnown RBP17.59■□□□□ 0.41
THUMPD2-201ENST00000378727 ZFATQ9P243 1243 aa17.59■□□□□ 0.41
THUMPD2-201ENST00000378727 GRID1Q9ULK0 1009 aa17.59■□□□□ 0.41
THUMPD2-201ENST00000378727 CLASP2O75122 1294 aaKnown RBP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms