RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 CES3Q6UWW8 571 aa19.73■□□□□ 0.75
SSU72-204ENST00000378726 KLHDC8BQ8IXV7 354 aa19.73■□□□□ 0.75
SSU72-204ENST00000378726 PSMG2Q969U7 264 aa19.73■□□□□ 0.75
SSU72-204ENST00000378726 KLF6Q99612 283 aaPredicted RBP19.73■□□□□ 0.75
SSU72-204ENST00000378726 ZBP1Q9H171 429 aa19.73■□□□□ 0.75
SSU72-204ENST00000378726 NPHS2Q9NP85 383 aa19.73■□□□□ 0.75
SSU72-204ENST00000378726 CXXC1Q9P0U4 656 aaPredicted RBP19.73■□□□□ 0.75
SSU72-204ENST00000378726 MAFFQ9ULX9 164 aa19.73■□□□□ 0.75
SSU72-204ENST00000378726 INSL6Q9Y581 213 aa19.73■□□□□ 0.75
SSU72-204ENST00000378726 RPS6KL1Q9Y6S9 549 aa19.73■□□□□ 0.75
SSU72-204ENST00000378726 GOLGA8RI6L899 631 aa19.72■□□□□ 0.75
SSU72-204ENST00000378726 KLKB1P03952 638 aa19.72■□□□□ 0.75
SSU72-204ENST00000378726 LINC00271P0C7V0 271 aa19.72■□□□□ 0.75
SSU72-204ENST00000378726 TPH1P17752 444 aa19.72■□□□□ 0.75
SSU72-204ENST00000378726 CALB2P22676 271 aa19.72■□□□□ 0.75
SSU72-204ENST00000378726 TAF11Q15544 211 aa19.72■□□□□ 0.75
SSU72-204ENST00000378726 NLRP9Q7RTR0 991 aa19.72■□□□□ 0.75
SSU72-204ENST00000378726 LINC00523Q86TU6 105 aa19.72■□□□□ 0.75
SSU72-204ENST00000378726 KLHL23Q8NBE8 558 aa19.72■□□□□ 0.75
SSU72-204ENST00000378726 PLD4Q96BZ4 506 aa19.72■□□□□ 0.75
SSU72-204ENST00000378726 UXTQ9UBK9 157 aaPredicted RBP19.72■□□□□ 0.75
SSU72-204ENST00000378726 STK39Q9UEW8 545 aa19.72■□□□□ 0.75
SSU72-204ENST00000378726 ATP9BO43861 1147 aa19.72■□□□□ 0.75
SSU72-204ENST00000378726 KRT37O76014 449 aa19.72■□□□□ 0.75
SSU72-204ENST00000378726 STC2O76061 302 aa19.72■□□□□ 0.75
SSU72-204ENST00000378726 CXCL14O95715 111 aa19.72■□□□□ 0.75
SSU72-204ENST00000378726 ADRA1DP25100 572 aa19.72■□□□□ 0.75
SSU72-204ENST00000378726 ABL2P42684 1182 aa19.72■□□□□ 0.75
SSU72-204ENST00000378726 MAPKAPK2P49137 400 aa19.72■□□□□ 0.75
SSU72-204ENST00000378726 FPGSQ05932 587 aa19.72■□□□□ 0.75
SSU72-204ENST00000378726 CDH17Q12864 832 aa19.72■□□□□ 0.75
SSU72-204ENST00000378726 C5orf22Q49AR2 442 aa19.72■□□□□ 0.75
SSU72-204ENST00000378726 MARC1Q5VT66 337 aa19.72■□□□□ 0.75
SSU72-204ENST00000378726 PABPC5Q96DU9 382 aaKnown RBP19.72■□□□□ 0.75
SSU72-204ENST00000378726 SP110Q9HB58 689 aa19.72■□□□□ 0.75
SSU72-204ENST00000378726 SSU72Q9NP77 194 aaKnown RBP19.72■□□□□ 0.75
SSU72-204ENST00000378726 ZFP69BQ9UJL9 534 aa19.72■□□□□ 0.75
SSU72-204ENST00000378726 SSX2IPQ9Y2D8 614 aa19.72■□□□□ 0.75
SSU72-204ENST00000378726 MAGEB16A2A368 324 aa19.71■□□□□ 0.75
SSU72-204ENST00000378726 AP3B1O00203 1094 aa19.71■□□□□ 0.75
SSU72-204ENST00000378726 TGM5O43548 720 aa19.71■□□□□ 0.75
SSU72-204ENST00000378726 SNRPAP09012 282 aaKnown RBP19.71■□□□□ 0.75
SSU72-204ENST00000378726 YBEYP58557 167 aaPredicted RBP19.71■□□□□ 0.75
SSU72-204ENST00000378726 CREMQ03060 361 aa19.71■□□□□ 0.75
SSU72-204ENST00000378726 PARP15Q460N3 678 aa19.71■□□□□ 0.75
SSU72-204ENST00000378726 TMEM150AQ86TG1 271 aa19.71■□□□□ 0.75
SSU72-204ENST00000378726 MTDHQ86UE4 582 aaKnown RBP19.71■□□□□ 0.75
SSU72-204ENST00000378726 TTC8Q8TAM2 541 aa19.71■□□□□ 0.75
SSU72-204ENST00000378726 FATE1Q969F0 183 aa19.71■□□□□ 0.75
SSU72-204ENST00000378726 AZIN2Q96A70 460 aa19.71■□□□□ 0.75
SSU72-204ENST00000378726 SERAC1Q96JX3 654 aa19.71■□□□□ 0.75
SSU72-204ENST00000378726 FCRL3Q96P31 734 aaPredicted RBP19.71■□□□□ 0.75
SSU72-204ENST00000378726 KLHL5Q96PQ7 755 aa19.71■□□□□ 0.75
SSU72-204ENST00000378726 KLF16Q9BXK1 252 aaPredicted RBP19.71■□□□□ 0.75
SSU72-204ENST00000378726 ZFP37Q9Y6Q3 630 aaPredicted RBP19.71■□□□□ 0.75
SSU72-204ENST00000378726 DOCK4Q8N1I0 1966 aa19.71■□□□□ 0.75
SSU72-204ENST00000378726 ZWINTO95229 277 aa19.71■□□□□ 0.75
SSU72-204ENST00000378726 F11P03951 625 aa19.71■□□□□ 0.75
SSU72-204ENST00000378726 TPBGLP0DKB5 382 aa19.71■□□□□ 0.75
SSU72-204ENST00000378726 CORO1AP31146 461 aaKnown RBP19.71■□□□□ 0.75
SSU72-204ENST00000378726 GEMP55040 296 aa19.71■□□□□ 0.75
SSU72-204ENST00000378726 SLC10A7Q0GE19 358 aa19.71■□□□□ 0.75
SSU72-204ENST00000378726 SPANXN3Q5MJ09 141 aa19.71■□□□□ 0.75
SSU72-204ENST00000378726 TMC7Q7Z402 723 aa19.71■□□□□ 0.75
SSU72-204ENST00000378726 IPMKQ8NFU5 416 aa19.71■□□□□ 0.75
SSU72-204ENST00000378726 RFWD2Q8NHY2 731 aa19.71■□□□□ 0.75
SSU72-204ENST00000378726 CDKL2Q92772 493 aa19.71■□□□□ 0.75
SSU72-204ENST00000378726 CLP1Q92989 425 aaKnown RBP19.71■□□□□ 0.75
SSU72-204ENST00000378726 ALKBH8Q96BT7 664 aaKnown RBP19.71■□□□□ 0.75
SSU72-204ENST00000378726 CYP2S1Q96SQ9 504 aa19.71■□□□□ 0.75
SSU72-204ENST00000378726 FAM167BQ9BTA0 163 aa19.71■□□□□ 0.75
SSU72-204ENST00000378726 IL22Q9GZX6 179 aa19.71■□□□□ 0.75
SSU72-204ENST00000378726 TRIM49D1C9J1S8 452 aa19.7■□□□□ 0.74
SSU72-204ENST00000378726 SMNDC1O75940 238 aaKnown RBP eCLIP19.7■□□□□ 0.74
SSU72-204ENST00000378726 KRT38O76015 456 aa19.7■□□□□ 0.74
SSU72-204ENST00000378726 HSPA1AP0DMV8 641 aaKnown RBP19.7■□□□□ 0.74
SSU72-204ENST00000378726 HSPA1BP0DMV9 641 aaKnown RBP19.7■□□□□ 0.74
SSU72-204ENST00000378726 IRF1P10914 325 aa19.7■□□□□ 0.74
SSU72-204ENST00000378726 ACVRL1P37023 503 aa19.7■□□□□ 0.74
SSU72-204ENST00000378726 OVGP1Q12889 678 aa19.7■□□□□ 0.74
SSU72-204ENST00000378726 SERINC3Q13530 473 aa19.7■□□□□ 0.74
SSU72-204ENST00000378726 TMEM240Q5SV17 173 aa19.7■□□□□ 0.74
SSU72-204ENST00000378726 UBE2Q1Q7Z7E8 422 aa19.7■□□□□ 0.74
SSU72-204ENST00000378726 TMEM135Q86UB9 458 aa19.7■□□□□ 0.74
SSU72-204ENST00000378726 ITIH5Q86UX2 942 aa19.7■□□□□ 0.74
SSU72-204ENST00000378726 BANPQ8N9N5 519 aa19.7■□□□□ 0.74
SSU72-204ENST00000378726 TCP10LQ8TDR4 215 aa19.7■□□□□ 0.74
SSU72-204ENST00000378726 NAF1Q96HR8 494 aaKnown RBP19.7■□□□□ 0.74
SSU72-204ENST00000378726 PPP1R2P1Q96PQ5 205 aa19.7■□□□□ 0.74
SSU72-204ENST00000378726 TBL1YQ9BQ87 522 aa19.7■□□□□ 0.74
SSU72-204ENST00000378726 ZNF334Q9HCZ1 680 aaPredicted RBP19.7■□□□□ 0.74
SSU72-204ENST00000378726 NT5MQ9NPB1 228 aa19.7■□□□□ 0.74
SSU72-204ENST00000378726 DCTN4Q9UJW0 460 aa19.7■□□□□ 0.74
SSU72-204ENST00000378726 NYNRINQ9P2P1 1898 aaKnown RBP19.7■□□□□ 0.74
SSU72-204ENST00000378726 PMPCBO75439 489 aa19.7■□□□□ 0.74
SSU72-204ENST00000378726 PYGBP11216 843 aa19.7■□□□□ 0.74
SSU72-204ENST00000378726 ITKQ08881 620 aa19.7■□□□□ 0.74
SSU72-204ENST00000378726 WBP2Q969T9 261 aa19.7■□□□□ 0.74
SSU72-204ENST00000378726 NUDCD1Q96RS6 583 aa19.7■□□□□ 0.74
SSU72-204ENST00000378726 SLC25A51Q9H1U9 297 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms