RNA–Protein interactions for RNA: ENST00000378512.5

RER1-202, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 1 (best) BASIC

Gene RER1, Length 1,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-202ENST00000378512 C1QTNF3-AMACRE9PGA6 284 aa17.33■□□□□ 0.36
RER1-202ENST00000378512 RNF103O00237 685 aa17.33■□□□□ 0.36
RER1-202ENST00000378512 BCAT2O15382 392 aaPredicted RBP17.33■□□□□ 0.36
RER1-202ENST00000378512 PLRG1O43660 514 aaKnown RBP17.33■□□□□ 0.36
RER1-202ENST00000378512 PRPSAP2O60256 369 aa17.33■□□□□ 0.36
RER1-202ENST00000378512 IL1R2P27930 398 aa17.33■□□□□ 0.36
RER1-202ENST00000378512 CHRNA3P32297 505 aa17.33■□□□□ 0.36
RER1-202ENST00000378512 CCR5P51681 352 aa17.33■□□□□ 0.36
RER1-202ENST00000378512 DPYSL2Q16555 572 aa17.33■□□□□ 0.36
RER1-202ENST00000378512 PARP15Q460N3 678 aa17.33■□□□□ 0.36
RER1-202ENST00000378512 AGBL4Q5VU57 503 aa17.33■□□□□ 0.36
RER1-202ENST00000378512 KIAA0895LQ68EN5 471 aa17.33■□□□□ 0.36
RER1-202ENST00000378512 NCEH1Q6PIU2 408 aa17.33■□□□□ 0.36
RER1-202ENST00000378512 DPY19L3Q6ZPD9 716 aa17.33■□□□□ 0.36
RER1-202ENST00000378512 CHCHD4Q8N4Q1 142 aa17.33■□□□□ 0.36
RER1-202ENST00000378512 KCTD15Q96SI1 283 aaPredicted RBP17.33■□□□□ 0.36
RER1-202ENST00000378512 NUP85Q9BW27 656 aa17.33■□□□□ 0.36
RER1-202ENST00000378512 DHX35Q9H5Z1 703 aaKnown RBP17.33■□□□□ 0.36
RER1-202ENST00000378512 DONSONQ9NYP3 566 aa17.33■□□□□ 0.36
RER1-202ENST00000378512 PCSK1NQ9UHG2 260 aa17.33■□□□□ 0.36
RER1-202ENST00000378512 TPX2Q9ULW0 747 aaKnown RBP17.33■□□□□ 0.36
RER1-202ENST00000378512 FNDC3AQ9Y2H6 1198 aaKnown RBP17.33■□□□□ 0.36
RER1-202ENST00000378512 ACTL7AQ9Y615 435 aa17.33■□□□□ 0.36
RER1-202ENST00000378512 WASF2Q9Y6W5 498 aa17.33■□□□□ 0.36
RER1-202ENST00000378512 A0A1B0GVT2 93 aa17.32■□□□□ 0.36
RER1-202ENST00000378512 LRRC72A6NJI9 287 aa17.32■□□□□ 0.36
RER1-202ENST00000378512 LATO43561 262 aa17.32■□□□□ 0.36
RER1-202ENST00000378512 TCF4P15884 667 aa17.32■□□□□ 0.36
RER1-202ENST00000378512 CD27P26842 260 aa17.32■□□□□ 0.36
RER1-202ENST00000378512 CSNK1EP49674 416 aaKnown RBP17.32■□□□□ 0.36
RER1-202ENST00000378512 NDST2P52849 883 aa17.32■□□□□ 0.36
RER1-202ENST00000378512 TPI1P60174 286 aa17.32■□□□□ 0.36
RER1-202ENST00000378512 SLC25A11Q02978 314 aaKnown RBP17.32■□□□□ 0.36
RER1-202ENST00000378512 SERINC3Q13530 473 aa17.32■□□□□ 0.36
RER1-202ENST00000378512 BOLA3Q53S33 107 aa17.32■□□□□ 0.36
RER1-202ENST00000378512 INO80DQ53TQ3 878 aaPredicted RBP17.32■□□□□ 0.36
RER1-202ENST00000378512 AFMIDQ63HM1 303 aa17.32■□□□□ 0.36
RER1-202ENST00000378512 NAXDQ8IW45 347 aa17.32■□□□□ 0.36
RER1-202ENST00000378512 PNPLA1Q8N8W4 532 aa17.32■□□□□ 0.36
RER1-202ENST00000378512 CHST14Q8NCH0 376 aa17.32■□□□□ 0.36
RER1-202ENST00000378512 CHP1Q99653 195 aa17.32■□□□□ 0.36
RER1-202ENST00000378512 ZDHHC5Q9C0B5 715 aa17.32■□□□□ 0.36
RER1-202ENST00000378512 EBF2Q9HAK2 575 aa17.32■□□□□ 0.36
RER1-202ENST00000378512 IP6K2Q9UHH9 426 aa17.32■□□□□ 0.36
RER1-202ENST00000378512 ZMIZ1Q9ULJ6 1067 aa17.32■□□□□ 0.36
RER1-202ENST00000378512 HPCAL4Q9UM19 191 aa17.32■□□□□ 0.36
RER1-202ENST00000378512 FARP1Q9Y4F1 1045 aaPredicted RBP17.32■□□□□ 0.36
RER1-202ENST00000378512 CHD6Q8TD26 2715 aa17.32■□□□□ 0.36
RER1-202ENST00000378512 A0A1W2PPC4 97 aa17.31■□□□□ 0.36
RER1-202ENST00000378512 RASA4BC9J798 803 aa17.31■□□□□ 0.36
RER1-202ENST00000378512 RASA4O43374 803 aa17.31■□□□□ 0.36
RER1-202ENST00000378512 PRNPP04156 253 aa17.31■□□□□ 0.36
RER1-202ENST00000378512 TAS2R38P59533 333 aa17.31■□□□□ 0.36
RER1-202ENST00000378512 CNTN1Q12860 1018 aa17.31■□□□□ 0.36
RER1-202ENST00000378512 DPYSQ14117 519 aa17.31■□□□□ 0.36
RER1-202ENST00000378512 CARD16Q5EG05 197 aa17.31■□□□□ 0.36
RER1-202ENST00000378512 PIP5KL1Q5T9C9 394 aa17.31■□□□□ 0.36
RER1-202ENST00000378512 RFX8Q6ZV50 586 aa17.31■□□□□ 0.36
RER1-202ENST00000378512 FAM71BQ8TC56 605 aa17.31■□□□□ 0.36
RER1-202ENST00000378512 GANCQ8TET4 914 aa17.31■□□□□ 0.36
RER1-202ENST00000378512 TEKT4Q8WW24 435 aa17.31■□□□□ 0.36
RER1-202ENST00000378512 CASKIN2Q8WXE0 1202 aa17.31■□□□□ 0.36
RER1-202ENST00000378512 HMCESQ96FZ2 354 aa17.31■□□□□ 0.36
RER1-202ENST00000378512 TNKS2Q9H2K2 1166 aa17.31■□□□□ 0.36
RER1-202ENST00000378512 GAREM1Q9H706 876 aa17.31■□□□□ 0.36
RER1-202ENST00000378512 PDFQ9HBH1 243 aa17.31■□□□□ 0.36
RER1-202ENST00000378512 CWC15Q9P013 229 aaKnown RBP17.31■□□□□ 0.36
RER1-202ENST00000378512 IL36AQ9UHA7 158 aa17.31■□□□□ 0.36
RER1-202ENST00000378512 ANAPC7Q9UJX3 599 aa17.31■□□□□ 0.36
RER1-202ENST00000378512 FCF1Q9Y324 198 aaKnown RBP17.31■□□□□ 0.36
RER1-202ENST00000378512 KNL1Q8NG31 2342 aa17.31■□□□□ 0.36
RER1-202ENST00000378512 EEF2KO00418 725 aaKnown RBP17.3■□□□□ 0.36
RER1-202ENST00000378512 KCNK3O14649 394 aa17.3■□□□□ 0.36
RER1-202ENST00000378512 GSRP00390 522 aa17.3■□□□□ 0.36
RER1-202ENST00000378512 GRIA4P48058 902 aa17.3■□□□□ 0.36
RER1-202ENST00000378512 ADKP55263 362 aaKnown RBP17.3■□□□□ 0.36
RER1-202ENST00000378512 TRIP6Q15654 476 aaKnown RBP17.3■□□□□ 0.36
RER1-202ENST00000378512 HLA-BQ31612 363 aa17.3■□□□□ 0.36
RER1-202ENST00000378512 KCNT1Q5JUK3 1230 aa17.3■□□□□ 0.36
RER1-202ENST00000378512 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.3■□□□□ 0.36
RER1-202ENST00000378512 CNGA4Q8IV77 575 aa17.3■□□□□ 0.36
RER1-202ENST00000378512 OR14C36Q8NHC7 312 aa17.3■□□□□ 0.36
RER1-202ENST00000378512 ARRDC3Q96B67 414 aa17.3■□□□□ 0.36
RER1-202ENST00000378512 BTBD6Q96KE9 485 aa17.3■□□□□ 0.36
RER1-202ENST00000378512 HEPHQ9BQS7 1158 aa17.3■□□□□ 0.36
RER1-202ENST00000378512 PACSIN1Q9BY11 444 aa17.3■□□□□ 0.36
RER1-202ENST00000378512 HDAC8Q9BY41 377 aa17.3■□□□□ 0.36
RER1-202ENST00000378512 TM9SF3Q9HD45 589 aa17.3■□□□□ 0.36
RER1-202ENST00000378512 UVRAGQ9P2Y5 699 aa17.3■□□□□ 0.36
RER1-202ENST00000378512 PLK4O00444 970 aa17.3■□□□□ 0.36
RER1-202ENST00000378512 CBFA2T3O75081 653 aa17.3■□□□□ 0.36
RER1-202ENST00000378512 LEFTY1O75610 366 aa17.3■□□□□ 0.36
RER1-202ENST00000378512 FSBPO95073 299 aa17.3■□□□□ 0.36
RER1-202ENST00000378512 TPM1P09493 284 aa17.3■□□□□ 0.36
RER1-202ENST00000378512 H2AFZP0C0S5 128 aa17.3■□□□□ 0.36
RER1-202ENST00000378512 RARAP10276 462 aa17.3■□□□□ 0.36
RER1-202ENST00000378512 ERCC2P18074 760 aa17.3■□□□□ 0.36
RER1-202ENST00000378512 AFF3P51826 1226 aaKnown RBP17.3■□□□□ 0.36
RER1-202ENST00000378512 CCNHP51946 323 aaPredicted RBP17.3■□□□□ 0.36
RER1-202ENST00000378512 SLC14A1Q13336 389 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms