RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 AZIN2Q96A70 460 aa13.35□□□□□ -0.27
NPHP4-203ENST00000378169 PPP1R10Q96QC0 940 aaKnown RBP13.35□□□□□ -0.27
NPHP4-203ENST00000378169 SEPHS2Q99611 448 aa13.35□□□□□ -0.27
NPHP4-203ENST00000378169 CCT7Q99832 543 aa13.35□□□□□ -0.27
NPHP4-203ENST00000378169 NMUR2Q9GZQ4 415 aa13.35□□□□□ -0.27
NPHP4-203ENST00000378169 TMPRSS4Q9NRS4 437 aa13.35□□□□□ -0.27
NPHP4-203ENST00000378169 RABGEF1Q9UJ41 708 aa13.35□□□□□ -0.27
NPHP4-203ENST00000378169 CHKBQ9Y259 395 aa13.35□□□□□ -0.27
NPHP4-203ENST00000378169 LAMB4A4D0S4 1761 aa13.35□□□□□ -0.27
NPHP4-203ENST00000378169 SEPT4O43236 478 aa13.35□□□□□ -0.27
NPHP4-203ENST00000378169 LTA4HP09960 611 aaKnown RBP13.35□□□□□ -0.27
NPHP4-203ENST00000378169 WNT7BP56706 349 aa13.35□□□□□ -0.27
NPHP4-203ENST00000378169 NCALDP61601 193 aa13.35□□□□□ -0.27
NPHP4-203ENST00000378169 BRMS1LQ5PSV4 323 aa13.35□□□□□ -0.27
NPHP4-203ENST00000378169 WASHC2DQ5SRD0 308 aa13.35□□□□□ -0.27
NPHP4-203ENST00000378169 VPS37AQ8NEZ2 397 aa13.35□□□□□ -0.27
NPHP4-203ENST00000378169 ACMSDQ8TDX5 336 aa13.35□□□□□ -0.27
NPHP4-203ENST00000378169 RSPH1Q8WYR4 309 aa13.35□□□□□ -0.27
NPHP4-203ENST00000378169 DACT3Q96B18 629 aaPredicted RBP13.35□□□□□ -0.27
NPHP4-203ENST00000378169 HPS4Q9NQG7 708 aa13.35□□□□□ -0.27
NPHP4-203ENST00000378169 ZNF212Q9UDV6 495 aa13.35□□□□□ -0.27
NPHP4-203ENST00000378169 SOAT1P35610 550 aa13.35□□□□□ -0.27
NPHP4-203ENST00000378169 RAB10P61026 200 aa13.35□□□□□ -0.27
NPHP4-203ENST00000378169 MRPS22P82650 360 aaKnown RBP13.35□□□□□ -0.27
NPHP4-203ENST00000378169 SLC34A1Q06495 639 aa13.35□□□□□ -0.27
NPHP4-203ENST00000378169 CDK18Q07002 472 aa13.35□□□□□ -0.27
NPHP4-203ENST00000378169 ENPEPQ07075 957 aa13.35□□□□□ -0.27
NPHP4-203ENST00000378169 HSPA14Q0VDF9 509 aa13.35□□□□□ -0.27
NPHP4-203ENST00000378169 LRRC8BQ6P9F7 803 aa13.35□□□□□ -0.27
NPHP4-203ENST00000378169 GRIN3AQ8TCU5 1115 aa13.35□□□□□ -0.27
NPHP4-203ENST00000378169 CD99L2Q8TCZ2 262 aa13.35□□□□□ -0.27
NPHP4-203ENST00000378169 TRPC4APQ8TEL6 797 aa13.35□□□□□ -0.27
NPHP4-203ENST00000378169 C2orf49Q9BVC5 232 aaPredicted RBP13.35□□□□□ -0.27
NPHP4-203ENST00000378169 TMEM109Q9BVC6 243 aa13.35□□□□□ -0.27
NPHP4-203ENST00000378169 WDR55Q9H6Y2 383 aaPredicted RBP13.35□□□□□ -0.27
NPHP4-203ENST00000378169 GGA2Q9UJY4 613 aa13.35□□□□□ -0.27
NPHP4-203ENST00000378169 ADAM28Q9UKQ2 775 aa13.35□□□□□ -0.27
NPHP4-203ENST00000378169 PLLPQ9Y342 182 aa13.35□□□□□ -0.27
NPHP4-203ENST00000378169 PRR5-ARHGAP8B1AHC4 643 aa13.34□□□□□ -0.27
NPHP4-203ENST00000378169 FKBP6O75344 327 aa13.34□□□□□ -0.27
NPHP4-203ENST00000378169 ATG7O95352 703 aa13.34□□□□□ -0.27
NPHP4-203ENST00000378169 ARHGAP8P85298 464 aa13.34□□□□□ -0.27
NPHP4-203ENST00000378169 ADGRD1Q6QNK2 874 aa13.34□□□□□ -0.27
NPHP4-203ENST00000378169 RRM2BQ7LG56 351 aa13.34□□□□□ -0.27
NPHP4-203ENST00000378169 DBF4BQ8NFT6 615 aa13.34□□□□□ -0.27
NPHP4-203ENST00000378169 ZNF558Q96NG5 402 aa13.34□□□□□ -0.27
NPHP4-203ENST00000378169 RNPEPL1Q9HAU8 725 aa13.34□□□□□ -0.27
NPHP4-203ENST00000378169 VTI1BQ9UEU0 232 aa13.34□□□□□ -0.27
NPHP4-203ENST00000378169 ANKRD6Q9Y2G4 727 aa13.34□□□□□ -0.27
NPHP4-203ENST00000378169 DNM1LO00429 736 aa13.34□□□□□ -0.27
NPHP4-203ENST00000378169 BPGMP07738 259 aa13.34□□□□□ -0.27
NPHP4-203ENST00000378169 CTPS1P17812 591 aa13.34□□□□□ -0.27
NPHP4-203ENST00000378169 SKIV2L2P42285 1042 aaKnown RBP13.34□□□□□ -0.27
NPHP4-203ENST00000378169 STARD3Q14849 445 aa13.34□□□□□ -0.27
NPHP4-203ENST00000378169 USP41Q3LFD5 358 aa13.34□□□□□ -0.27
NPHP4-203ENST00000378169 PKN3Q6P5Z2 889 aa13.34□□□□□ -0.27
NPHP4-203ENST00000378169 DRICH1Q6PGQ1 229 aaPredicted RBP13.34□□□□□ -0.27
NPHP4-203ENST00000378169 CIR1Q86X95 450 aaPredicted RBP13.34□□□□□ -0.27
NPHP4-203ENST00000378169 QKIQ96PU8 341 aaKnown RBP eCLIP13.34□□□□□ -0.276e-11■■■■□ 19.4
NPHP4-203ENST00000378169 RBBP8Q99708 897 aa13.34□□□□□ -0.27
NPHP4-203ENST00000378169 TTPALQ9BTX7 342 aa13.34□□□□□ -0.27
NPHP4-203ENST00000378169 MLPHQ9BV36 600 aaPredicted RBP13.34□□□□□ -0.27
NPHP4-203ENST00000378169 ASB8Q9H765 288 aa13.34□□□□□ -0.27
NPHP4-203ENST00000378169 PARVBQ9HBI1 364 aa13.34□□□□□ -0.27
NPHP4-203ENST00000378169 C15orf41Q9Y2V0 281 aa13.34□□□□□ -0.27
NPHP4-203ENST00000378169 FAM32AQ9Y421 112 aaKnown RBP13.34□□□□□ -0.27
NPHP4-203ENST00000378169 KIAA0100Q14667 2235 aaKnown RBP13.34□□□□□ -0.27
NPHP4-203ENST00000378169 INPP4BO15327 924 aa13.34□□□□□ -0.27
NPHP4-203ENST00000378169 HDAC3O15379 428 aa13.34□□□□□ -0.27
NPHP4-203ENST00000378169 UGT1A9O60656 530 aa13.34□□□□□ -0.27
NPHP4-203ENST00000378169 PEX11AO75192 247 aa13.34□□□□□ -0.27
NPHP4-203ENST00000378169 CSH1P0DML2 217 aa13.34□□□□□ -0.27
NPHP4-203ENST00000378169 CSH2P0DML3 217 aa13.34□□□□□ -0.27
NPHP4-203ENST00000378169 RPL17P18621 184 aaKnown RBP13.34□□□□□ -0.27
NPHP4-203ENST00000378169 ATP5F1P24539 256 aaPredicted RBP13.34□□□□□ -0.27
NPHP4-203ENST00000378169 MSX2P35548 267 aaPredicted RBP13.34□□□□□ -0.27
NPHP4-203ENST00000378169 PSEN1P49768 467 aa13.34□□□□□ -0.27
NPHP4-203ENST00000378169 IL2P60568 153 aa13.34□□□□□ -0.27
NPHP4-203ENST00000378169 ARHGAP17Q68EM7 881 aa13.34□□□□□ -0.27
NPHP4-203ENST00000378169 CDCA2Q69YH5 1023 aaPredicted RBP13.34□□□□□ -0.27
NPHP4-203ENST00000378169 POTEHQ6S545 545 aa13.34□□□□□ -0.27
NPHP4-203ENST00000378169 ZNF786Q8N393 782 aa13.34□□□□□ -0.27
NPHP4-203ENST00000378169 TMEM130Q8N3G9 435 aa13.34□□□□□ -0.27
NPHP4-203ENST00000378169 B3GALT6Q96L58 329 aa13.34□□□□□ -0.27
NPHP4-203ENST00000378169 CORO1BQ9BR76 489 aa13.34□□□□□ -0.27
NPHP4-203ENST00000378169 HGH1Q9BTY7 390 aa13.34□□□□□ -0.27
NPHP4-203ENST00000378169 EMILIN2Q9BXX0 1053 aa13.34□□□□□ -0.27
NPHP4-203ENST00000378169 UGT1A7Q9HAW7 530 aa13.34□□□□□ -0.27
NPHP4-203ENST00000378169 UGT1A10Q9HAW8 530 aa13.34□□□□□ -0.27
NPHP4-203ENST00000378169 UGT1A8Q9HAW9 530 aa13.34□□□□□ -0.27
NPHP4-203ENST00000378169 MRPL17Q9NRX2 175 aaKnown RBP13.34□□□□□ -0.27
NPHP4-203ENST00000378169 RCOR3Q9P2K3 495 aaPredicted RBP13.34□□□□□ -0.27
NPHP4-203ENST00000378169 CROTQ9UKG9 612 aa13.34□□□□□ -0.27
NPHP4-203ENST00000378169 ADCY6O43306 1168 aa13.34□□□□□ -0.27
NPHP4-203ENST00000378169 TBL1XO60907 577 aa13.34□□□□□ -0.27
NPHP4-203ENST00000378169 SNAI1O95863 264 aaPredicted RBP13.34□□□□□ -0.27
NPHP4-203ENST00000378169 TPSB2P20231 275 aa13.34□□□□□ -0.27
NPHP4-203ENST00000378169 TPSAB1Q15661 275 aa13.34□□□□□ -0.27
NPHP4-203ENST00000378169 ZBTB49Q6ZSB9 765 aa13.34□□□□□ -0.27
NPHP4-203ENST00000378169 ARCQ7LC44 396 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms