RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 BNIP3LO60238 219 aa13.46□□□□□ -0.25
CKAP2-202ENST00000378034 POP4O95707 220 aaKnown RBP13.46□□□□□ -0.25
CKAP2-202ENST00000378034 FTCDO95954 541 aa13.46□□□□□ -0.25
CKAP2-202ENST00000378034 IGSF6O95976 241 aa13.46□□□□□ -0.25
CKAP2-202ENST00000378034 IL1BP01584 269 aa13.46□□□□□ -0.25
CKAP2-202ENST00000378034 TGM2P21980 687 aa13.46□□□□□ -0.25
CKAP2-202ENST00000378034 CCNCP24863 283 aa13.46□□□□□ -0.25
CKAP2-202ENST00000378034 HSPA9P38646 679 aaKnown RBP13.46□□□□□ -0.25
CKAP2-202ENST00000378034 DNA2P51530 1060 aa13.46□□□□□ -0.25
CKAP2-202ENST00000378034 RENBPP51606 427 aa13.46□□□□□ -0.25
CKAP2-202ENST00000378034 RHOAP61586 193 aa13.46□□□□□ -0.25
CKAP2-202ENST00000378034 GBE1Q04446 702 aa13.46□□□□□ -0.25
CKAP2-202ENST00000378034 RAD51Q06609 339 aa13.46□□□□□ -0.25
CKAP2-202ENST00000378034 SIM2Q14190 667 aaPredicted RBP13.46□□□□□ -0.25
CKAP2-202ENST00000378034 SPDYCQ5MJ68 293 aa13.46□□□□□ -0.25
CKAP2-202ENST00000378034 DPY19L3Q6ZPD9 716 aa13.46□□□□□ -0.25
CKAP2-202ENST00000378034 ARHGAP36Q6ZRI8 547 aa13.46□□□□□ -0.25
CKAP2-202ENST00000378034 BBS5Q8N3I7 341 aa13.46□□□□□ -0.25
CKAP2-202ENST00000378034 NETO2Q8NC67 525 aa13.46□□□□□ -0.25
CKAP2-202ENST00000378034 HDAC11Q96DB2 347 aa13.46□□□□□ -0.25
CKAP2-202ENST00000378034 SEPT3Q9UH03 358 aa13.46□□□□□ -0.25
CKAP2-202ENST00000378034 IL36AQ9UHA7 158 aa13.46□□□□□ -0.25
CKAP2-202ENST00000378034 RAPGEFL1Q9UHV5 662 aa13.46□□□□□ -0.25
CKAP2-202ENST00000378034 IGHV1OR15-9A0A0B4J2B8 117 aa13.45□□□□□ -0.26
CKAP2-202ENST00000378034 DDX3YO15523 660 aaKnown RBP13.45□□□□□ -0.26
CKAP2-202ENST00000378034 CST8O60676 142 aa13.45□□□□□ -0.26
CKAP2-202ENST00000378034 RHOBTB1O94844 696 aa13.45□□□□□ -0.26
CKAP2-202ENST00000378034 CSNK1DP48730 415 aa13.45□□□□□ -0.26
CKAP2-202ENST00000378034 CCNHP51946 323 aaPredicted RBP13.45□□□□□ -0.26
CKAP2-202ENST00000378034 NSUN2Q08J23 767 aaKnown RBP eCLIP13.45□□□□□ -0.26
CKAP2-202ENST00000378034 CCDC15Q0P6D6 951 aa13.45□□□□□ -0.26
CKAP2-202ENST00000378034 SLC10A2Q12908 348 aaPredicted RBP13.45□□□□□ -0.26
CKAP2-202ENST00000378034 HNRNPDQ14103 355 aaKnown RBP13.45□□□□□ -0.26
CKAP2-202ENST00000378034 LBRQ14739 615 aaKnown RBP13.45□□□□□ -0.26
CKAP2-202ENST00000378034 GRM3Q14832 879 aa13.45□□□□□ -0.26
CKAP2-202ENST00000378034 PDK1Q15118 436 aa13.45□□□□□ -0.26
CKAP2-202ENST00000378034 MYLK3Q32MK0 819 aa13.45□□□□□ -0.26
CKAP2-202ENST00000378034 PIP4K2CQ8TBX8 421 aa13.45□□□□□ -0.26
CKAP2-202ENST00000378034 ALG3Q92685 438 aa13.45□□□□□ -0.26
CKAP2-202ENST00000378034 PSKH2Q96QS6 385 aa13.45□□□□□ -0.26
CKAP2-202ENST00000378034 CINPQ9BW66 212 aaPredicted RBP13.45□□□□□ -0.26
CKAP2-202ENST00000378034 FAM86C1Q9NVL1 165 aa13.45□□□□□ -0.26
CKAP2-202ENST00000378034 HAUS2Q9NVX0 235 aa13.45□□□□□ -0.26
CKAP2-202ENST00000378034 LHX3Q9UBR4 397 aa13.45□□□□□ -0.26
CKAP2-202ENST00000378034 AMACRQ9UHK6 382 aa13.45□□□□□ -0.26
CKAP2-202ENST00000378034 RAB23Q9ULC3 237 aa13.45□□□□□ -0.26
CKAP2-202ENST00000378034 FZD4Q9ULV1 537 aa13.45□□□□□ -0.26
CKAP2-202ENST00000378034 CYP8B1Q9UNU6 501 aa13.45□□□□□ -0.26
CKAP2-202ENST00000378034 PPP1R12AO14974 1030 aaPredicted RBP13.45□□□□□ -0.26
CKAP2-202ENST00000378034 MATN3O15232 486 aa13.45□□□□□ -0.26
CKAP2-202ENST00000378034 MID1O15344 667 aa13.45□□□□□ -0.26
CKAP2-202ENST00000378034 MAP3K13O43283 966 aa13.45□□□□□ -0.26
CKAP2-202ENST00000378034 PEX11BO96011 259 aa13.45□□□□□ -0.26
CKAP2-202ENST00000378034 KRT10P13645 584 aa13.45□□□□□ -0.26
CKAP2-202ENST00000378034 CD6P30203 668 aa13.45□□□□□ -0.26
CKAP2-202ENST00000378034 PSMD8P48556 350 aa13.45□□□□□ -0.26
CKAP2-202ENST00000378034 SRSF5Q13243 272 aaKnown RBP13.45□□□□□ -0.26
CKAP2-202ENST00000378034 MEI1Q5TIA1 1274 aa13.45□□□□□ -0.26
CKAP2-202ENST00000378034 MARC1Q5VT66 337 aa13.45□□□□□ -0.26
CKAP2-202ENST00000378034 BBS12Q6ZW61 710 aa13.45□□□□□ -0.26
CKAP2-202ENST00000378034 CHST14Q8NCH0 376 aa13.45□□□□□ -0.26
CKAP2-202ENST00000378034 RLN3Q8WXF3 142 aa13.45□□□□□ -0.26
CKAP2-202ENST00000378034 PPP1R16AQ96I34 528 aa13.45□□□□□ -0.26
CKAP2-202ENST00000378034 OSBPL1AQ9BXW6 950 aa13.45□□□□□ -0.26
CKAP2-202ENST00000378034 OSBPL8Q9BZF1 889 aa13.45□□□□□ -0.26
CKAP2-202ENST00000378034 TM6SF2Q9BZW4 377 aa13.45□□□□□ -0.26
CKAP2-202ENST00000378034 SGK2Q9HBY8 427 aa13.45□□□□□ -0.26
CKAP2-202ENST00000378034 FBXL12Q9NXK8 326 aa13.45□□□□□ -0.26
CKAP2-202ENST00000378034 WSB2Q9NYS7 404 aaPredicted RBP13.45□□□□□ -0.26
CKAP2-202ENST00000378034 HEY1Q9Y5J3 304 aa13.45□□□□□ -0.26
CKAP2-202ENST00000378034 WASF2Q9Y6W5 498 aa13.45□□□□□ -0.26
CKAP2-202ENST00000378034 WDFY4Q6ZS81 3184 aa13.44□□□□□ -0.26
CKAP2-202ENST00000378034 SLC7A4O43246 635 aa13.44□□□□□ -0.26
CKAP2-202ENST00000378034 CTSLP07711 333 aa13.44□□□□□ -0.26
CKAP2-202ENST00000378034 PYGMP11217 842 aa13.44□□□□□ -0.26
CKAP2-202ENST00000378034 MAPK8P45983 427 aa13.44□□□□□ -0.26
CKAP2-202ENST00000378034 PPIDQ08752 370 aaKnown RBP13.44□□□□□ -0.26
CKAP2-202ENST00000378034 ELF2Q15723 593 aa13.44□□□□□ -0.26
CKAP2-202ENST00000378034 KAZNQ674X7 775 aa13.44□□□□□ -0.26
CKAP2-202ENST00000378034 CACUL1Q86Y37 369 aa13.44□□□□□ -0.26
CKAP2-202ENST00000378034 REXO1L1PQ8IX06 675 aa13.44□□□□□ -0.26
CKAP2-202ENST00000378034 RYBPQ8N488 228 aaPredicted RBP13.44□□□□□ -0.26
CKAP2-202ENST00000378034 TEX26Q8N6G2 289 aa13.44□□□□□ -0.26
CKAP2-202ENST00000378034 MAML1Q92585 1016 aa13.44□□□□□ -0.26
CKAP2-202ENST00000378034 P3H4Q92791 437 aa13.44□□□□□ -0.26
CKAP2-202ENST00000378034 NKD2Q969F2 451 aaPredicted RBP13.44□□□□□ -0.26
CKAP2-202ENST00000378034 FAM131CQ96AQ9 280 aa13.44□□□□□ -0.26
CKAP2-202ENST00000378034 LOXL4Q96JB6 756 aa13.44□□□□□ -0.26
CKAP2-202ENST00000378034 OLFM3Q96PB7 478 aa13.44□□□□□ -0.26
CKAP2-202ENST00000378034 OMDQ99983 421 aa13.44□□□□□ -0.26
CKAP2-202ENST00000378034 CPEB1Q9BZB8 566 aaKnown RBP13.44□□□□□ -0.26
CKAP2-202ENST00000378034 PCED1AQ9H1Q7 454 aa13.44□□□□□ -0.26
CKAP2-202ENST00000378034 MBD1Q9UIS9 605 aaPredicted RBP13.44□□□□□ -0.26
CKAP2-202ENST00000378034 SARDHQ9UL12 918 aa13.44□□□□□ -0.26
CKAP2-202ENST00000378034 PACSIN2Q9UNF0 486 aaPredicted RBP13.44□□□□□ -0.26
CKAP2-202ENST00000378034 GOLGA6L9A6NEM1 432 aa13.43□□□□□ -0.26
CKAP2-202ENST00000378034 APOC4-APOC2K7ER74 178 aa13.43□□□□□ -0.26
CKAP2-202ENST00000378034 NDUFS2O75306 463 aa13.43□□□□□ -0.26
CKAP2-202ENST00000378034 LEFTY1O75610 366 aa13.43□□□□□ -0.26
CKAP2-202ENST00000378034 TJP3O95049 919 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms