RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 GIMAP4Q9NUV9 329 aa8.87□□□□□ -0.99
PCDH9-202ENST00000377865 MKS1Q9NXB0 559 aa8.87□□□□□ -0.99
PCDH9-202ENST00000377865 AFF4Q9UHB7 1163 aaKnown RBP8.87□□□□□ -0.99
PCDH9-202ENST00000377865 PCDHB8Q9UN66 801 aa8.87□□□□□ -0.99
PCDH9-202ENST00000377865 FAM159BA6NKW6 160 aa8.87□□□□□ -0.99
PCDH9-202ENST00000377865 C5orf58C9J3I9 102 aa8.87□□□□□ -0.99
PCDH9-202ENST00000377865 KCNK1O00180 336 aa8.87□□□□□ -0.99
PCDH9-202ENST00000377865 NKRFO15226 690 aaKnown RBP eCLIP8.87□□□□□ -0.99
PCDH9-202ENST00000377865 ZNF862O60290 1169 aa8.87□□□□□ -0.99
PCDH9-202ENST00000377865 NRP2O60462 931 aa8.87□□□□□ -0.99
PCDH9-202ENST00000377865 CCNE2O96020 404 aa8.87□□□□□ -0.99
PCDH9-202ENST00000377865 PIGRP01833 764 aa8.87□□□□□ -0.99
PCDH9-202ENST00000377865 PGK2P07205 417 aa8.87□□□□□ -0.99
PCDH9-202ENST00000377865 GOT1P17174 413 aa8.87□□□□□ -0.99
PCDH9-202ENST00000377865 UBA1P22314 1058 aaKnown RBP8.87□□□□□ -0.99
PCDH9-202ENST00000377865 CCR1P32246 355 aa8.87□□□□□ -0.99
PCDH9-202ENST00000377865 KLF1Q13351 362 aaPredicted RBP8.87□□□□□ -0.99
PCDH9-202ENST00000377865 RFX4Q33E94 735 aa8.87□□□□□ -0.99
PCDH9-202ENST00000377865 NEPROQ6NW34 567 aa8.87□□□□□ -0.99
PCDH9-202ENST00000377865 ISLR2Q6UXK2 745 aa8.87□□□□□ -0.99
PCDH9-202ENST00000377865 SLC26A9Q7LBE3 791 aa8.87□□□□□ -0.99
PCDH9-202ENST00000377865 SPATA19Q7Z5L4 167 aa8.87□□□□□ -0.99
PCDH9-202ENST00000377865 DAW1Q8N136 415 aa8.87□□□□□ -0.99
PCDH9-202ENST00000377865 FNDC5Q8NAU1 212 aa8.87□□□□□ -0.99
PCDH9-202ENST00000377865 LMO3Q8TAP4 145 aa8.87□□□□□ -0.99
PCDH9-202ENST00000377865 SLC2A14Q8TDB8 520 aa8.87□□□□□ -0.99
PCDH9-202ENST00000377865 NIFKQ9BYG3 293 aaKnown RBP8.87□□□□□ -0.99
PCDH9-202ENST00000377865 APOBEC3GQ9HC16 384 aaKnown RBP8.87□□□□□ -0.99
PCDH9-202ENST00000377865 SNTG2Q9NY99 539 aa8.87□□□□□ -0.99
PCDH9-202ENST00000377865 UTP6Q9NYH9 597 aaKnown RBP8.87□□□□□ -0.99
PCDH9-202ENST00000377865 TAS2R13Q9NYV9 303 aa8.87□□□□□ -0.99
PCDH9-202ENST00000377865 MAGEL2Q9UJ55 1249 aa8.87□□□□□ -0.99
PCDH9-202ENST00000377865 UBR2Q8IWV8 1755 aa8.87□□□□□ -0.99
PCDH9-202ENST00000377865 STX7O15400 261 aaKnown RBP8.87□□□□□ -0.99
PCDH9-202ENST00000377865 ASLP04424 464 aa8.87□□□□□ -0.99
PCDH9-202ENST00000377865 NFKB1P19838 968 aa8.87□□□□□ -0.99
PCDH9-202ENST00000377865 MATKP42679 507 aa8.87□□□□□ -0.99
PCDH9-202ENST00000377865 PTPN9P43378 593 aa8.87□□□□□ -0.99
PCDH9-202ENST00000377865 SERPINH1P50454 418 aaKnown RBP8.87□□□□□ -0.99
PCDH9-202ENST00000377865 SEMA5AQ13591 1074 aa8.87□□□□□ -0.99
PCDH9-202ENST00000377865 EGFL6Q8IUX8 553 aa8.87□□□□□ -0.99
PCDH9-202ENST00000377865 PACRGLQ8N7B6 248 aa8.87□□□□□ -0.99
PCDH9-202ENST00000377865 MINDY2Q8NBR6 621 aa8.87□□□□□ -0.99
PCDH9-202ENST00000377865 DDX1Q92499 740 aaKnown RBP8.87□□□□□ -0.99
PCDH9-202ENST00000377865 DPY30Q9C005 99 aa8.87□□□□□ -0.99
PCDH9-202ENST00000377865 NT5MQ9NPB1 228 aa8.87□□□□□ -0.99
PCDH9-202ENST00000377865 PACSIN3Q9UKS6 424 aa8.87□□□□□ -0.99
PCDH9-202ENST00000377865 SIPA1L3O60292 1781 aaPredicted RBP8.87□□□□□ -0.99
PCDH9-202ENST00000377865 VNN1O95497 513 aa8.86□□□□□ -0.99
PCDH9-202ENST00000377865 BFSP2Q13515 415 aa8.86□□□□□ -0.99
PCDH9-202ENST00000377865 PCBP1Q15365 356 aaKnown RBP eCLIP8.86□□□□□ -0.99
PCDH9-202ENST00000377865 SIX1Q15475 284 aaPredicted RBP8.86□□□□□ -0.99
PCDH9-202ENST00000377865 MTX3Q5HYI7 312 aa8.86□□□□□ -0.99
PCDH9-202ENST00000377865 GK5Q6ZS86 529 aa8.86□□□□□ -0.99
PCDH9-202ENST00000377865 TTC30BQ8N4P2 665 aa8.86□□□□□ -0.99
PCDH9-202ENST00000377865 DRAXINQ8NBI3 349 aaPredicted RBP8.86□□□□□ -0.99
PCDH9-202ENST00000377865 DENND1AQ8TEH3 1009 aa8.86□□□□□ -0.99
PCDH9-202ENST00000377865 KCTD15Q96SI1 283 aaPredicted RBP8.86□□□□□ -0.99
PCDH9-202ENST00000377865 ELP3Q9H9T3 547 aa8.86□□□□□ -0.99
PCDH9-202ENST00000377865 AAASQ9NRG9 546 aa8.86□□□□□ -0.99
PCDH9-202ENST00000377865 PPM1HQ9ULR3 514 aa8.86□□□□□ -0.99
PCDH9-202ENST00000377865 AREL1O15033 823 aa8.86□□□□□ -0.99
PCDH9-202ENST00000377865 H6PDO95479 791 aa8.86□□□□□ -0.99
PCDH9-202ENST00000377865 MLYCDO95822 493 aa8.86□□□□□ -0.99
PCDH9-202ENST00000377865 CPB1P15086 417 aa8.86□□□□□ -0.99
PCDH9-202ENST00000377865 NR6A1Q15406 480 aa8.86□□□□□ -0.99
PCDH9-202ENST00000377865 LY6KQ17RY6 165 aa8.86□□□□□ -0.99
PCDH9-202ENST00000377865 INTS6LQ5JSJ4 861 aaKnown RBP8.86□□□□□ -0.99
PCDH9-202ENST00000377865 BBS7Q8IWZ6 715 aa8.86□□□□□ -0.99
PCDH9-202ENST00000377865 TMEM132CQ8N3T6 1108 aa8.86□□□□□ -0.99
PCDH9-202ENST00000377865 P2RY11Q96G91 374 aa8.86□□□□□ -0.99
PCDH9-202ENST00000377865 CSPG4P5Q96PW8 444 aa8.86□□□□□ -0.99
PCDH9-202ENST00000377865 TBCCD1Q9NVR7 557 aa8.86□□□□□ -0.99
PCDH9-202ENST00000377865 LIMD1Q9UGP4 676 aa8.86□□□□□ -0.99
PCDH9-202ENST00000377865 TBC1D30Q9Y2I9 924 aa8.86□□□□□ -0.99
PCDH9-202ENST00000377865 DPYSL4O14531 572 aa8.86□□□□□ -0.99
PCDH9-202ENST00000377865 RECQL5O94762 991 aaPredicted RBP8.86□□□□□ -0.99
PCDH9-202ENST00000377865 DLDP09622 509 aaKnown RBP8.86□□□□□ -0.99
PCDH9-202ENST00000377865 DNAJB1P25685 340 aa8.86□□□□□ -0.99
PCDH9-202ENST00000377865 TMEM62Q0P6H9 643 aa8.86□□□□□ -0.99
PCDH9-202ENST00000377865 CBX3Q13185 183 aa8.86□□□□□ -0.99
PCDH9-202ENST00000377865 MARC1Q5VT66 337 aa8.86□□□□□ -0.99
PCDH9-202ENST00000377865 ATRNL1Q5VV63 1379 aa8.86□□□□□ -0.99
PCDH9-202ENST00000377865 RSBN1Q5VWQ0 802 aaPredicted RBP8.86□□□□□ -0.99
PCDH9-202ENST00000377865 TXNDC11Q6PKC3 985 aa8.86□□□□□ -0.99
PCDH9-202ENST00000377865 POTEHQ6S545 545 aa8.86□□□□□ -0.99
PCDH9-202ENST00000377865 CMC1Q7Z7K0 106 aa8.86□□□□□ -0.99
PCDH9-202ENST00000377865 CLYBLQ8N0X4 340 aa8.86□□□□□ -0.99
PCDH9-202ENST00000377865 TMEM86AQ8N2M4 240 aa8.86□□□□□ -0.99
PCDH9-202ENST00000377865 OTUB1Q96FW1 271 aaPredicted RBP8.86□□□□□ -0.99
PCDH9-202ENST00000377865 LENG8Q96PV6 779 aaPredicted RBP8.86□□□□□ -0.99
PCDH9-202ENST00000377865 C3orf18Q9UK00 162 aa8.86□□□□□ -0.99
PCDH9-202ENST00000377865 TRPM3Q9HCF6 1732 aaPredicted RBP8.86□□□□□ -0.99
PCDH9-202ENST00000377865 NCF1BA6NI72 391 aaPredicted RBP8.86□□□□□ -0.99
PCDH9-202ENST00000377865 NCF1CA8MVU1 366 aaPredicted RBP8.86□□□□□ -0.99
PCDH9-202ENST00000377865 TADA2AO75478 443 aa8.86□□□□□ -0.99
PCDH9-202ENST00000377865 GPIP06744 558 aa8.86□□□□□ -0.99
PCDH9-202ENST00000377865 NCF1P14598 390 aaPredicted RBP8.86□□□□□ -0.99
PCDH9-202ENST00000377865 CACNB2Q08289 660 aaPredicted RBP8.86□□□□□ -0.99
PCDH9-202ENST00000377865 TRIM25Q14258 630 aaKnown RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms