RNA–Protein interactions for RNA: ENST00000377017.5

TIMP1-202, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 2 BASIC

Gene TIMP1, Length 626 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-202ENST00000377017 ATG2BQ96BY7 2078 aa13.38□□□□□ -0.27
TIMP1-202ENST00000377017 K7ERQ8 282 aa13.38□□□□□ -0.27
TIMP1-202ENST00000377017 SGK1O00141 431 aa13.38□□□□□ -0.27
TIMP1-202ENST00000377017 RNF103O00237 685 aa13.38□□□□□ -0.27
TIMP1-202ENST00000377017 SMAD6O43541 496 aaKnown RBP13.38□□□□□ -0.27
TIMP1-202ENST00000377017 PEX11BO96011 259 aa13.38□□□□□ -0.27
TIMP1-202ENST00000377017 JCHAINP01591 159 aa13.38□□□□□ -0.27
TIMP1-202ENST00000377017 AOC1P19801 751 aa13.38□□□□□ -0.27
TIMP1-202ENST00000377017 CES1P23141 567 aa13.38□□□□□ -0.27
TIMP1-202ENST00000377017 PRKCHP24723 683 aa13.38□□□□□ -0.27
TIMP1-202ENST00000377017 PTPN3P26045 913 aa13.38□□□□□ -0.27
TIMP1-202ENST00000377017 WASP42768 502 aa13.38□□□□□ -0.27
TIMP1-202ENST00000377017 MAPK8P45983 427 aa13.38□□□□□ -0.27
TIMP1-202ENST00000377017 ITKQ08881 620 aa13.38□□□□□ -0.27
TIMP1-202ENST00000377017 NSUN2Q08J23 767 aaKnown RBP eCLIP13.38□□□□□ -0.27
TIMP1-202ENST00000377017 FZD5Q13467 585 aa13.38□□□□□ -0.27
TIMP1-202ENST00000377017 ELAVL3Q14576 367 aaKnown RBP13.38□□□□□ -0.27
TIMP1-202ENST00000377017 GRM3Q14832 879 aa13.38□□□□□ -0.27
TIMP1-202ENST00000377017 CYTH1Q15438 398 aa13.38□□□□□ -0.27
TIMP1-202ENST00000377017 OASLQ15646 514 aaKnown RBP13.38□□□□□ -0.27
TIMP1-202ENST00000377017 TEX44Q53QW1 395 aa13.38□□□□□ -0.27
TIMP1-202ENST00000377017 CARD16Q5EG05 197 aa13.38□□□□□ -0.27
TIMP1-202ENST00000377017 RALGPS1Q5JS13 557 aa13.38□□□□□ -0.27
TIMP1-202ENST00000377017 CWF19L1Q69YN2 538 aaKnown RBP13.38□□□□□ -0.27
TIMP1-202ENST00000377017 ITPRIPL1Q6GPH6 555 aa13.38□□□□□ -0.27
TIMP1-202ENST00000377017 Q6ZS52 159 aa13.38□□□□□ -0.27
TIMP1-202ENST00000377017 Q6ZVU0 165 aa13.38□□□□□ -0.27
TIMP1-202ENST00000377017 B4GALNT4Q76KP1 1039 aa13.38□□□□□ -0.27
TIMP1-202ENST00000377017 GSTA5Q7RTV2 222 aa13.38□□□□□ -0.27
TIMP1-202ENST00000377017 DSG4Q86SJ6 1040 aa13.38□□□□□ -0.27
TIMP1-202ENST00000377017 CCDC89Q8N998 374 aa13.38□□□□□ -0.27
TIMP1-202ENST00000377017 MNS1Q8NEH6 495 aa13.38□□□□□ -0.27
TIMP1-202ENST00000377017 OR2AP1Q8NGE2 309 aa13.38□□□□□ -0.27
TIMP1-202ENST00000377017 ATL2Q8NHH9 583 aa13.38□□□□□ -0.27
TIMP1-202ENST00000377017 FRS2Q8WU20 508 aa13.38□□□□□ -0.27
TIMP1-202ENST00000377017 TMEM121Q9BTD3 319 aa13.38□□□□□ -0.27
TIMP1-202ENST00000377017 TM6SF2Q9BZW4 377 aa13.38□□□□□ -0.27
TIMP1-202ENST00000377017 POLR1EQ9GZS1 481 aaKnown RBP13.38□□□□□ -0.27
TIMP1-202ENST00000377017 NT5MQ9NPB1 228 aa13.38□□□□□ -0.27
TIMP1-202ENST00000377017 ZDHHC4Q9NPG8 344 aa13.38□□□□□ -0.27
TIMP1-202ENST00000377017 HCN2Q9UL51 889 aa13.38□□□□□ -0.27
TIMP1-202ENST00000377017 TTLL3Q9Y4R7 772 aa13.38□□□□□ -0.27
TIMP1-202ENST00000377017 MRFAP1Q9Y605 127 aa13.38□□□□□ -0.27
TIMP1-202ENST00000377017 ACTL7AQ9Y615 435 aa13.38□□□□□ -0.27
TIMP1-202ENST00000377017 TECTAO75443 2155 aa13.38□□□□□ -0.27
TIMP1-202ENST00000377017 CKAP5Q14008 2032 aa13.37□□□□□ -0.27
TIMP1-202ENST00000377017 ALOX15BO15296 676 aa13.37□□□□□ -0.27
TIMP1-202ENST00000377017 BNIP3LO60238 219 aa13.37□□□□□ -0.27
TIMP1-202ENST00000377017 OPHN1O60890 802 aa13.37□□□□□ -0.27
TIMP1-202ENST00000377017 RNASEH1O60930 286 aaKnown RBP13.37□□□□□ -0.27
TIMP1-202ENST00000377017 DCNP07585 359 aaKnown RBP13.37□□□□□ -0.27
TIMP1-202ENST00000377017 CHRM1P11229 460 aaPredicted RBP13.37□□□□□ -0.27
TIMP1-202ENST00000377017 HLA-EP13747 358 aa13.37□□□□□ -0.27
TIMP1-202ENST00000377017 COILP38432 576 aaPredicted RBP13.37□□□□□ -0.27
TIMP1-202ENST00000377017 CSNK1DP48730 415 aa13.37□□□□□ -0.27
TIMP1-202ENST00000377017 DGKEP52429 567 aa13.37□□□□□ -0.27
TIMP1-202ENST00000377017 ZBTB17Q13105 803 aa13.37□□□□□ -0.27
TIMP1-202ENST00000377017 CCDC137Q6PK04 289 aaKnown RBP13.37□□□□□ -0.27
TIMP1-202ENST00000377017 SYT13Q7L8C5 426 aa13.37□□□□□ -0.27
TIMP1-202ENST00000377017 BMP8AQ7Z5Y6 402 aa13.37□□□□□ -0.27
TIMP1-202ENST00000377017 RYBPQ8N488 228 aaPredicted RBP13.37□□□□□ -0.27
TIMP1-202ENST00000377017 SPEM1Q8N4L4 309 aa13.37□□□□□ -0.27
TIMP1-202ENST00000377017 ZNF366Q8N895 744 aa13.37□□□□□ -0.27
TIMP1-202ENST00000377017 FAM71DQ8N9W8 422 aa13.37□□□□□ -0.27
TIMP1-202ENST00000377017 TSEN2Q8NCE0 465 aaKnown RBP13.37□□□□□ -0.27
TIMP1-202ENST00000377017 OR8D1Q8WZ84 308 aa13.37□□□□□ -0.27
TIMP1-202ENST00000377017 PTPRN2Q92932 1015 aa13.37□□□□□ -0.27
TIMP1-202ENST00000377017 PBXIP1Q96AQ6 731 aa13.37□□□□□ -0.27
TIMP1-202ENST00000377017 TEKT5Q96M29 485 aa13.37□□□□□ -0.27
TIMP1-202ENST00000377017 SPATA13Q96N96 652 aa13.37□□□□□ -0.27
TIMP1-202ENST00000377017 AGAP3Q96P47 875 aa13.37□□□□□ -0.27
TIMP1-202ENST00000377017 PPP1R2P1Q96PQ5 205 aa13.37□□□□□ -0.27
TIMP1-202ENST00000377017 MGME1Q9BQP7 344 aa13.37□□□□□ -0.27
TIMP1-202ENST00000377017 TNKS2Q9H2K2 1166 aa13.37□□□□□ -0.27
TIMP1-202ENST00000377017 POLMQ9NP87 494 aaPredicted RBP13.37□□□□□ -0.27
TIMP1-202ENST00000377017 LHX3Q9UBR4 397 aa13.37□□□□□ -0.27
TIMP1-202ENST00000377017 C5orf60A6NFR6 353 aa13.36□□□□□ -0.27
TIMP1-202ENST00000377017 WASH3PC4AMC7 463 aa13.36□□□□□ -0.27
TIMP1-202ENST00000377017 PDE2AO00408 941 aaPredicted RBP13.36□□□□□ -0.27
TIMP1-202ENST00000377017 ADAM23O75077 832 aa13.36□□□□□ -0.27
TIMP1-202ENST00000377017 SIN3BO75182 1162 aa13.36□□□□□ -0.27
TIMP1-202ENST00000377017 ALDH1A2O94788 518 aa13.36□□□□□ -0.27
TIMP1-202ENST00000377017 POP4O95707 220 aaKnown RBP13.36□□□□□ -0.27
TIMP1-202ENST00000377017 GAS8O95995 478 aa13.36□□□□□ -0.27
TIMP1-202ENST00000377017 PDGFBP01127 241 aaPredicted RBP13.36□□□□□ -0.27
TIMP1-202ENST00000377017 IFNB1P01574 187 aa13.36□□□□□ -0.27
TIMP1-202ENST00000377017 HLA-DQB2P05538 268 aa13.36□□□□□ -0.27
TIMP1-202ENST00000377017 CA4P22748 312 aa13.36□□□□□ -0.27
TIMP1-202ENST00000377017 SCNN1BP51168 640 aa13.36□□□□□ -0.27
TIMP1-202ENST00000377017 CCNHP51946 323 aaPredicted RBP13.36□□□□□ -0.27
TIMP1-202ENST00000377017 AP1S1P61966 158 aa13.36□□□□□ -0.27
TIMP1-202ENST00000377017 WASHC5Q12768 1159 aa13.36□□□□□ -0.27
TIMP1-202ENST00000377017 CAMK2GQ13555 558 aaPredicted RBP13.36□□□□□ -0.27
TIMP1-202ENST00000377017 P3H1Q32P28 736 aa13.36□□□□□ -0.27
TIMP1-202ENST00000377017 C4orf22Q6V702 233 aa13.36□□□□□ -0.27
TIMP1-202ENST00000377017 ARHGEF18Q6ZSZ5 1173 aa13.36□□□□□ -0.27
TIMP1-202ENST00000377017 PID1Q7Z2X4 250 aa13.36□□□□□ -0.27
TIMP1-202ENST00000377017 ZNF572Q7Z3I7 529 aaPredicted RBP13.36□□□□□ -0.27
TIMP1-202ENST00000377017 ZNF567Q8N184 647 aa13.36□□□□□ -0.27
TIMP1-202ENST00000377017 SPATA4Q8NEY3 305 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms