RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 UXTQ9UBK9 157 aaPredicted RBP12.79□□□□□ -0.36
CLCN6-206ENST00000376496 CCL26Q9Y258 94 aa12.79□□□□□ -0.36
CLCN6-206ENST00000376496 ERI2A8K979 691 aaKnown RBP12.78□□□□□ -0.36
CLCN6-206ENST00000376496 GREM1O60565 184 aa12.78□□□□□ -0.36
CLCN6-206ENST00000376496 PRAMEF11O60813 436 aa12.78□□□□□ -0.36
CLCN6-206ENST00000376496 ALDH1A2O94788 518 aa12.78□□□□□ -0.36
CLCN6-206ENST00000376496 RHOCP08134 193 aa12.78□□□□□ -0.36
CLCN6-206ENST00000376496 PIRTP0C851 137 aa12.78□□□□□ -0.36
CLCN6-206ENST00000376496 MZF1P28698 734 aaPredicted RBP12.78□□□□□ -0.36
CLCN6-206ENST00000376496 ADRA1AP35348 466 aa12.78□□□□□ -0.36
CLCN6-206ENST00000376496 MAPKAPK2P49137 400 aa12.78□□□□□ -0.36
CLCN6-206ENST00000376496 RABGAP1LQ5R372 815 aa12.78□□□□□ -0.36
CLCN6-206ENST00000376496 LVRNQ6Q4G3 990 aa12.78□□□□□ -0.36
CLCN6-206ENST00000376496 KDELC1Q6UW63 502 aa12.78□□□□□ -0.36
CLCN6-206ENST00000376496 TPGS1Q6ZTW0 290 aa12.78□□□□□ -0.36
CLCN6-206ENST00000376496 FAM47EQ6ZV65 393 aa12.78□□□□□ -0.36
CLCN6-206ENST00000376496 CENPTQ96BT3 561 aa12.78□□□□□ -0.36
CLCN6-206ENST00000376496 IMP4Q96G21 291 aaKnown RBP12.78□□□□□ -0.36
CLCN6-206ENST00000376496 SMIM14Q96QK8 99 aa12.78□□□□□ -0.36
CLCN6-206ENST00000376496 ATP13A1Q9HD20 1204 aa12.78□□□□□ -0.36
CLCN6-206ENST00000376496 C20orf96Q9NUD7 363 aaPredicted RBP12.78□□□□□ -0.36
CLCN6-206ENST00000376496 FGFR1OP2Q9NVK5 253 aa12.78□□□□□ -0.36
CLCN6-206ENST00000376496 CLEC4EQ9ULY5 219 aa12.78□□□□□ -0.36
CLCN6-206ENST00000376496 ACTL7BQ9Y614 415 aa12.78□□□□□ -0.36
CLCN6-206ENST00000376496 MYO9BQ13459 2157 aa12.78□□□□□ -0.36
CLCN6-206ENST00000376496 REV3LO60673 3130 aa12.78□□□□□ -0.36
CLCN6-206ENST00000376496 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.78□□□□□ -0.36
CLCN6-206ENST00000376496 FAM107AO95990 144 aa12.78□□□□□ -0.36
CLCN6-206ENST00000376496 CA3P07451 260 aa12.78□□□□□ -0.36
CLCN6-206ENST00000376496 GEMP55040 296 aa12.78□□□□□ -0.36
CLCN6-206ENST00000376496 CDH4P55283 916 aa12.78□□□□□ -0.36
CLCN6-206ENST00000376496 IL10RBQ08334 325 aa12.78□□□□□ -0.36
CLCN6-206ENST00000376496 ZNF177Q13360 481 aaPredicted RBP12.78□□□□□ -0.36
CLCN6-206ENST00000376496 RASA2Q15283 850 aa12.78□□□□□ -0.36
CLCN6-206ENST00000376496 BBS7Q8IWZ6 715 aa12.78□□□□□ -0.36
CLCN6-206ENST00000376496 BANPQ8N9N5 519 aa12.78□□□□□ -0.36
CLCN6-206ENST00000376496 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.78□□□□□ -0.36
CLCN6-206ENST00000376496 ST13P5Q8NFI4 369 aaPredicted RBP12.78□□□□□ -0.36
CLCN6-206ENST00000376496 ARRDC2Q8TBH0 407 aa12.78□□□□□ -0.36
CLCN6-206ENST00000376496 SP7Q8TDD2 431 aaPredicted RBP12.78□□□□□ -0.36
CLCN6-206ENST00000376496 MRPS31Q92665 395 aaKnown RBP12.78□□□□□ -0.36
CLCN6-206ENST00000376496 SLC46A2Q9BY10 475 aa12.78□□□□□ -0.36
CLCN6-206ENST00000376496 MUC3BQ9H195 1237 aa12.78□□□□□ -0.36
CLCN6-206ENST00000376496 SLC25A51Q9H1U9 297 aa12.78□□□□□ -0.36
CLCN6-206ENST00000376496 PCMTD2Q9NV79 361 aa12.78□□□□□ -0.36
CLCN6-206ENST00000376496 ZFATQ9P243 1243 aa12.78□□□□□ -0.36
CLCN6-206ENST00000376496 MYOFQ9NZM1 2061 aa12.78□□□□□ -0.36
CLCN6-206ENST00000376496 BUD23O43709 281 aaKnown RBP12.78□□□□□ -0.36
CLCN6-206ENST00000376496 RFPL1O75677 317 aa12.78□□□□□ -0.36
CLCN6-206ENST00000376496 SNRPAP09012 282 aaKnown RBP12.78□□□□□ -0.36
CLCN6-206ENST00000376496 GBP2P32456 591 aaPredicted RBP12.78□□□□□ -0.36
CLCN6-206ENST00000376496 ZNF235Q14590 738 aa12.78□□□□□ -0.36
CLCN6-206ENST00000376496 C5orf22Q49AR2 442 aa12.78□□□□□ -0.36
CLCN6-206ENST00000376496 PPM1LQ5SGD2 360 aa12.78□□□□□ -0.36
CLCN6-206ENST00000376496 CXorf57Q6NSI4 855 aaKnown RBP12.78□□□□□ -0.36
CLCN6-206ENST00000376496 ESRP1Q6NXG1 681 aaKnown RBP12.78□□□□□ -0.36
CLCN6-206ENST00000376496 PACS1Q6VY07 963 aa12.78□□□□□ -0.36
CLCN6-206ENST00000376496 SH2D5Q6ZV89 423 aa12.78□□□□□ -0.36
CLCN6-206ENST00000376496 TMEM135Q86UB9 458 aa12.78□□□□□ -0.36
CLCN6-206ENST00000376496 ACVR1CQ8NER5 493 aa12.78□□□□□ -0.36
CLCN6-206ENST00000376496 RIN3Q8TB24 985 aa12.78□□□□□ -0.36
CLCN6-206ENST00000376496 NSMCE1Q8WV22 266 aa12.78□□□□□ -0.36
CLCN6-206ENST00000376496 PPCSQ9HAB8 311 aa12.78□□□□□ -0.36
CLCN6-206ENST00000376496 PDFQ9HBH1 243 aa12.78□□□□□ -0.36
CLCN6-206ENST00000376496 TLR9Q9NR96 1032 aa12.78□□□□□ -0.36
CLCN6-206ENST00000376496 IARS2Q9NSE4 1012 aaKnown RBP12.78□□□□□ -0.36
CLCN6-206ENST00000376496 MIA3Q5JRA6 1907 aa12.78□□□□□ -0.36
CLCN6-206ENST00000376496 A6NNZ2 444 aa12.77□□□□□ -0.36
CLCN6-206ENST00000376496 LPXNO60711 386 aa12.77□□□□□ -0.36
CLCN6-206ENST00000376496 ASMTLO95671 621 aa12.77□□□□□ -0.36
CLCN6-206ENST00000376496 C1RP00736 705 aa12.77□□□□□ -0.36
CLCN6-206ENST00000376496 GSTA2P09210 222 aa12.77□□□□□ -0.36
CLCN6-206ENST00000376496 BMP1P13497 986 aa12.77□□□□□ -0.36
CLCN6-206ENST00000376496 IRX4P78413 519 aa12.77□□□□□ -0.36
CLCN6-206ENST00000376496 MGAT5Q09328 741 aa12.77□□□□□ -0.36
CLCN6-206ENST00000376496 TUBB8Q3ZCM7 444 aa12.77□□□□□ -0.36
CLCN6-206ENST00000376496 RANBP10Q6VN20 620 aa12.77□□□□□ -0.36
CLCN6-206ENST00000376496 LRRC49Q8IUZ0 686 aa12.77□□□□□ -0.36
CLCN6-206ENST00000376496 CKAP2Q8WWK9 683 aa12.77□□□□□ -0.36
CLCN6-206ENST00000376496 FAM111AQ96PZ2 611 aa12.77□□□□□ -0.36
CLCN6-206ENST00000376496 TGS1Q96RS0 853 aaKnown RBP12.77□□□□□ -0.36
CLCN6-206ENST00000376496 EMILIN2Q9BXX0 1053 aa12.77□□□□□ -0.36
CLCN6-206ENST00000376496 IL22Q9GZX6 179 aa12.77□□□□□ -0.36
CLCN6-206ENST00000376496 MAN1C1Q9NR34 630 aa12.77□□□□□ -0.36
CLCN6-206ENST00000376496 H0Y626 953 aa12.77□□□□□ -0.37
CLCN6-206ENST00000376496 PRPF4O43172 522 aaKnown RBP eCLIP12.77□□□□□ -0.37
CLCN6-206ENST00000376496 KRT37O76014 449 aa12.77□□□□□ -0.37
CLCN6-206ENST00000376496 NPY2RP49146 381 aa12.77□□□□□ -0.37
CLCN6-206ENST00000376496 CLCN4P51793 760 aa12.77□□□□□ -0.37
CLCN6-206ENST00000376496 OXCT1P55809 520 aa12.77□□□□□ -0.37
CLCN6-206ENST00000376496 YBEYP58557 167 aaPredicted RBP12.77□□□□□ -0.37
CLCN6-206ENST00000376496 GALNT3Q14435 633 aa12.77□□□□□ -0.37
CLCN6-206ENST00000376496 PTPRCAPQ14761 206 aa12.77□□□□□ -0.37
CLCN6-206ENST00000376496 PPM1JQ5JR12 505 aa12.77□□□□□ -0.37
CLCN6-206ENST00000376496 SPANXN3Q5MJ09 141 aa12.77□□□□□ -0.37
CLCN6-206ENST00000376496 TTC17Q96AE7 1141 aa12.77□□□□□ -0.37
CLCN6-206ENST00000376496 ELAC2Q9BQ52 826 aaKnown RBP12.77□□□□□ -0.37
CLCN6-206ENST00000376496 SOX13Q9UN79 622 aa12.77□□□□□ -0.37
CLCN6-206ENST00000376496 KCTD3Q9Y597 815 aa12.77□□□□□ -0.37
CLCN6-206ENST00000376496 HCFC2Q9Y5Z7 792 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms