RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 EXOC7Q9UPT5 735 aa5.07□□□□□ -1.6
USP48-202ENST00000374730 COX11Q9Y6N1 276 aa5.07□□□□□ -1.6
USP48-202ENST00000374730 NFASCO94856 1347 aa5.06□□□□□ -1.6
USP48-202ENST00000374730 EMSYQ7Z589 1322 aa5.06□□□□□ -1.6
USP48-202ENST00000374730 TCRBV7S2A1N4TA0A589 114 aa5.06□□□□□ -1.6
USP48-202ENST00000374730 CDHR4A6H8M9 788 aa5.06□□□□□ -1.6
USP48-202ENST00000374730 ERICH4A6NGS2 130 aa5.06□□□□□ -1.6
USP48-202ENST00000374730 A6NNZ2 444 aa5.06□□□□□ -1.6
USP48-202ENST00000374730 VWA5AO00534 786 aa5.06□□□□□ -1.6
USP48-202ENST00000374730 ATP2A1O14983 1001 aa5.06□□□□□ -1.6
USP48-202ENST00000374730 KIAA0391O15091 583 aaKnown RBP5.06□□□□□ -1.6
USP48-202ENST00000374730 RAD51CO43502 376 aa5.06□□□□□ -1.6
USP48-202ENST00000374730 AKAP10O43572 662 aa5.06□□□□□ -1.6
USP48-202ENST00000374730 CEP104O60308 925 aa5.06□□□□□ -1.6
USP48-202ENST00000374730 SHOX2O60902 331 aaPredicted RBP5.06□□□□□ -1.6
USP48-202ENST00000374730 HSF2BPO75031 334 aa5.06□□□□□ -1.6
USP48-202ENST00000374730 NDUFS2O75306 463 aa5.06□□□□□ -1.6
USP48-202ENST00000374730 STAM2O75886 525 aa5.06□□□□□ -1.6
USP48-202ENST00000374730 CCNE2O96020 404 aa5.06□□□□□ -1.6
USP48-202ENST00000374730 HSPA6P17066 643 aa5.06□□□□□ -1.6
USP48-202ENST00000374730 CAPN2P17655 700 aa5.06□□□□□ -1.6
USP48-202ENST00000374730 TNFAIP3P21580 790 aa5.06□□□□□ -1.6
USP48-202ENST00000374730 SCP2P22307 547 aa5.06□□□□□ -1.6
USP48-202ENST00000374730 CCND2P30279 289 aa5.06□□□□□ -1.6
USP48-202ENST00000374730 GTF2H1P32780 548 aa5.06□□□□□ -1.6
USP48-202ENST00000374730 CARSP49589 748 aaKnown RBP5.06□□□□□ -1.6
USP48-202ENST00000374730 BACE1P56817 501 aa5.06□□□□□ -1.6
USP48-202ENST00000374730 NOMO3P69849 1222 aa5.06□□□□□ -1.6
USP48-202ENST00000374730 PPFIA1Q13136 1202 aa5.06□□□□□ -1.6
USP48-202ENST00000374730 TARDBPQ13148 414 aaKnown RBP eCLIP5.06□□□□□ -1.6
USP48-202ENST00000374730 PIN1Q13526 163 aaPredicted RBP5.06□□□□□ -1.6
USP48-202ENST00000374730 ZSCAN26Q16670 478 aa5.06□□□□□ -1.6
USP48-202ENST00000374730 UGCGQ16739 394 aa5.06□□□□□ -1.6
USP48-202ENST00000374730 TUBB8Q3ZCM7 444 aa5.06□□□□□ -1.6
USP48-202ENST00000374730 NOMO2Q5JPE7 1267 aa5.06□□□□□ -1.6
USP48-202ENST00000374730 C11orf63Q6NUN7 778 aa5.06□□□□□ -1.6
USP48-202ENST00000374730 PGM2L1Q6PCE3 622 aa5.06□□□□□ -1.6
USP48-202ENST00000374730 SYCE2Q6PIF2 218 aa5.06□□□□□ -1.6
USP48-202ENST00000374730 LEKR1Q6ZMV7 388 aa5.06□□□□□ -1.6
USP48-202ENST00000374730 HAUS6Q7Z4H7 955 aa5.06□□□□□ -1.6
USP48-202ENST00000374730 APOBEC3FQ8IUX4 373 aaKnown RBP5.06□□□□□ -1.6
USP48-202ENST00000374730 CD302Q8IX05 232 aa5.06□□□□□ -1.6
USP48-202ENST00000374730 TCEAL8Q8IYN2 117 aa5.06□□□□□ -1.6
USP48-202ENST00000374730 CHPFQ8IZ52 775 aa5.06□□□□□ -1.6
USP48-202ENST00000374730 SCYL3Q8IZE3 742 aa5.06□□□□□ -1.6
USP48-202ENST00000374730 IQCKQ8N0W5 287 aa5.06□□□□□ -1.6
USP48-202ENST00000374730 CPXCR1Q8N123 301 aa5.06□□□□□ -1.6
USP48-202ENST00000374730 LNX2Q8N448 690 aa5.06□□□□□ -1.6
USP48-202ENST00000374730 DCBLD1Q8N8Z6 715 aa5.06□□□□□ -1.6
USP48-202ENST00000374730 SIMC1Q8NDZ2 872 aa5.06□□□□□ -1.6
USP48-202ENST00000374730 TMEM161BQ8NDZ6 487 aa5.06□□□□□ -1.6
USP48-202ENST00000374730 FAM76AQ8TAV0 307 aa5.06□□□□□ -1.6
USP48-202ENST00000374730 JADE3Q92613 823 aa5.06□□□□□ -1.6
USP48-202ENST00000374730 KIFAP3Q92845 792 aa5.06□□□□□ -1.6
USP48-202ENST00000374730 HDAC10Q969S8 669 aa5.06□□□□□ -1.6
USP48-202ENST00000374730 MARS2Q96GW9 593 aaKnown RBP5.06□□□□□ -1.6
USP48-202ENST00000374730 CDHR1Q96JP9 859 aa5.06□□□□□ -1.6
USP48-202ENST00000374730 TAAR1Q96RJ0 339 aa5.06□□□□□ -1.6
USP48-202ENST00000374730 RMDN3Q96TC7 470 aa5.06□□□□□ -1.6
USP48-202ENST00000374730 KRT12Q99456 494 aa5.06□□□□□ -1.6
USP48-202ENST00000374730 AGPAT1Q99943 283 aa5.06□□□□□ -1.6
USP48-202ENST00000374730 CBWD1Q9BRT8 395 aa5.06□□□□□ -1.6
USP48-202ENST00000374730 MOV10L1Q9BXT6 1211 aaKnown RBP5.06□□□□□ -1.6
USP48-202ENST00000374730 ISCUQ9H1K1 167 aa5.06□□□□□ -1.6
USP48-202ENST00000374730 TAF1DQ9H5J8 278 aaPredicted RBP5.06□□□□□ -1.6
USP48-202ENST00000374730 RPAP3Q9H6T3 665 aaPredicted RBP5.06□□□□□ -1.6
USP48-202ENST00000374730 EPB41L5Q9HCM4 733 aa5.06□□□□□ -1.6
USP48-202ENST00000374730 RNF146Q9NTX7 359 aa5.06□□□□□ -1.6
USP48-202ENST00000374730 MKS1Q9NXB0 559 aa5.06□□□□□ -1.6
USP48-202ENST00000374730 CWC15Q9P013 229 aaKnown RBP5.06□□□□□ -1.6
USP48-202ENST00000374730 BCCIPQ9P287 314 aaKnown RBP eCLIP5.06□□□□□ -1.6
USP48-202ENST00000374730 ADAMTS5Q9UNA0 930 aa5.06□□□□□ -1.6
USP48-202ENST00000374730 PACSIN2Q9UNF0 486 aaPredicted RBP5.06□□□□□ -1.6
USP48-202ENST00000374730 MTO1Q9Y2Z2 717 aaKnown RBP5.06□□□□□ -1.6
USP48-202ENST00000374730 COQ4Q9Y3A0 265 aa5.06□□□□□ -1.6
USP48-202ENST00000374730 PCDHA10Q9Y5I2 948 aa5.06□□□□□ -1.6
USP48-202ENST00000374730 SBF1O95248 1867 aa5.05□□□□□ -1.6
USP48-202ENST00000374730 IGSF9BQ9UPX0 1349 aa5.05□□□□□ -1.6
USP48-202ENST00000374730 ZSWIM8A7E2V4 1837 aa5.05□□□□□ -1.6
USP48-202ENST00000374730 GOLGA6CA6NDK9 693 aa5.05□□□□□ -1.6
USP48-202ENST00000374730 TMCO5BA8MYB1 307 aa5.05□□□□□ -1.6
USP48-202ENST00000374730 MIF4GDA9UHW6 222 aaKnown RBP5.05□□□□□ -1.6
USP48-202ENST00000374730 TISP43B9A030 160 aa5.05□□□□□ -1.6
USP48-202ENST00000374730 C19orf81C9J6K1 198 aa5.05□□□□□ -1.6
USP48-202ENST00000374730 H0YCG3 227 aa5.05□□□□□ -1.6
USP48-202ENST00000374730 FOXN3O00409 490 aaPredicted RBP5.05□□□□□ -1.6
USP48-202ENST00000374730 IFRD1O00458 451 aaPredicted RBP5.05□□□□□ -1.6
USP48-202ENST00000374730 ATP9AO75110 1047 aa5.05□□□□□ -1.6
USP48-202ENST00000374730 RFPL1O75677 317 aa5.05□□□□□ -1.6
USP48-202ENST00000374730 STBD1O95210 358 aa5.05□□□□□ -1.6
USP48-202ENST00000374730 GGPS1O95749 300 aa5.05□□□□□ -1.6
USP48-202ENST00000374730 ADRB2P07550 413 aa5.05□□□□□ -1.6
USP48-202ENST00000374730 GOLGA6DP0CG33 693 aa5.05□□□□□ -1.6
USP48-202ENST00000374730 MTHFD1P11586 935 aaKnown RBP5.05□□□□□ -1.6
USP48-202ENST00000374730 MYCLP12524 364 aaPredicted RBP5.05□□□□□ -1.6
USP48-202ENST00000374730 GZMAP12544 262 aa5.05□□□□□ -1.6
USP48-202ENST00000374730 KCNA2P16389 499 aa5.05□□□□□ -1.6
USP48-202ENST00000374730 C5AR1P21730 350 aa5.05□□□□□ -1.6
USP48-202ENST00000374730 HSPA9P38646 679 aaKnown RBP5.05□□□□□ -1.6
USP48-202ENST00000374730 GMPSP49915 693 aaPredicted RBP5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms