RNA–Protein interactions for RNA: ENST00000372242.7

TMEM53-203, Transcript of transmembrane protein 53, humanhuman

TSL 3 BASIC

Gene TMEM53, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-203ENST00000372242 METTL3Q86U44 580 aaKnown RBP16.59■□□□□ 0.25
TMEM53-203ENST00000372242 ZSCAN30Q86W11 494 aa16.59■□□□□ 0.25
TMEM53-203ENST00000372242 PGBD5Q8N414 524 aa16.59■□□□□ 0.25
TMEM53-203ENST00000372242 TTC13Q8NBP0 860 aa16.59■□□□□ 0.25
TMEM53-203ENST00000372242 CHST14Q8NCH0 376 aa16.59■□□□□ 0.25
TMEM53-203ENST00000372242 TSTD1Q8NFU3 115 aa16.59■□□□□ 0.25
TMEM53-203ENST00000372242 NSMCE1Q8WV22 266 aa16.59■□□□□ 0.25
TMEM53-203ENST00000372242 HMGB4Q8WW32 186 aa16.59■□□□□ 0.25
TMEM53-203ENST00000372242 C1orf54Q8WWF1 131 aa16.59■□□□□ 0.25
TMEM53-203ENST00000372242 ISG20Q96AZ6 181 aaKnown RBP16.59■□□□□ 0.25
TMEM53-203ENST00000372242 FAM129BQ96TA1 746 aa16.59■□□□□ 0.25
TMEM53-203ENST00000372242 POLMQ9NP87 494 aaPredicted RBP16.59■□□□□ 0.25
TMEM53-203ENST00000372242 TTC24A2A3L6 582 aaPredicted RBP16.59■□□□□ 0.25
TMEM53-203ENST00000372242 ESPNB1AK53 854 aa16.59■□□□□ 0.25
TMEM53-203ENST00000372242 K7ESF4 209 aa16.59■□□□□ 0.25
TMEM53-203ENST00000372242 JCHAINP01591 159 aa16.59■□□□□ 0.25
TMEM53-203ENST00000372242 TCP1P17987 556 aaKnown RBP16.59■□□□□ 0.25
TMEM53-203ENST00000372242 GKP32189 559 aa16.59■□□□□ 0.25
TMEM53-203ENST00000372242 MMP13P45452 471 aa16.59■□□□□ 0.25
TMEM53-203ENST00000372242 RENBPP51606 427 aa16.59■□□□□ 0.25
TMEM53-203ENST00000372242 MAXP61244 160 aa16.59■□□□□ 0.25
TMEM53-203ENST00000372242 ZBTB17Q13105 803 aa16.59■□□□□ 0.25
TMEM53-203ENST00000372242 HNRNPDQ14103 355 aaKnown RBP16.59■□□□□ 0.25
TMEM53-203ENST00000372242 ZNF235Q14590 738 aa16.59■□□□□ 0.25
TMEM53-203ENST00000372242 RFTN1Q14699 578 aaPredicted RBP16.59■□□□□ 0.25
TMEM53-203ENST00000372242 CARD16Q5EG05 197 aa16.59■□□□□ 0.25
TMEM53-203ENST00000372242 MAML2Q8IZL2 1156 aaPredicted RBP16.59■□□□□ 0.25
TMEM53-203ENST00000372242 RASGEF1CQ8N431 466 aa16.59■□□□□ 0.25
TMEM53-203ENST00000372242 RYBPQ8N488 228 aaPredicted RBP16.59■□□□□ 0.25
TMEM53-203ENST00000372242 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.59■□□□□ 0.25
TMEM53-203ENST00000372242 OR2AP1Q8NGE2 309 aa16.59■□□□□ 0.25
TMEM53-203ENST00000372242 MAML1Q92585 1016 aa16.59■□□□□ 0.25
TMEM53-203ENST00000372242 QKIQ96PU8 341 aaKnown RBP eCLIP16.59■□□□□ 0.25
TMEM53-203ENST00000372242 BRD8Q9H0E9 1235 aa16.59■□□□□ 0.25
TMEM53-203ENST00000372242 NT5MQ9NPB1 228 aa16.59■□□□□ 0.25
TMEM53-203ENST00000372242 SEPT3Q9UH03 358 aa16.59■□□□□ 0.25
TMEM53-203ENST00000372242 SAR1BQ9Y6B6 198 aa16.59■□□□□ 0.25
TMEM53-203ENST00000372242 MCF2LO15068 1137 aa16.58■□□□□ 0.24
TMEM53-203ENST00000372242 GABRG2P18507 467 aa16.58■□□□□ 0.24
TMEM53-203ENST00000372242 NDUFV2P19404 249 aa16.58■□□□□ 0.24
TMEM53-203ENST00000372242 RBL1P28749 1068 aa16.58■□□□□ 0.24
TMEM53-203ENST00000372242 RECQLP46063 649 aaPredicted RBP16.58■□□□□ 0.24
TMEM53-203ENST00000372242 CCNHP51946 323 aaPredicted RBP16.58■□□□□ 0.24
TMEM53-203ENST00000372242 XRCC4Q13426 336 aa16.58■□□□□ 0.24
TMEM53-203ENST00000372242 ELAVL3Q14576 367 aaKnown RBP16.58■□□□□ 0.24
TMEM53-203ENST00000372242 SLC45A4Q5BKX6 768 aa16.58■□□□□ 0.24
TMEM53-203ENST00000372242 DARS2Q6PI48 645 aaKnown RBP16.58■□□□□ 0.24
TMEM53-203ENST00000372242 TMPRSS6Q8IU80 811 aa16.58■□□□□ 0.24
TMEM53-203ENST00000372242 MMAAQ8IVH4 418 aaKnown RBP16.58■□□□□ 0.24
TMEM53-203ENST00000372242 TEX26Q8N6G2 289 aa16.58■□□□□ 0.24
TMEM53-203ENST00000372242 MDGA1Q8NFP4 955 aa16.58■□□□□ 0.24
TMEM53-203ENST00000372242 OR2T3Q8NH03 318 aa16.58■□□□□ 0.24
TMEM53-203ENST00000372242 CAPZA3Q96KX2 299 aa16.58■□□□□ 0.24
TMEM53-203ENST00000372242 MRGPRX1Q96LB2 322 aa16.58■□□□□ 0.24
TMEM53-203ENST00000372242 PSKH2Q96QS6 385 aa16.58■□□□□ 0.24
TMEM53-203ENST00000372242 RBM22Q9NW64 420 aaKnown RBP eCLIP16.58■□□□□ 0.24
TMEM53-203ENST00000372242 DNPEPQ9ULA0 475 aa16.58■□□□□ 0.24
TMEM53-203ENST00000372242 TTLL3Q9Y4R7 772 aa16.58■□□□□ 0.24
TMEM53-203ENST00000372242 HACD1B0YJ81 288 aa16.57■□□□□ 0.24
TMEM53-203ENST00000372242 RNF103O00237 685 aa16.57■□□□□ 0.24
TMEM53-203ENST00000372242 CTSLP07711 333 aa16.57■□□□□ 0.24
TMEM53-203ENST00000372242 PRLRP16471 622 aa16.57■□□□□ 0.24
TMEM53-203ENST00000372242 NRLP54845 237 aa16.57■□□□□ 0.24
TMEM53-203ENST00000372242 SNRPD1P62314 119 aaKnown RBP16.57■□□□□ 0.24
TMEM53-203ENST00000372242 CSTF1Q05048 431 aaKnown RBP16.57■□□□□ 0.24
TMEM53-203ENST00000372242 ZNF33AQ06730 810 aa16.57■□□□□ 0.24
TMEM53-203ENST00000372242 DMWDQ09019 674 aa16.57■□□□□ 0.24
TMEM53-203ENST00000372242 SNX1Q13596 522 aa16.57■□□□□ 0.24
TMEM53-203ENST00000372242 HEATR6Q6AI08 1181 aaKnown RBP16.57■□□□□ 0.24
TMEM53-203ENST00000372242 PGBD3Q8N328 593 aa16.57■□□□□ 0.24
TMEM53-203ENST00000372242 SLC35B2Q8TB61 432 aa16.57■□□□□ 0.24
TMEM53-203ENST00000372242 GRIN3AQ8TCU5 1115 aa16.57■□□□□ 0.24
TMEM53-203ENST00000372242 OR8D1Q8WZ84 308 aa16.57■□□□□ 0.24
TMEM53-203ENST00000372242 FATE1Q969F0 183 aa16.57■□□□□ 0.24
TMEM53-203ENST00000372242 GDAP1L1Q96MZ0 367 aa16.57■□□□□ 0.24
TMEM53-203ENST00000372242 AP1M1Q9BXS5 423 aa16.57■□□□□ 0.24
TMEM53-203ENST00000372242 ZDHHC6Q9H6R6 413 aa16.57■□□□□ 0.24
TMEM53-203ENST00000372242 PRMT8Q9NR22 394 aaPredicted RBP16.57■□□□□ 0.24
TMEM53-203ENST00000372242 BCCIPQ9P287 314 aaKnown RBP eCLIP16.57■□□□□ 0.24
TMEM53-203ENST00000372242 EVLQ9UI08 416 aaPredicted RBP16.57■□□□□ 0.24
TMEM53-203ENST00000372242 PGRMC1O00264 195 aaKnown RBP16.56■□□□□ 0.24
TMEM53-203ENST00000372242 KRIT1O00522 736 aa16.56■□□□□ 0.24
TMEM53-203ENST00000372242 CES2O00748 559 aa16.56■□□□□ 0.24
TMEM53-203ENST00000372242 INSIG1O15503 277 aa16.56■□□□□ 0.24
TMEM53-203ENST00000372242 NEBLO76041 1014 aa16.56■□□□□ 0.24
TMEM53-203ENST00000372242 APBB3O95704 486 aa16.56■□□□□ 0.24
TMEM53-203ENST00000372242 IGSF6O95976 241 aa16.56■□□□□ 0.24
TMEM53-203ENST00000372242 GSRP00390 522 aa16.56■□□□□ 0.24
TMEM53-203ENST00000372242 HLA-DQB2P05538 268 aa16.56■□□□□ 0.24
TMEM53-203ENST00000372242 SCNN1BP51168 640 aa16.56■□□□□ 0.24
TMEM53-203ENST00000372242 METAP1P53582 386 aa16.56■□□□□ 0.24
TMEM53-203ENST00000372242 IFI35P80217 286 aaPredicted RBP16.56■□□□□ 0.24
TMEM53-203ENST00000372242 ITKQ08881 620 aa16.56■□□□□ 0.24
TMEM53-203ENST00000372242 WASHC5Q12768 1159 aa16.56■□□□□ 0.24
TMEM53-203ENST00000372242 POM121L1PQ3SYA9 428 aa16.56■□□□□ 0.24
TMEM53-203ENST00000372242 CNTD1Q8N815 330 aa16.56■□□□□ 0.24
TMEM53-203ENST00000372242 HTR3CQ8WXA8 447 aa16.56■□□□□ 0.24
TMEM53-203ENST00000372242 ZNF592Q92610 1267 aa16.56■□□□□ 0.24
TMEM53-203ENST00000372242 CCDC114Q96M63 670 aa16.56■□□□□ 0.24
TMEM53-203ENST00000372242 AGAP3Q96P47 875 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms