RNA–Protein interactions for RNA: ENST00000370952.3

LRRC40-201, Transcript of leucine rich repeat containing 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC40, Length 2,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40-201ENST00000370952 AP4E1Q9UPM8 1137 aa9.8□□□□□ -0.84
LRRC40-201ENST00000370952 FADS3Q9Y5Q0 445 aa9.8□□□□□ -0.84
LRRC40-201ENST00000370952 CNTNAP1P78357 1384 aa9.8□□□□□ -0.84
LRRC40-201ENST00000370952 ZFC3H1O60293 1989 aaKnown RBP9.79□□□□□ -0.84
LRRC40-201ENST00000370952 C1orf232A0A0U1RR37 186 aa9.79□□□□□ -0.84
LRRC40-201ENST00000370952 TCRBV3S1A0A5B6 114 aa9.79□□□□□ -0.84
LRRC40-201ENST00000370952 FAM155AB1AL88 458 aaPredicted RBP9.79□□□□□ -0.84
LRRC40-201ENST00000370952 SDHDO14521 159 aa9.79□□□□□ -0.84
LRRC40-201ENST00000370952 SPTLC1O15269 473 aa9.79□□□□□ -0.84
LRRC40-201ENST00000370952 MFSD11O43934 449 aa9.79□□□□□ -0.84
LRRC40-201ENST00000370952 KCNH1O95259 989 aa9.79□□□□□ -0.84
LRRC40-201ENST00000370952 GJB1P08034 283 aa9.79□□□□□ -0.84
LRRC40-201ENST00000370952 HNRNPLP14866 589 aaKnown RBP eCLIP9.79□□□□□ -0.84
LRRC40-201ENST00000370952 ATP6V1B2P21281 511 aa9.79□□□□□ -0.84
LRRC40-201ENST00000370952 NDST1P52848 882 aa9.79□□□□□ -0.84
LRRC40-201ENST00000370952 EN1Q05925 392 aaPredicted RBP9.79□□□□□ -0.84
LRRC40-201ENST00000370952 GRM3Q14832 879 aa9.79□□□□□ -0.84
LRRC40-201ENST00000370952 GALNT18Q6P9A2 607 aa9.79□□□□□ -0.84
LRRC40-201ENST00000370952 KCTD8Q6ZWB6 473 aa9.79□□□□□ -0.84
LRRC40-201ENST00000370952 RPS27LQ71UM5 84 aaKnown RBP9.79□□□□□ -0.84
LRRC40-201ENST00000370952 EPHX4Q8IUS5 362 aa9.79□□□□□ -0.84
LRRC40-201ENST00000370952 RNF149Q8NC42 400 aa9.79□□□□□ -0.84
LRRC40-201ENST00000370952 OR9I1Q8NGQ6 314 aa9.79□□□□□ -0.84
LRRC40-201ENST00000370952 CLEC4CQ8WTT0 213 aa9.79□□□□□ -0.84
LRRC40-201ENST00000370952 KHSRPQ92945 711 aaKnown RBP eCLIP9.79□□□□□ -0.848e-9■■■■■ 32.7
LRRC40-201ENST00000370952 P2RY11Q96G91 374 aa9.79□□□□□ -0.84
LRRC40-201ENST00000370952 PDZD7Q9H5P4 517 aa9.79□□□□□ -0.84
LRRC40-201ENST00000370952 IARS2Q9NSE4 1012 aaKnown RBP9.79□□□□□ -0.84
LRRC40-201ENST00000370952 RUVBL2Q9Y230 463 aaKnown RBP9.79□□□□□ -0.84
LRRC40-201ENST00000370952 RNF103-CHMP3A0A140T963 221 aa9.79□□□□□ -0.84
LRRC40-201ENST00000370952 KCNK1O00180 336 aa9.79□□□□□ -0.84
LRRC40-201ENST00000370952 MDM4O15151 490 aa9.79□□□□□ -0.84
LRRC40-201ENST00000370952 TRIM24O15164 1050 aa9.79□□□□□ -0.84
LRRC40-201ENST00000370952 MPOP05164 745 aa9.79□□□□□ -0.84
LRRC40-201ENST00000370952 PFKMP08237 780 aa9.79□□□□□ -0.84
LRRC40-201ENST00000370952 VDRP11473 427 aa9.79□□□□□ -0.84
LRRC40-201ENST00000370952 SLC7A2P52569 658 aa9.79□□□□□ -0.84
LRRC40-201ENST00000370952 LRP8Q14114 963 aa9.79□□□□□ -0.84
LRRC40-201ENST00000370952 SPIDRQ14159 915 aa9.79□□□□□ -0.84
LRRC40-201ENST00000370952 PPP1R3AQ16821 1122 aa9.79□□□□□ -0.84
LRRC40-201ENST00000370952 GOLGA7BQ2TAP0 167 aa9.79□□□□□ -0.84
LRRC40-201ENST00000370952 ZYG11AQ6WRX3 759 aa9.79□□□□□ -0.84
LRRC40-201ENST00000370952 TMEM151AQ8N4L1 468 aa9.79□□□□□ -0.84
LRRC40-201ENST00000370952 ARL10Q8N8L6 244 aa9.79□□□□□ -0.84
LRRC40-201ENST00000370952 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.79□□□□□ -0.84
LRRC40-201ENST00000370952 CHPT1Q8WUD6 406 aa9.79□□□□□ -0.84
LRRC40-201ENST00000370952 PBXIP1Q96AQ6 731 aa9.79□□□□□ -0.84
LRRC40-201ENST00000370952 VPS39Q96JC1 886 aa9.79□□□□□ -0.84
LRRC40-201ENST00000370952 TCF12Q99081 682 aa9.79□□□□□ -0.84
LRRC40-201ENST00000370952 EFHD1Q9BUP0 239 aa9.79□□□□□ -0.84
LRRC40-201ENST00000370952 IL1RL2Q9HB29 575 aa9.79□□□□□ -0.84
LRRC40-201ENST00000370952 TMPRSS4Q9NRS4 437 aa9.79□□□□□ -0.84
LRRC40-201ENST00000370952 SHROOM3Q8TF72 1996 aa9.79□□□□□ -0.84
LRRC40-201ENST00000370952 TRIM64CA6NLI5 447 aa9.78□□□□□ -0.84
LRRC40-201ENST00000370952 SLC22A2O15244 555 aa9.78□□□□□ -0.84
LRRC40-201ENST00000370952 ASNSP08243 561 aa9.78□□□□□ -0.84
LRRC40-201ENST00000370952 MAP4P27816 1152 aaKnown RBP9.78□□□□□ -0.84
LRRC40-201ENST00000370952 SOX11P35716 441 aa9.78□□□□□ -0.84
LRRC40-201ENST00000370952 CD151P48509 253 aa9.78□□□□□ -0.84
LRRC40-201ENST00000370952 MLLT10P55197 1068 aa9.78□□□□□ -0.84
LRRC40-201ENST00000370952 TNK2Q07912 1038 aa9.78□□□□□ -0.84
LRRC40-201ENST00000370952 MERTKQ12866 999 aa9.78□□□□□ -0.84
LRRC40-201ENST00000370952 GRM1Q13255 1194 aa9.78□□□□□ -0.84
LRRC40-201ENST00000370952 FASTKQ14296 549 aaKnown RBP9.78□□□□□ -0.84
LRRC40-201ENST00000370952 PLCL1Q15111 1095 aa9.78□□□□□ -0.84
LRRC40-201ENST00000370952 MAP7D1Q3KQU3 841 aa9.78□□□□□ -0.84
LRRC40-201ENST00000370952 SPANXN3Q5MJ09 141 aa9.78□□□□□ -0.84
LRRC40-201ENST00000370952 TBCELQ5QJ74 424 aa9.78□□□□□ -0.84
LRRC40-201ENST00000370952 CERCAMQ5T4B2 595 aa9.78□□□□□ -0.84
LRRC40-201ENST00000370952 NIPAL1Q6NVV3 410 aa9.78□□□□□ -0.84
LRRC40-201ENST00000370952 OLFML1Q6UWY5 402 aa9.78□□□□□ -0.84
LRRC40-201ENST00000370952 TTC30AQ86WT1 665 aa9.78□□□□□ -0.84
LRRC40-201ENST00000370952 SIX6OS1Q8N1H7 587 aa9.78□□□□□ -0.84
LRRC40-201ENST00000370952 FSTL5Q8N475 847 aaPredicted RBP9.78□□□□□ -0.84
LRRC40-201ENST00000370952 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.78□□□□□ -0.84
LRRC40-201ENST00000370952 DNAAF3Q8N9W5 541 aa9.78□□□□□ -0.84
LRRC40-201ENST00000370952 KDM1BQ8NB78 822 aa9.78□□□□□ -0.84
LRRC40-201ENST00000370952 ISL2Q96A47 359 aa9.78□□□□□ -0.84
LRRC40-201ENST00000370952 ACDQ96AP0 544 aa9.78□□□□□ -0.84
LRRC40-201ENST00000370952 TBCBQ99426 244 aa9.78□□□□□ -0.84
LRRC40-201ENST00000370952 LPIN3Q9BQK8 851 aa9.78□□□□□ -0.84
LRRC40-201ENST00000370952 SPATA7Q9P0W8 599 aa9.78□□□□□ -0.84
LRRC40-201ENST00000370952 XPR1Q9UBH6 696 aa9.78□□□□□ -0.84
LRRC40-201ENST00000370952 EGFL7Q9UHF1 273 aa9.78□□□□□ -0.84
LRRC40-201ENST00000370952 ADAM28Q9UKQ2 775 aa9.78□□□□□ -0.84
LRRC40-201ENST00000370952 FAM32AQ9Y421 112 aaKnown RBP9.78□□□□□ -0.84
LRRC40-201ENST00000370952 TLL2Q9Y6L7 1015 aa9.78□□□□□ -0.84
LRRC40-201ENST00000370952 ZNF646O15015 1829 aaPredicted RBP9.78□□□□□ -0.84
LRRC40-201ENST00000370952 NEMP2A6NFY4 417 aa9.78□□□□□ -0.84
LRRC40-201ENST00000370952 SOBPA7XYQ1 873 aa9.78□□□□□ -0.84
LRRC40-201ENST00000370952 YDJCA8MPS7 323 aa9.78□□□□□ -0.84
LRRC40-201ENST00000370952 CFAP99D6REC4 459 aa9.78□□□□□ -0.84
LRRC40-201ENST00000370952 ZNF701M0R085 212 aaPredicted RBP9.78□□□□□ -0.84
LRRC40-201ENST00000370952 DLX3O60479 287 aa9.78□□□□□ -0.84
LRRC40-201ENST00000370952 SULT1C4O75897 302 aa9.78□□□□□ -0.84
LRRC40-201ENST00000370952 TPH1P17752 444 aa9.78□□□□□ -0.84
LRRC40-201ENST00000370952 MYF6P23409 242 aa9.78□□□□□ -0.84
LRRC40-201ENST00000370952 DCKP27707 260 aa9.78□□□□□ -0.84
LRRC40-201ENST00000370952 ADSLP30566 484 aaPredicted RBP9.78□□□□□ -0.84
LRRC40-201ENST00000370952 NME5P56597 212 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms