RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.3■□□□□ 0.04
LMO4-201ENST00000370542 EPHB6O15197 1021 aa15.29■□□□□ 0.04
LMO4-201ENST00000370542 IRAK2O43187 625 aa15.29■□□□□ 0.04
LMO4-201ENST00000370542 MSI1O43347 362 aaKnown RBP15.29■□□□□ 0.04
LMO4-201ENST00000370542 NDUFS2O75306 463 aa15.29■□□□□ 0.04
LMO4-201ENST00000370542 LTFP02788 710 aa15.29■□□□□ 0.04
LMO4-201ENST00000370542 CFIP05156 583 aa15.29■□□□□ 0.04
LMO4-201ENST00000370542 SYPP08247 313 aa15.29■□□□□ 0.04
LMO4-201ENST00000370542 CD59P13987 128 aa15.29■□□□□ 0.04
LMO4-201ENST00000370542 BRD2P25440 801 aaKnown RBP15.29■□□□□ 0.04
LMO4-201ENST00000370542 SKIV2L2P42285 1042 aaKnown RBP15.29■□□□□ 0.04
LMO4-201ENST00000370542 MMP13P45452 471 aa15.29■□□□□ 0.04
LMO4-201ENST00000370542 MAPK8P45983 427 aa15.29■□□□□ 0.04
LMO4-201ENST00000370542 RGS7P49802 495 aa15.29■□□□□ 0.04
LMO4-201ENST00000370542 CCNG1P51959 295 aa15.29■□□□□ 0.04
LMO4-201ENST00000370542 SLC14A1Q13336 389 aa15.29■□□□□ 0.04
LMO4-201ENST00000370542 UAP1L1Q3KQV9 507 aa15.29■□□□□ 0.04
LMO4-201ENST00000370542 CMPK2Q5EBM0 449 aa15.29■□□□□ 0.04
LMO4-201ENST00000370542 WDR45BQ5MNZ6 344 aa15.29■□□□□ 0.04
LMO4-201ENST00000370542 NUGGCQ68CJ6 796 aa15.29■□□□□ 0.04
LMO4-201ENST00000370542 HIBCHQ6NVY1 386 aaPredicted RBP15.29■□□□□ 0.04
LMO4-201ENST00000370542 KIAA1324Q6UXG2 1013 aaKnown RBP15.29■□□□□ 0.04
LMO4-201ENST00000370542 TRPM8Q7Z2W7 1104 aa15.29■□□□□ 0.04
LMO4-201ENST00000370542 PEX26Q7Z412 305 aa15.29■□□□□ 0.04
LMO4-201ENST00000370542 DEFB124Q8NES8 71 aa15.29■□□□□ 0.04
LMO4-201ENST00000370542 CLEC4CQ8WTT0 213 aa15.29■□□□□ 0.04
LMO4-201ENST00000370542 SORCS1Q8WY21 1168 aa15.29■□□□□ 0.04
LMO4-201ENST00000370542 SIPA1Q96FS4 1042 aa15.29■□□□□ 0.04
LMO4-201ENST00000370542 FMO2Q99518 471 aa15.29■□□□□ 0.04
LMO4-201ENST00000370542 SH3GL3Q99963 347 aa15.29■□□□□ 0.04
LMO4-201ENST00000370542 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.29■□□□□ 0.04
LMO4-201ENST00000370542 TXLNGYQ9BZA5 131 aa15.29■□□□□ 0.04
LMO4-201ENST00000370542 ROPN1BQ9BZX4 212 aaPredicted RBP15.29■□□□□ 0.04
LMO4-201ENST00000370542 SLC32A1Q9H598 525 aa15.29■□□□□ 0.04
LMO4-201ENST00000370542 ROPN1Q9HAT0 212 aaPredicted RBP15.29■□□□□ 0.04
LMO4-201ENST00000370542 FSCN3Q9NQT6 498 aa15.29■□□□□ 0.04
LMO4-201ENST00000370542 CTNNAL1Q9UBT7 734 aa15.29■□□□□ 0.04
LMO4-201ENST00000370542 BAIAP2L1Q9UHR4 511 aa15.29■□□□□ 0.04
LMO4-201ENST00000370542 KNL1Q8NG31 2342 aa15.29■□□□□ 0.04
LMO4-201ENST00000370542 KALRNO60229 2985 aa15.29■□□□□ 0.04
LMO4-201ENST00000370542 CELSR3Q9NYQ7 3312 aa15.28■□□□□ 0.04
LMO4-201ENST00000370542 METTL12A8MUP2 240 aa15.28■□□□□ 0.04
LMO4-201ENST00000370542 M0QYV0 167 aa15.28■□□□□ 0.04
LMO4-201ENST00000370542 ACSL4O60488 711 aa15.28■□□□□ 0.04
LMO4-201ENST00000370542 SYNCRIPO60506 623 aaKnown RBP15.28■□□□□ 0.04
LMO4-201ENST00000370542 TSPAN3O60637 253 aa15.28■□□□□ 0.04
LMO4-201ENST00000370542 OPHN1O60890 802 aa15.28■□□□□ 0.04
LMO4-201ENST00000370542 ATP5HO75947 161 aa15.28■□□□□ 0.04
LMO4-201ENST00000370542 H2AFZP0C0S5 128 aa15.28■□□□□ 0.04
LMO4-201ENST00000370542 SLC6A4P31645 630 aa15.28■□□□□ 0.04
LMO4-201ENST00000370542 SGSHP51688 502 aa15.28■□□□□ 0.04
LMO4-201ENST00000370542 POLR2FP61218 127 aaKnown RBP15.28■□□□□ 0.04
LMO4-201ENST00000370542 DHX9Q08211 1270 aaKnown RBP15.28■□□□□ 0.04
LMO4-201ENST00000370542 EIF4EBP2Q13542 120 aaPredicted RBP15.28■□□□□ 0.04
LMO4-201ENST00000370542 RAPGEF1Q13905 1077 aa15.28■□□□□ 0.04
LMO4-201ENST00000370542 QPCTQ16769 361 aa15.28■□□□□ 0.04
LMO4-201ENST00000370542 DENND2CQ68D51 928 aa15.28■□□□□ 0.04
LMO4-201ENST00000370542 H2AFVQ71UI9 128 aa15.28■□□□□ 0.04
LMO4-201ENST00000370542 AHI1Q8N157 1196 aa15.28■□□□□ 0.04
LMO4-201ENST00000370542 MINDY1Q8N5J2 469 aa15.28■□□□□ 0.04
LMO4-201ENST00000370542 ZNF557Q8N988 423 aaPredicted RBP15.28■□□□□ 0.04
LMO4-201ENST00000370542 LRRC57Q8N9N7 239 aa15.28■□□□□ 0.04
LMO4-201ENST00000370542 OR2T3Q8NH03 318 aa15.28■□□□□ 0.04
LMO4-201ENST00000370542 PRCCQ92733 491 aaPredicted RBP15.28■□□□□ 0.04
LMO4-201ENST00000370542 TTC17Q96AE7 1141 aa15.28■□□□□ 0.04
LMO4-201ENST00000370542 ERLEC1Q96DZ1 483 aa15.28■□□□□ 0.04
LMO4-201ENST00000370542 FCRL2Q96LA5 508 aaPredicted RBP15.28■□□□□ 0.04
LMO4-201ENST00000370542 ZNF317Q96PQ6 595 aaPredicted RBP15.28■□□□□ 0.04
LMO4-201ENST00000370542 SLC4A5Q9BY07 1137 aa15.28■□□□□ 0.04
LMO4-201ENST00000370542 TRIM7Q9C029 511 aa15.28■□□□□ 0.04
LMO4-201ENST00000370542 ZDHHC5Q9C0B5 715 aa15.28■□□□□ 0.04
LMO4-201ENST00000370542 CIPCQ9C0C6 399 aa15.28■□□□□ 0.04
LMO4-201ENST00000370542 PABPC3Q9H361 631 aaKnown RBP15.28■□□□□ 0.04
LMO4-201ENST00000370542 FBRSQ9HAH7 460 aa15.28■□□□□ 0.04
LMO4-201ENST00000370542 IGSF5Q9NSI5 407 aa15.28■□□□□ 0.04
LMO4-201ENST00000370542 MTRF1LQ9UGC7 380 aaKnown RBP15.28■□□□□ 0.04
LMO4-201ENST00000370542 AMFRQ9UKV5 643 aa15.28■□□□□ 0.04
LMO4-201ENST00000370542 NUMA1Q14980 2115 aa15.28■□□□□ 0.04
LMO4-201ENST00000370542 ZSCAN5CA6NGD5 496 aaPredicted RBP15.27■□□□□ 0.04
LMO4-201ENST00000370542 EIF4E1BA6NMX2 242 aaKnown RBP15.27■□□□□ 0.04
LMO4-201ENST00000370542 CALCAP01258 141 aa15.27■□□□□ 0.04
LMO4-201ENST00000370542 AFPP02771 609 aaKnown RBP15.27■□□□□ 0.04
LMO4-201ENST00000370542 EPHX1P07099 455 aa15.27■□□□□ 0.04
LMO4-201ENST00000370542 MMEP08473 750 aa15.27■□□□□ 0.04
LMO4-201ENST00000370542 DLDP09622 509 aaKnown RBP15.27■□□□□ 0.04
LMO4-201ENST00000370542 PABPC1P11940 636 aaKnown RBP15.27■□□□□ 0.04
LMO4-201ENST00000370542 NQO1P15559 274 aaKnown RBP15.27■□□□□ 0.04
LMO4-201ENST00000370542 GNSP15586 552 aa15.27■□□□□ 0.04
LMO4-201ENST00000370542 SLC11A2P49281 568 aa15.27■□□□□ 0.04
LMO4-201ENST00000370542 SARNPP82979 210 aaKnown RBP15.27■□□□□ 0.04
LMO4-201ENST00000370542 HNRNPDQ14103 355 aaKnown RBP15.27■□□□□ 0.04
LMO4-201ENST00000370542 NADSYN1Q6IA69 706 aa15.27■□□□□ 0.04
LMO4-201ENST00000370542 SERPINA13PQ6UXR4 307 aa15.27■□□□□ 0.04
LMO4-201ENST00000370542 CHST9Q7L1S5 443 aa15.27■□□□□ 0.04
LMO4-201ENST00000370542 TMEM110Q86TL2 294 aa15.27■□□□□ 0.04
LMO4-201ENST00000370542 TPCN2Q8NHX9 752 aa15.27■□□□□ 0.04
LMO4-201ENST00000370542 FIBINQ8TAL6 211 aa15.27■□□□□ 0.04
LMO4-201ENST00000370542 WFDC5Q8TCV5 224 aa15.27■□□□□ 0.04
LMO4-201ENST00000370542 MYO19Q96H55 970 aa15.27■□□□□ 0.04
LMO4-201ENST00000370542 RAB3IPQ96QF0 476 aaPredicted RBP15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms