RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 CXCR5P32302 372 aa7.01□□□□□ -1.29
CSDE1-204ENST00000369530 SCNN1AP37088 669 aa7.01□□□□□ -1.29
CSDE1-204ENST00000369530 PPARGP37231 505 aaPredicted RBP7.01□□□□□ -1.29
CSDE1-204ENST00000369530 VPS41P49754 854 aa7.01□□□□□ -1.29
CSDE1-204ENST00000369530 TAF6P49848 677 aa7.01□□□□□ -1.29
CSDE1-204ENST00000369530 PHKG1Q16816 387 aa7.01□□□□□ -1.29
CSDE1-204ENST00000369530 SV2CQ496J9 727 aa7.01□□□□□ -1.29
CSDE1-204ENST00000369530 METTL21CQ5VZV1 264 aa7.01□□□□□ -1.29
CSDE1-204ENST00000369530 AFMIDQ63HM1 303 aa7.01□□□□□ -1.29
CSDE1-204ENST00000369530 TAOK1Q7L7X3 1001 aa7.01□□□□□ -1.29
CSDE1-204ENST00000369530 ARHGEF19Q8IW93 802 aa7.01□□□□□ -1.29
CSDE1-204ENST00000369530 ARHGAP24Q8N264 748 aa7.01□□□□□ -1.29
CSDE1-204ENST00000369530 OR7G1Q8NGA0 311 aa7.01□□□□□ -1.29
CSDE1-204ENST00000369530 ZSCAN18Q8TBC5 510 aaPredicted RBP7.01□□□□□ -1.29
CSDE1-204ENST00000369530 POMGNT1Q8WZA1 660 aa7.01□□□□□ -1.29
CSDE1-204ENST00000369530 MYEOVQ96EZ4 313 aa7.01□□□□□ -1.29
CSDE1-204ENST00000369530 KRT12Q99456 494 aa7.01□□□□□ -1.29
CSDE1-204ENST00000369530 MIPEPQ99797 713 aa7.01□□□□□ -1.29
CSDE1-204ENST00000369530 TDRD1Q9BXT4 1180 aaKnown RBP7.01□□□□□ -1.29
CSDE1-204ENST00000369530 STK33Q9BYT3 514 aa7.01□□□□□ -1.29
CSDE1-204ENST00000369530 KLC2Q9H0B6 622 aa7.01□□□□□ -1.29
CSDE1-204ENST00000369530 MKS1Q9NXB0 559 aa7.01□□□□□ -1.29
CSDE1-204ENST00000369530 USH1CQ9Y6N9 552 aa7.01□□□□□ -1.29
CSDE1-204ENST00000369530 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.01□□□□□ -1.29
CSDE1-204ENST00000369530 ANKRD34BA5PLL1 514 aa7.01□□□□□ -1.29
CSDE1-204ENST00000369530 DLL1O00548 723 aa7.01□□□□□ -1.29
CSDE1-204ENST00000369530 CHADO15335 359 aa7.01□□□□□ -1.29
CSDE1-204ENST00000369530 DENRO43583 198 aaKnown RBP7.01□□□□□ -1.29
CSDE1-204ENST00000369530 ENTPD5O75356 428 aa7.01□□□□□ -1.29
CSDE1-204ENST00000369530 ZNF821O75541 412 aaPredicted RBP7.01□□□□□ -1.29
CSDE1-204ENST00000369530 MOCS3O95396 460 aa7.01□□□□□ -1.29
CSDE1-204ENST00000369530 INHBBP09529 407 aa7.01□□□□□ -1.29
CSDE1-204ENST00000369530 ETS2P15036 469 aa7.01□□□□□ -1.29
CSDE1-204ENST00000369530 ABCB4P21439 1286 aa7.01□□□□□ -1.29
CSDE1-204ENST00000369530 KCNA5P22460 613 aa7.01□□□□□ -1.29
CSDE1-204ENST00000369530 KRT17Q04695 432 aa7.01□□□□□ -1.29
CSDE1-204ENST00000369530 SEMA3BQ13214 749 aa7.01□□□□□ -1.29
CSDE1-204ENST00000369530 ANKDD1AQ495B1 522 aa7.01□□□□□ -1.29
CSDE1-204ENST00000369530 SLC45A4Q5BKX6 768 aa7.01□□□□□ -1.29
CSDE1-204ENST00000369530 FAM117BQ6P1L5 589 aa7.01□□□□□ -1.29
CSDE1-204ENST00000369530 GJB7Q6PEY0 223 aa7.01□□□□□ -1.29
CSDE1-204ENST00000369530 ELMSAN1Q6PJG2 1045 aa7.01□□□□□ -1.29
CSDE1-204ENST00000369530 LCLAT1Q6UWP7 414 aa7.01□□□□□ -1.29
CSDE1-204ENST00000369530 ZBTB33Q86T24 672 aa7.01□□□□□ -1.29
CSDE1-204ENST00000369530 ITIH5Q86UX2 942 aa7.01□□□□□ -1.29
CSDE1-204ENST00000369530 KLHDC8BQ8IXV7 354 aa7.01□□□□□ -1.29
CSDE1-204ENST00000369530 ATP6V0D2Q8N8Y2 350 aa7.01□□□□□ -1.29
CSDE1-204ENST00000369530 SYN2Q92777 582 aaPredicted RBP7.01□□□□□ -1.29
CSDE1-204ENST00000369530 ZC3H10Q96K80 434 aaKnown RBP7.01□□□□□ -1.29
CSDE1-204ENST00000369530 PRPF18Q99633 342 aaKnown RBP7.01□□□□□ -1.29
CSDE1-204ENST00000369530 MRPS26Q9BYN8 205 aaKnown RBP7.01□□□□□ -1.29
CSDE1-204ENST00000369530 SLC7A5P2Q9GIP4 190 aa7.01□□□□□ -1.29
CSDE1-204ENST00000369530 CLDND1Q9NY35 253 aa7.01□□□□□ -1.29
CSDE1-204ENST00000369530 KLHL14Q9P2G3 628 aa7.01□□□□□ -1.29
CSDE1-204ENST00000369530 ZMYM5Q9UJ78 669 aa7.01□□□□□ -1.29
CSDE1-204ENST00000369530 GTF3C4Q9UKN8 822 aa7.01□□□□□ -1.29
CSDE1-204ENST00000369530 GINS2Q9Y248 185 aa7.01□□□□□ -1.29
CSDE1-204ENST00000369530 SLC38A8A6NNN8 435 aa7□□□□□ -1.29
CSDE1-204ENST00000369530 H7C4K7 107 aa7□□□□□ -1.29
CSDE1-204ENST00000369530 MAGEC1O60732 1142 aa7□□□□□ -1.29
CSDE1-204ENST00000369530 DNAJC6O75061 913 aa7□□□□□ -1.29
CSDE1-204ENST00000369530 FKBP9O95302 570 aa7□□□□□ -1.29
CSDE1-204ENST00000369530 C8AP07357 584 aa7□□□□□ -1.29
CSDE1-204ENST00000369530 PABPC1P11940 636 aaKnown RBP7□□□□□ -1.29
CSDE1-204ENST00000369530 UNGP13051 313 aaPredicted RBP7□□□□□ -1.29
CSDE1-204ENST00000369530 EIF2DP41214 584 aaKnown RBP7□□□□□ -1.29
CSDE1-204ENST00000369530 PPP3CCP48454 512 aa7□□□□□ -1.29
CSDE1-204ENST00000369530 GCLMP48507 274 aa7□□□□□ -1.29
CSDE1-204ENST00000369530 NEK3P51956 506 aa7□□□□□ -1.29
CSDE1-204ENST00000369530 FSTL4Q6MZW2 842 aa7□□□□□ -1.29
CSDE1-204ENST00000369530 MON1AQ86VX9 555 aa7□□□□□ -1.29
CSDE1-204ENST00000369530 DNAAF5Q86Y56 855 aa7□□□□□ -1.29
CSDE1-204ENST00000369530 CCDC110Q8TBZ0 833 aa7□□□□□ -1.29
CSDE1-204ENST00000369530 ZNF641Q96N77 438 aaPredicted RBP7□□□□□ -1.29
CSDE1-204ENST00000369530 NOX5Q96PH1 765 aa7□□□□□ -1.29
CSDE1-204ENST00000369530 RPF1Q9H9Y2 349 aaKnown RBP7□□□□□ -1.29
CSDE1-204ENST00000369530 RASAL2Q9UJF2 1139 aa7□□□□□ -1.29
CSDE1-204ENST00000369530 NOSIPQ9Y314 301 aaKnown RBP7□□□□□ -1.29
CSDE1-204ENST00000369530 ARHGAP10A1A4S6 786 aa7□□□□□ -1.29
CSDE1-204ENST00000369530 PHF2O75151 1096 aa7□□□□□ -1.29
CSDE1-204ENST00000369530 OR4Q2P0C623 313 aa7□□□□□ -1.29
CSDE1-204ENST00000369530 ODC1P11926 461 aa7□□□□□ -1.29
CSDE1-204ENST00000369530 SLC5A2P31639 672 aa7□□□□□ -1.29
CSDE1-204ENST00000369530 OR1D2P34982 312 aa7□□□□□ -1.29
CSDE1-204ENST00000369530 SERPINB6P35237 376 aa7□□□□□ -1.29
CSDE1-204ENST00000369530 LHX1P48742 406 aa7□□□□□ -1.29
CSDE1-204ENST00000369530 MXI1P50539 228 aa7□□□□□ -1.29
CSDE1-204ENST00000369530 NRG1Q02297 640 aaPredicted RBP7□□□□□ -1.29
CSDE1-204ENST00000369530 PRKCQQ04759 706 aa7□□□□□ -1.29
CSDE1-204ENST00000369530 PPP2R5EQ16537 467 aa7□□□□□ -1.29
CSDE1-204ENST00000369530 LARP7Q4G0J3 582 aaKnown RBP eCLIP7□□□□□ -1.29
CSDE1-204ENST00000369530 CCNJQ5T5M9 372 aa7□□□□□ -1.29
CSDE1-204ENST00000369530 AAGABQ6PD74 315 aa7□□□□□ -1.29
CSDE1-204ENST00000369530 DCDC5Q6ZRR9 648 aa7□□□□□ -1.29
CSDE1-204ENST00000369530 SATL1Q86VE3 508 aa7□□□□□ -1.29
CSDE1-204ENST00000369530 THNSL1Q8IYQ7 743 aa7□□□□□ -1.29
CSDE1-204ENST00000369530 PPM1KQ8N3J5 372 aa7□□□□□ -1.29
CSDE1-204ENST00000369530 ABTB1Q969K4 478 aaPredicted RBP7□□□□□ -1.29
CSDE1-204ENST00000369530 KIF12Q96FN5 646 aa7□□□□□ -1.29
CSDE1-204ENST00000369530 LRGUKQ96M69 825 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms