RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 RBM22Q9NW64 420 aaKnown RBP eCLIP14.13□□□□□ -0.15
TPM3-211ENST00000368531 SMARCAL1Q9NZC9 954 aa14.13□□□□□ -0.15
TPM3-211ENST00000368531 LHX3Q9UBR4 397 aa14.13□□□□□ -0.15
TPM3-211ENST00000368531 FARP1Q9Y4F1 1045 aaPredicted RBP14.13□□□□□ -0.15
TPM3-211ENST00000368531 TTLL3Q9Y4R7 772 aa14.13□□□□□ -0.15
TPM3-211ENST00000368531 MCF2LO15068 1137 aa14.12□□□□□ -0.15
TPM3-211ENST00000368531 MUSKO15146 869 aa14.12□□□□□ -0.15
TPM3-211ENST00000368531 MATN3O15232 486 aa14.12□□□□□ -0.15
TPM3-211ENST00000368531 FANCGO15287 622 aa14.12□□□□□ -0.15
TPM3-211ENST00000368531 ALDH1A2O94788 518 aa14.12□□□□□ -0.15
TPM3-211ENST00000368531 APBB3O95704 486 aa14.12□□□□□ -0.15
TPM3-211ENST00000368531 IGSF6O95976 241 aa14.12□□□□□ -0.15
TPM3-211ENST00000368531 JCHAINP01591 159 aa14.12□□□□□ -0.15
TPM3-211ENST00000368531 RBP3P10745 1247 aa14.12□□□□□ -0.15
TPM3-211ENST00000368531 GABRG2P18507 467 aa14.12□□□□□ -0.15
TPM3-211ENST00000368531 GKP32189 559 aa14.12□□□□□ -0.15
TPM3-211ENST00000368531 RGRP47804 291 aa14.12□□□□□ -0.15
TPM3-211ENST00000368531 MAXP61244 160 aa14.12□□□□□ -0.15
TPM3-211ENST00000368531 SNRPD1P62314 119 aaKnown RBP14.12□□□□□ -0.15
TPM3-211ENST00000368531 DMWDQ09019 674 aa14.12□□□□□ -0.15
TPM3-211ENST00000368531 RFTN1Q14699 578 aaPredicted RBP14.12□□□□□ -0.15
TPM3-211ENST00000368531 DPY19L3Q6ZPD9 716 aa14.12□□□□□ -0.15
TPM3-211ENST00000368531 METTL3Q86U44 580 aaKnown RBP14.12□□□□□ -0.15
TPM3-211ENST00000368531 TMPRSS6Q8IU80 811 aa14.12□□□□□ -0.15
TPM3-211ENST00000368531 MMAAQ8IVH4 418 aaKnown RBP14.12□□□□□ -0.15
TPM3-211ENST00000368531 BBS5Q8N3I7 341 aa14.12□□□□□ -0.15
TPM3-211ENST00000368531 PGBD5Q8N414 524 aa14.12□□□□□ -0.15
TPM3-211ENST00000368531 TTC13Q8NBP0 860 aa14.12□□□□□ -0.15
TPM3-211ENST00000368531 OR2A12Q8NGT7 310 aa14.12□□□□□ -0.15
TPM3-211ENST00000368531 OR2T3Q8NH03 318 aa14.12□□□□□ -0.15
TPM3-211ENST00000368531 GRIN3AQ8TCU5 1115 aa14.12□□□□□ -0.15
TPM3-211ENST00000368531 OR8D1Q8WZ84 308 aa14.12□□□□□ -0.15
TPM3-211ENST00000368531 ZNF592Q92610 1267 aa14.12□□□□□ -0.15
TPM3-211ENST00000368531 ISG20Q96AZ6 181 aaKnown RBP14.12□□□□□ -0.15
TPM3-211ENST00000368531 CAPZA3Q96KX2 299 aa14.12□□□□□ -0.15
TPM3-211ENST00000368531 CCDC114Q96M63 670 aa14.12□□□□□ -0.15
TPM3-211ENST00000368531 ZNF599Q96NL3 588 aa14.12□□□□□ -0.15
TPM3-211ENST00000368531 FAM129BQ96TA1 746 aa14.12□□□□□ -0.15
TPM3-211ENST00000368531 TPSD1Q9BZJ3 242 aa14.12□□□□□ -0.15
TPM3-211ENST00000368531 MKRN2Q9H000 416 aaKnown RBP14.12□□□□□ -0.15
TPM3-211ENST00000368531 ZDHHC6Q9H6R6 413 aa14.12□□□□□ -0.15
TPM3-211ENST00000368531 SEPT3Q9UH03 358 aa14.12□□□□□ -0.15
TPM3-211ENST00000368531 EVLQ9UI08 416 aaPredicted RBP14.12□□□□□ -0.15
TPM3-211ENST00000368531 CACNA1IQ9P0X4 2223 aa14.11□□□□□ -0.15
TPM3-211ENST00000368531 K7ESF4 209 aa14.11□□□□□ -0.15
TPM3-211ENST00000368531 KRIT1O00522 736 aa14.11□□□□□ -0.15
TPM3-211ENST00000368531 INSIG1O15503 277 aa14.11□□□□□ -0.15
TPM3-211ENST00000368531 GJB3O75712 270 aa14.11□□□□□ -0.15
TPM3-211ENST00000368531 TRIOO75962 3097 aa14.11□□□□□ -0.15
TPM3-211ENST00000368531 IL1BP01584 269 aa14.11□□□□□ -0.15
TPM3-211ENST00000368531 TCP1P17987 556 aaKnown RBP14.11□□□□□ -0.15
TPM3-211ENST00000368531 NDUFV2P19404 249 aa14.11□□□□□ -0.15
TPM3-211ENST00000368531 RBL1P28749 1068 aa14.11□□□□□ -0.15
TPM3-211ENST00000368531 CHRNA3P32297 505 aa14.11□□□□□ -0.15
TPM3-211ENST00000368531 PSMD8P48556 350 aa14.11□□□□□ -0.15
TPM3-211ENST00000368531 SCNN1BP51168 640 aa14.11□□□□□ -0.15
TPM3-211ENST00000368531 RENBPP51606 427 aa14.11□□□□□ -0.15
TPM3-211ENST00000368531 CCNHP51946 323 aaPredicted RBP14.11□□□□□ -0.15
TPM3-211ENST00000368531 COPAP53621 1224 aa14.11□□□□□ -0.15
TPM3-211ENST00000368531 ZBTB17Q13105 803 aa14.11□□□□□ -0.15
TPM3-211ENST00000368531 XRCC4Q13426 336 aa14.11□□□□□ -0.15
TPM3-211ENST00000368531 HNRNPDQ14103 355 aaKnown RBP14.11□□□□□ -0.15
TPM3-211ENST00000368531 ELAVL3Q14576 367 aaKnown RBP14.11□□□□□ -0.15
TPM3-211ENST00000368531 PRKD1Q15139 912 aaPredicted RBP14.11□□□□□ -0.15
TPM3-211ENST00000368531 SLC45A4Q5BKX6 768 aa14.11□□□□□ -0.15
TPM3-211ENST00000368531 ARSIQ5FYB1 569 aa14.11□□□□□ -0.15
TPM3-211ENST00000368531 PAPD7Q5XG87 772 aaKnown RBP14.11□□□□□ -0.15
TPM3-211ENST00000368531 NYAP1Q6ZVC0 841 aa14.11□□□□□ -0.15
TPM3-211ENST00000368531 MAML2Q8IZL2 1156 aaPredicted RBP14.11□□□□□ -0.15
TPM3-211ENST00000368531 MDGA1Q8NFP4 955 aa14.11□□□□□ -0.15
TPM3-211ENST00000368531 OR2AP1Q8NGE2 309 aa14.11□□□□□ -0.15
TPM3-211ENST00000368531 MAML1Q92585 1016 aa14.11□□□□□ -0.15
TPM3-211ENST00000368531 MRGPRX1Q96LB2 322 aa14.11□□□□□ -0.15
TPM3-211ENST00000368531 GDAP1L1Q96MZ0 367 aa14.11□□□□□ -0.15
TPM3-211ENST00000368531 AGAP3Q96P47 875 aa14.11□□□□□ -0.15
TPM3-211ENST00000368531 QKIQ96PU8 341 aaKnown RBP eCLIP14.11□□□□□ -0.158e-8■■■■■ 32.5
TPM3-211ENST00000368531 BRD8Q9H0E9 1235 aa14.11□□□□□ -0.15
TPM3-211ENST00000368531 CD248Q9HCU0 757 aa14.11□□□□□ -0.15
TPM3-211ENST00000368531 DNPEPQ9ULA0 475 aa14.11□□□□□ -0.15
TPM3-211ENST00000368531 INVSQ9Y283 1065 aa14.11□□□□□ -0.15
TPM3-211ENST00000368531 SAR1BQ9Y6B6 198 aa14.11□□□□□ -0.15
TPM3-211ENST00000368531 TTC28Q96AY4 2481 aa14.1□□□□□ -0.15
TPM3-211ENST00000368531 CXorf51AA0A1B0GTR3 108 aa14.1□□□□□ -0.15
TPM3-211ENST00000368531 HACD1B0YJ81 288 aa14.1□□□□□ -0.15
TPM3-211ENST00000368531 RNF103O00237 685 aa14.1□□□□□ -0.15
TPM3-211ENST00000368531 KCNN4O15554 427 aa14.1□□□□□ -0.15
TPM3-211ENST00000368531 RNASEH1O60930 286 aaKnown RBP14.1□□□□□ -0.15
TPM3-211ENST00000368531 GSRP00390 522 aa14.1□□□□□ -0.15
TPM3-211ENST00000368531 HLA-DQB2P05538 268 aa14.1□□□□□ -0.15
TPM3-211ENST00000368531 FNTBP49356 437 aa14.1□□□□□ -0.15
TPM3-211ENST00000368531 RPS14P62263 151 aaKnown RBP14.1□□□□□ -0.15
TPM3-211ENST00000368531 ANGPT1Q15389 498 aa14.1□□□□□ -0.15
TPM3-211ENST00000368531 SIX1Q15475 284 aaPredicted RBP14.1□□□□□ -0.15
TPM3-211ENST00000368531 MYLK3Q32MK0 819 aa14.1□□□□□ -0.15
TPM3-211ENST00000368531 ZNF776Q68DI1 518 aaPredicted RBP14.1□□□□□ -0.15
TPM3-211ENST00000368531 MAMSTRQ6ZN01 415 aa14.1□□□□□ -0.15
TPM3-211ENST00000368531 SRLQ86TD4 932 aa14.1□□□□□ -0.15
TPM3-211ENST00000368531 ZSCAN30Q86W11 494 aa14.1□□□□□ -0.15
TPM3-211ENST00000368531 CDKL3Q8IVW4 592 aaPredicted RBP14.1□□□□□ -0.15
TPM3-211ENST00000368531 RASGEF1CQ8N431 466 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms