RNA–Protein interactions for RNA: ENST00000368210.7

PTPRK-204, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRK, Length 5,025 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-204ENST00000368210 DUSP16Q9BY84 665 aa13.44□□□□□ -0.26
PTPRK-204ENST00000368210 POLR1EQ9GZS1 481 aaKnown RBP13.44□□□□□ -0.26
PTPRK-204ENST00000368210 MOV10Q9HCE1 1003 aaKnown RBP13.44□□□□□ -0.26
PTPRK-204ENST00000368210 RPRD1BQ9NQG5 326 aaKnown RBP13.44□□□□□ -0.26
PTPRK-204ENST00000368210 SOX6P35712 828 aa13.43□□□□□ -0.26
PTPRK-204ENST00000368210 SERPINH1P50454 418 aaKnown RBP13.43□□□□□ -0.26
PTPRK-204ENST00000368210 BNC1Q01954 994 aa13.43□□□□□ -0.26
PTPRK-204ENST00000368210 DGUOKQ16854 277 aa13.43□□□□□ -0.26
PTPRK-204ENST00000368210 ZNF284Q2VY69 593 aa13.43□□□□□ -0.26
PTPRK-204ENST00000368210 ZFP1Q6P2D0 407 aa13.43□□□□□ -0.26
PTPRK-204ENST00000368210 RNF19BQ6ZMZ0 732 aa13.43□□□□□ -0.26
PTPRK-204ENST00000368210 PIWIL2Q8TC59 973 aaKnown RBP13.43□□□□□ -0.26
PTPRK-204ENST00000368210 B3GNT5Q9BYG0 378 aa13.43□□□□□ -0.26
PTPRK-204ENST00000368210 WRAP73Q9P2S5 460 aaPredicted RBP13.43□□□□□ -0.26
PTPRK-204ENST00000368210 UBA2Q9UBT2 640 aaPredicted RBP13.43□□□□□ -0.26
PTPRK-204ENST00000368210 LRRC37A3O60309 1634 aa13.43□□□□□ -0.26
PTPRK-204ENST00000368210 PNMA8CA0A1B0GUJ8 204 aa13.43□□□□□ -0.26
PTPRK-204ENST00000368210 FAM95CA0A1B0GW59 222 aa13.43□□□□□ -0.26
PTPRK-204ENST00000368210 BIRC5O15392 142 aa13.43□□□□□ -0.26
PTPRK-204ENST00000368210 ENTPD5O75356 428 aa13.43□□□□□ -0.26
PTPRK-204ENST00000368210 LRCH4O75427 683 aa13.43□□□□□ -0.26
PTPRK-204ENST00000368210 PTGS2P35354 604 aa13.43□□□□□ -0.26
PTPRK-204ENST00000368210 PLK1P53350 603 aa13.43□□□□□ -0.26
PTPRK-204ENST00000368210 FKBP1BP68106 108 aa13.43□□□□□ -0.26
PTPRK-204ENST00000368210 UBE3AQ05086 875 aa13.43□□□□□ -0.26
PTPRK-204ENST00000368210 FBXO39Q8N4B4 442 aa13.43□□□□□ -0.26
PTPRK-204ENST00000368210 TOP6BLQ8N6T0 577 aa13.43□□□□□ -0.26
PTPRK-204ENST00000368210 MYLPFQ96A32 169 aa13.43□□□□□ -0.26
PTPRK-204ENST00000368210 TRIM8Q9BZR9 551 aa13.43□□□□□ -0.26
PTPRK-204ENST00000368210 BCAS3Q9H6U6 928 aa13.43□□□□□ -0.26
PTPRK-204ENST00000368210 PCDHA11Q9Y5I1 949 aa13.43□□□□□ -0.26
PTPRK-204ENST00000368210 CHD2O14647 1828 aaKnown RBP13.43□□□□□ -0.26
PTPRK-204ENST00000368210 SMIM35A0A1B0GVV1 85 aa13.43□□□□□ -0.26
PTPRK-204ENST00000368210 TCRBV9S1A1TA0A576 114 aa13.43□□□□□ -0.26
PTPRK-204ENST00000368210 ATP5BP06576 529 aaKnown RBP13.43□□□□□ -0.26
PTPRK-204ENST00000368210 ITGA2BP08514 1039 aa13.43□□□□□ -0.26
PTPRK-204ENST00000368210 ADSSP30520 456 aa13.43□□□□□ -0.26
PTPRK-204ENST00000368210 ZBTB49Q6ZSB9 765 aa13.43□□□□□ -0.26
PTPRK-204ENST00000368210 BTN2A1Q7KYR7 527 aa13.43□□□□□ -0.26
PTPRK-204ENST00000368210 AKAP14Q86UN6 197 aa13.43□□□□□ -0.26
PTPRK-204ENST00000368210 TRABD2AQ86V40 505 aa13.43□□□□□ -0.26
PTPRK-204ENST00000368210 UROC1Q96N76 676 aa13.43□□□□□ -0.26
PTPRK-204ENST00000368210 APOL4Q9BPW4 351 aa13.43□□□□□ -0.26
PTPRK-204ENST00000368210 TMEM245Q9H330 911 aa13.43□□□□□ -0.26
PTPRK-204ENST00000368210 FAM105AQ9NUU6 356 aa13.43□□□□□ -0.26
PTPRK-204ENST00000368210 GPR25O00155 361 aa13.42□□□□□ -0.26
PTPRK-204ENST00000368210 LGR5O75473 907 aa13.42□□□□□ -0.26
PTPRK-204ENST00000368210 CCNB1P14635 433 aa13.42□□□□□ -0.26
PTPRK-204ENST00000368210 HOXB8P17481 243 aaPredicted RBP13.42□□□□□ -0.26
PTPRK-204ENST00000368210 ATP6V1E1P36543 226 aa13.42□□□□□ -0.26
PTPRK-204ENST00000368210 ANKS6Q68DC2 871 aa13.42□□□□□ -0.26
PTPRK-204ENST00000368210 TSPAN14Q8NG11 270 aa13.42□□□□□ -0.26
PTPRK-204ENST00000368210 CIPCQ9C0C6 399 aa13.42□□□□□ -0.26
PTPRK-204ENST00000368210 TMEM161AQ9NX61 479 aa13.42□□□□□ -0.26
PTPRK-204ENST00000368210 PCDHA2Q9Y5H9 948 aa13.42□□□□□ -0.26
PTPRK-204ENST00000368210 SMIM28A0A1B0GU29 152 aa13.42□□□□□ -0.26
PTPRK-204ENST00000368210 KANSL1LA0AUZ9 987 aa13.42□□□□□ -0.26
PTPRK-204ENST00000368210 EME2A4GXA9 379 aaPredicted RBP13.42□□□□□ -0.26
PTPRK-204ENST00000368210 SOWAHBA6NEL2 793 aa13.42□□□□□ -0.26
PTPRK-204ENST00000368210 TRMUO75648 421 aaKnown RBP13.42□□□□□ -0.26
PTPRK-204ENST00000368210 PIGNO95427 931 aa13.42□□□□□ -0.26
PTPRK-204ENST00000368210 BTG3Q14201 252 aaPredicted RBP13.42□□□□□ -0.26
PTPRK-204ENST00000368210 NR6A1Q15406 480 aa13.42□□□□□ -0.26
PTPRK-204ENST00000368210 FAM110CQ1W6H9 321 aa13.42□□□□□ -0.26
PTPRK-204ENST00000368210 ASTE1Q2TB18 679 aaPredicted RBP13.42□□□□□ -0.26
PTPRK-204ENST00000368210 ATP6AP1LQ52LC2 224 aa13.42□□□□□ -0.26
PTPRK-204ENST00000368210 XYLT1Q86Y38 959 aa13.42□□□□□ -0.26
PTPRK-204ENST00000368210 STX19Q8N4C7 294 aa13.42□□□□□ -0.26
PTPRK-204ENST00000368210 MTERF3Q96E29 417 aa13.42□□□□□ -0.26
PTPRK-204ENST00000368210 ACTR8Q9H981 624 aa13.42□□□□□ -0.26
PTPRK-204ENST00000368210 ZNF556Q9HAH1 456 aa13.42□□□□□ -0.26
PTPRK-204ENST00000368210 MORF4L1Q9UBU8 362 aa13.42□□□□□ -0.26
PTPRK-204ENST00000368210 TUBGCP4Q9UGJ1 667 aa13.42□□□□□ -0.26
PTPRK-204ENST00000368210 COQ4Q9Y3A0 265 aa13.42□□□□□ -0.26
PTPRK-204ENST00000368210 MYL4P12829 197 aa13.42□□□□□ -0.26
PTPRK-204ENST00000368210 CD52P31358 61 aa13.42□□□□□ -0.26
PTPRK-204ENST00000368210 CCR3P51677 355 aa13.42□□□□□ -0.26
PTPRK-204ENST00000368210 NAGLUP54802 743 aa13.42□□□□□ -0.26
PTPRK-204ENST00000368210 DMC1Q14565 340 aa13.42□□□□□ -0.26
PTPRK-204ENST00000368210 NOMO1Q15155 1222 aa13.42□□□□□ -0.26
PTPRK-204ENST00000368210 GLT6D1Q7Z4J2 308 aa13.42□□□□□ -0.26
PTPRK-204ENST00000368210 FAM35AQ86V20 835 aa13.42□□□□□ -0.26
PTPRK-204ENST00000368210 FAM9CQ8IZT9 166 aa13.42□□□□□ -0.26
PTPRK-204ENST00000368210 FAXDC2Q96IV6 333 aa13.42□□□□□ -0.26
PTPRK-204ENST00000368210 C12orf42Q96LP6 360 aa13.42□□□□□ -0.26
PTPRK-204ENST00000368210 SPATA16Q9BXB7 569 aa13.42□□□□□ -0.26
PTPRK-204ENST00000368210 GIT1Q9Y2X7 761 aa13.42□□□□□ -0.26
PTPRK-204ENST00000368210 RBMX2Q9Y388 322 aaKnown RBP13.42□□□□□ -0.26
PTPRK-204ENST00000368210 PCDHB12Q9Y5F1 795 aa13.42□□□□□ -0.26
PTPRK-204ENST00000368210 CYP1A1P04798 512 aaPredicted RBP13.42□□□□□ -0.26
PTPRK-204ENST00000368210 MMP3P08254 477 aa13.42□□□□□ -0.26
PTPRK-204ENST00000368210 ZC3H12BQ5HYM0 836 aaKnown RBP13.42□□□□□ -0.26
PTPRK-204ENST00000368210 PPP1R10Q96QC0 940 aaKnown RBP13.42□□□□□ -0.26
PTPRK-204ENST00000368210 LRRC4CQ9HCJ2 640 aa13.42□□□□□ -0.26
PTPRK-204ENST00000368210 SLCO1B3Q9NPD5 702 aa13.42□□□□□ -0.26
PTPRK-204ENST00000368210 RABL2AQ9UBK7 228 aaPredicted RBP13.42□□□□□ -0.26
PTPRK-204ENST00000368210 PCDHGC3Q9UN70 934 aa13.42□□□□□ -0.26
PTPRK-204ENST00000368210 AVILO75366 819 aa13.41□□□□□ -0.26
PTPRK-204ENST00000368210 ZNF7P17097 686 aaPredicted RBP13.41□□□□□ -0.26
PTPRK-204ENST00000368210 CHRNB2P17787 502 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms