RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 PHF12Q96QT6 1004 aa19.33■□□□□ 0.68
CMTM3-201ENST00000361909 ASB7Q9H672 318 aa19.33■□□□□ 0.68
CMTM3-201ENST00000361909 GTF2IRD1Q9UHL9 959 aa19.33■□□□□ 0.68
CMTM3-201ENST00000361909 THSD7BQ9C0I4 1608 aa19.32■□□□□ 0.68
CMTM3-201ENST00000361909 C7orf72A4D263 438 aa19.32■□□□□ 0.68
CMTM3-201ENST00000361909 XPO1O14980 1071 aaKnown RBP19.32■□□□□ 0.68
CMTM3-201ENST00000361909 ALDH2P05091 517 aa19.32■□□□□ 0.68
CMTM3-201ENST00000361909 RPLP2P05387 115 aaKnown RBP19.32■□□□□ 0.68
CMTM3-201ENST00000361909 STAG3L1P0CL83 205 aa19.32■□□□□ 0.68
CMTM3-201ENST00000361909 ELNP15502 786 aa19.32■□□□□ 0.68
CMTM3-201ENST00000361909 CCND3P30281 292 aaPredicted RBP19.32■□□□□ 0.68
CMTM3-201ENST00000361909 NR2C2P49116 596 aa19.32■□□□□ 0.68
CMTM3-201ENST00000361909 NDST2P52849 883 aa19.32■□□□□ 0.68
CMTM3-201ENST00000361909 DCAF4L1Q3SXM0 396 aa19.32■□□□□ 0.68
CMTM3-201ENST00000361909 FAM102AQ5T9C2 384 aaPredicted RBP19.32■□□□□ 0.68
CMTM3-201ENST00000361909 ZNF354CQ86Y25 554 aa19.32■□□□□ 0.68
CMTM3-201ENST00000361909 TMIGD2Q96BF3 282 aa19.32■□□□□ 0.68
CMTM3-201ENST00000361909 CPB2Q96IY4 423 aa19.32■□□□□ 0.68
CMTM3-201ENST00000361909 DOK1Q99704 481 aa19.32■□□□□ 0.68
CMTM3-201ENST00000361909 MTMR12Q9C0I1 747 aa19.32■□□□□ 0.68
CMTM3-201ENST00000361909 ZBTB26Q9HCK0 441 aa19.32■□□□□ 0.68
CMTM3-201ENST00000361909 MAN1C1Q9NR34 630 aa19.32■□□□□ 0.68
CMTM3-201ENST00000361909 INIPQ9NRY2 104 aa19.32■□□□□ 0.68
CMTM3-201ENST00000361909 SAGE1Q9NXZ1 904 aa19.32■□□□□ 0.68
CMTM3-201ENST00000361909 TJP2Q9UDY2 1190 aa19.32■□□□□ 0.68
CMTM3-201ENST00000361909 COQ6Q9Y2Z9 468 aa19.32■□□□□ 0.68
CMTM3-201ENST00000361909 HEY1Q9Y5J3 304 aa19.32■□□□□ 0.68
CMTM3-201ENST00000361909 ANK1P16157 1881 aa19.32■□□□□ 0.68
CMTM3-201ENST00000361909 C2CD4BA6NLJ0 364 aa19.32■□□□□ 0.68
CMTM3-201ENST00000361909 DPYSL4O14531 572 aa19.32■□□□□ 0.68
CMTM3-201ENST00000361909 VAPBO95292 243 aa19.32■□□□□ 0.68
CMTM3-201ENST00000361909 METTL18O95568 372 aa19.32■□□□□ 0.68
CMTM3-201ENST00000361909 PDGFRBP09619 1106 aa19.32■□□□□ 0.68
CMTM3-201ENST00000361909 CRYBB1P53674 252 aaPredicted RBP19.32■□□□□ 0.68
CMTM3-201ENST00000361909 PRMT2P55345 433 aa19.32■□□□□ 0.68
CMTM3-201ENST00000361909 CXCL17Q6UXB2 119 aa19.32■□□□□ 0.68
CMTM3-201ENST00000361909 CDR2LQ86X02 465 aaPredicted RBP19.32■□□□□ 0.68
CMTM3-201ENST00000361909 MAPK15Q8TD08 544 aa19.32■□□□□ 0.68
CMTM3-201ENST00000361909 QKIQ96PU8 341 aaKnown RBP eCLIP19.32■□□□□ 0.68
CMTM3-201ENST00000361909 COQ10BQ9H8M1 238 aa19.32■□□□□ 0.68
CMTM3-201ENST00000361909 TRIM64A6NGJ6 449 aa19.31■□□□□ 0.68
CMTM3-201ENST00000361909 SOBPA7XYQ1 873 aa19.31■□□□□ 0.68
CMTM3-201ENST00000361909 MDM4O15151 490 aa19.31■□□□□ 0.68
CMTM3-201ENST00000361909 HSPA1AP0DMV8 641 aaKnown RBP19.31■□□□□ 0.68
CMTM3-201ENST00000361909 HSPA1BP0DMV9 641 aaKnown RBP19.31■□□□□ 0.68
CMTM3-201ENST00000361909 P4HA1P13674 534 aa19.31■□□□□ 0.68
CMTM3-201ENST00000361909 ENO3P13929 434 aaPredicted RBP19.31■□□□□ 0.68
CMTM3-201ENST00000361909 HOXA11P31270 313 aaPredicted RBP19.31■□□□□ 0.68
CMTM3-201ENST00000361909 RHDQ02161 417 aa19.31■□□□□ 0.68
CMTM3-201ENST00000361909 CCSAPQ6IQ19 270 aaPredicted RBP19.31■□□□□ 0.68
CMTM3-201ENST00000361909 CLVS1Q8IUQ0 354 aaPredicted RBP19.31■□□□□ 0.68
CMTM3-201ENST00000361909 PCSK9Q8NBP7 692 aaKnown RBP19.31■□□□□ 0.68
CMTM3-201ENST00000361909 RAET1EQ8TD07 263 aa19.31■□□□□ 0.68
CMTM3-201ENST00000361909 C12orf43Q96C57 262 aaKnown RBP19.31■□□□□ 0.68
CMTM3-201ENST00000361909 SNX15Q9NRS6 342 aa19.31■□□□□ 0.68
CMTM3-201ENST00000361909 GNPTGQ9UJJ9 305 aa19.31■□□□□ 0.68
CMTM3-201ENST00000361909 DYTNA2CJ06 578 aa19.3■□□□□ 0.68
CMTM3-201ENST00000361909 FUOMA2VDF0 154 aa19.3■□□□□ 0.68
CMTM3-201ENST00000361909 IL4RP24394 825 aa19.3■□□□□ 0.68
CMTM3-201ENST00000361909 PKNOX1P55347 436 aa19.3■□□□□ 0.68
CMTM3-201ENST00000361909 PTK2BQ14289 1009 aa19.3■□□□□ 0.68
CMTM3-201ENST00000361909 LSM12Q3MHD2 195 aaKnown RBP19.3■□□□□ 0.68
CMTM3-201ENST00000361909 NIPAL1Q6NVV3 410 aa19.3■□□□□ 0.68
CMTM3-201ENST00000361909 CATSPER4Q7RTX7 472 aa19.3■□□□□ 0.68
CMTM3-201ENST00000361909 ANKRD36BP1Q96IX9 119 aa19.3■□□□□ 0.68
CMTM3-201ENST00000361909 OSMRQ99650 979 aa19.3■□□□□ 0.68
CMTM3-201ENST00000361909 CDHR5Q9HBB8 845 aa19.3■□□□□ 0.68
CMTM3-201ENST00000361909 TMEM9Q9P0T7 183 aa19.3■□□□□ 0.68
CMTM3-201ENST00000361909 CDYLQ9Y232 598 aa19.3■□□□□ 0.68
CMTM3-201ENST00000361909 WDR27A2RRH5 827 aa19.3■□□□□ 0.68
CMTM3-201ENST00000361909 TRIM64BA6NI03 449 aa19.3■□□□□ 0.68
CMTM3-201ENST00000361909 G3V2L1 256 aa19.3■□□□□ 0.68
CMTM3-201ENST00000361909 FBP2O00757 339 aa19.3■□□□□ 0.68
CMTM3-201ENST00000361909 FKTNO75072 461 aa19.3■□□□□ 0.68
CMTM3-201ENST00000361909 TNNC2P02585 160 aa19.3■□□□□ 0.68
CMTM3-201ENST00000361909 OCM2P0CE71 109 aa19.3■□□□□ 0.68
CMTM3-201ENST00000361909 OCMP0CE72 109 aaPredicted RBP19.3■□□□□ 0.68
CMTM3-201ENST00000361909 PTPN1P18031 435 aaKnown RBP19.3■□□□□ 0.68
CMTM3-201ENST00000361909 SLC7A1P30825 629 aa19.3■□□□□ 0.68
CMTM3-201ENST00000361909 SPRP35270 261 aaPredicted RBP19.3■□□□□ 0.68
CMTM3-201ENST00000361909 GRM5P41594 1212 aa19.3■□□□□ 0.68
CMTM3-201ENST00000361909 RPL14P50914 215 aaKnown RBP19.3■□□□□ 0.68
CMTM3-201ENST00000361909 BCAP31P51572 246 aa19.3■□□□□ 0.68
CMTM3-201ENST00000361909 OSTNP61366 133 aa19.3■□□□□ 0.68
CMTM3-201ENST00000361909 SLC10A2Q12908 348 aaPredicted RBP19.3■□□□□ 0.68
CMTM3-201ENST00000361909 PRKAA1Q13131 559 aa19.3■□□□□ 0.68
CMTM3-201ENST00000361909 TRIM25Q14258 630 aaKnown RBP19.3■□□□□ 0.68
CMTM3-201ENST00000361909 FRG1Q14331 258 aaKnown RBP19.3■□□□□ 0.68
CMTM3-201ENST00000361909 SNX17Q15036 470 aa19.3■□□□□ 0.68
CMTM3-201ENST00000361909 TGFBIQ15582 683 aa19.3■□□□□ 0.68
CMTM3-201ENST00000361909 SPANXN3Q5MJ09 141 aa19.3■□□□□ 0.68
CMTM3-201ENST00000361909 PPM1LQ5SGD2 360 aa19.3■□□□□ 0.68
CMTM3-201ENST00000361909 IL23RQ5VWK5 629 aa19.3■□□□□ 0.68
CMTM3-201ENST00000361909 NOTUMQ6P988 496 aa19.3■□□□□ 0.68
CMTM3-201ENST00000361909 NT5DC4Q86YG4 428 aa19.3■□□□□ 0.68
CMTM3-201ENST00000361909 COLGALT2Q8IYK4 626 aa19.3■□□□□ 0.68
CMTM3-201ENST00000361909 PCDH19Q8TAB3 1148 aa19.3■□□□□ 0.68
CMTM3-201ENST00000361909 CHPT1Q8WUD6 406 aa19.3■□□□□ 0.68
CMTM3-201ENST00000361909 DRC3Q9H069 523 aa19.3■□□□□ 0.68
CMTM3-201ENST00000361909 XYLT2Q9H1B5 865 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms