RNA–Protein interactions for RNA: ENST00000361337.2

TOP1-201, Transcript of DNA topoisomerase I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP1, Length 3,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1-201ENST00000361337 CERS4Q9HA82 394 aa9.25□□□□□ -0.93
TOP1-201ENST00000361337 SIX4Q9UIU6 781 aa9.25□□□□□ -0.93
TOP1-201ENST00000361337 TMCO1Q9UM00 188 aa9.25□□□□□ -0.93
TOP1-201ENST00000361337 TNFSF13BQ9Y275 285 aa9.25□□□□□ -0.93
TOP1-201ENST00000361337 TRPV2Q9Y5S1 764 aa9.25□□□□□ -0.93
TOP1-201ENST00000361337 BIRC5O15392 142 aa9.25□□□□□ -0.93
TOP1-201ENST00000361337 ZSCAN9O15535 394 aaPredicted RBP9.25□□□□□ -0.93
TOP1-201ENST00000361337 FGFR3P22607 806 aa9.25□□□□□ -0.93
TOP1-201ENST00000361337 SDC4P31431 198 aa9.25□□□□□ -0.93
TOP1-201ENST00000361337 MAGEA3P43357 314 aa9.25□□□□□ -0.93
TOP1-201ENST00000361337 GABRB2P47870 512 aa9.25□□□□□ -0.93
TOP1-201ENST00000361337 PKNOX1P55347 436 aa9.25□□□□□ -0.93
TOP1-201ENST00000361337 PTPN11Q06124 597 aaPredicted RBP9.25□□□□□ -0.93
TOP1-201ENST00000361337 PDK1Q15118 436 aa9.25□□□□□ -0.93
TOP1-201ENST00000361337 TBCCQ15814 346 aa9.25□□□□□ -0.93
TOP1-201ENST00000361337 ZNF618Q5T7W0 954 aa9.25□□□□□ -0.93
TOP1-201ENST00000361337 OGFRL1Q5TC84 451 aaPredicted RBP9.25□□□□□ -0.93
TOP1-201ENST00000361337 LGSNQ5TDP6 509 aa9.25□□□□□ -0.93
TOP1-201ENST00000361337 TMEM214Q6NUQ4 689 aaKnown RBP9.25□□□□□ -0.93
TOP1-201ENST00000361337 ARCQ7LC44 396 aa9.25□□□□□ -0.93
TOP1-201ENST00000361337 FAM131BQ86XD5 332 aa9.25□□□□□ -0.93
TOP1-201ENST00000361337 SPNS2Q8IVW8 549 aa9.25□□□□□ -0.93
TOP1-201ENST00000361337 RAVER1Q8IY67 606 aaKnown RBP9.25□□□□□ -0.93
TOP1-201ENST00000361337 PLD6Q8N2A8 252 aaKnown RBP9.25□□□□□ -0.93
TOP1-201ENST00000361337 GRIN3AQ8TCU5 1115 aa9.25□□□□□ -0.93
TOP1-201ENST00000361337 URGCPQ8TCY9 931 aa9.25□□□□□ -0.93
TOP1-201ENST00000361337 USP13Q92995 863 aaPredicted RBP9.25□□□□□ -0.93
TOP1-201ENST00000361337 PPP1R14BQ96C90 147 aa9.25□□□□□ -0.93
TOP1-201ENST00000361337 LENG8Q96PV6 779 aaPredicted RBP9.25□□□□□ -0.93
TOP1-201ENST00000361337 AGO3Q9H9G7 860 aaKnown RBP9.25□□□□□ -0.93
TOP1-201ENST00000361337 FAM105AQ9NUU6 356 aa9.25□□□□□ -0.93
TOP1-201ENST00000361337 MKS1Q9NXB0 559 aa9.25□□□□□ -0.93
TOP1-201ENST00000361337 ITGA11Q9UKX5 1188 aa9.25□□□□□ -0.93
TOP1-201ENST00000361337 TRDMT1O14717 391 aaKnown RBP9.24□□□□□ -0.93
TOP1-201ENST00000361337 CRTAMO95727 393 aa9.24□□□□□ -0.93
TOP1-201ENST00000361337 ZNF865P0CJ78 1059 aaPredicted RBP9.24□□□□□ -0.93
TOP1-201ENST00000361337 COX4I1P13073 169 aa9.24□□□□□ -0.93
TOP1-201ENST00000361337 GPD2P43304 727 aa9.24□□□□□ -0.93
TOP1-201ENST00000361337 SESN2P58004 480 aaPredicted RBP9.24□□□□□ -0.93
TOP1-201ENST00000361337 PURAQ00577 322 aaKnown RBP9.24□□□□□ -0.93
TOP1-201ENST00000361337 FAM183BPQ6ZVS7 135 aa9.24□□□□□ -0.93
TOP1-201ENST00000361337 ZNF786Q8N393 782 aa9.24□□□□□ -0.93
TOP1-201ENST00000361337 FAM156AQ8NDB6 213 aa9.24□□□□□ -0.93
TOP1-201ENST00000361337 DGCR14Q96DF8 476 aaKnown RBP9.24□□□□□ -0.93
TOP1-201ENST00000361337 MCRS1Q96EZ8 462 aa9.24□□□□□ -0.93
TOP1-201ENST00000361337 CCDC28BQ9BUN5 200 aa9.24□□□□□ -0.93
TOP1-201ENST00000361337 KLC2Q9H0B6 622 aa9.24□□□□□ -0.93
TOP1-201ENST00000361337 RBM38Q9H0Z9 239 aaKnown RBP9.24□□□□□ -0.93
TOP1-201ENST00000361337 CXCL16Q9H2A7 254 aa9.24□□□□□ -0.93
TOP1-201ENST00000361337 WDR55Q9H6Y2 383 aaPredicted RBP9.24□□□□□ -0.93
TOP1-201ENST00000361337 COG4Q9H9E3 785 aa9.24□□□□□ -0.93
TOP1-201ENST00000361337 COPS7BQ9H9Q2 264 aaPredicted RBP9.24□□□□□ -0.93
TOP1-201ENST00000361337 KIAA1217Q5T5P2 1943 aa9.24□□□□□ -0.93
TOP1-201ENST00000361337 SMIM28A0A1B0GU29 152 aa9.24□□□□□ -0.93
TOP1-201ENST00000361337 C2CD4BA6NLJ0 364 aa9.24□□□□□ -0.93
TOP1-201ENST00000361337 KPNA7A9QM74 516 aa9.24□□□□□ -0.93
TOP1-201ENST00000361337 IL18RAPO95256 599 aa9.24□□□□□ -0.93
TOP1-201ENST00000361337 XRCC1P18887 633 aaPredicted RBP9.24□□□□□ -0.93
TOP1-201ENST00000361337 ETFBP38117 255 aa9.24□□□□□ -0.93
TOP1-201ENST00000361337 ZNF143P52747 638 aaPredicted RBP9.24□□□□□ -0.93
TOP1-201ENST00000361337 THOP1P52888 689 aa9.24□□□□□ -0.93
TOP1-201ENST00000361337 MS4A2Q01362 244 aa9.24□□□□□ -0.93
TOP1-201ENST00000361337 DLG2Q15700 870 aa9.24□□□□□ -0.93
TOP1-201ENST00000361337 CCDC14Q49A88 953 aa9.24□□□□□ -0.93
TOP1-201ENST00000361337 LDLRAP1Q5SW96 308 aa9.24□□□□□ -0.93
TOP1-201ENST00000361337 FAM171A1Q5VUB5 890 aa9.24□□□□□ -0.93
TOP1-201ENST00000361337 FAM219BQ5XKK7 198 aa9.24□□□□□ -0.93
TOP1-201ENST00000361337 DIS3LQ8TF46 1054 aaKnown RBP9.24□□□□□ -0.93
TOP1-201ENST00000361337 RNF139Q8WU17 664 aa9.24□□□□□ -0.93
TOP1-201ENST00000361337 MARK4Q96L34 752 aa9.24□□□□□ -0.93
TOP1-201ENST00000361337 ZNF560Q96MR9 790 aa9.24□□□□□ -0.93
TOP1-201ENST00000361337 MRPL45Q9BRJ2 306 aaKnown RBP9.24□□□□□ -0.93
TOP1-201ENST00000361337 LHX5Q9H2C1 402 aa9.24□□□□□ -0.93
TOP1-201ENST00000361337 PCDH18Q9HCL0 1135 aa9.24□□□□□ -0.93
TOP1-201ENST00000361337 MOCS1Q9NZB8 636 aa9.24□□□□□ -0.93
TOP1-201ENST00000361337 SSX2IPQ9Y2D8 614 aa9.24□□□□□ -0.93
TOP1-201ENST00000361337 F5P12259 2224 aa9.24□□□□□ -0.93
TOP1-201ENST00000361337 MYO18AQ92614 2054 aaKnown RBP9.24□□□□□ -0.93
TOP1-201ENST00000361337 COL4A4P53420 1690 aaPredicted RBP9.24□□□□□ -0.93
TOP1-201ENST00000361337 DOCK1Q14185 1865 aa9.24□□□□□ -0.93
TOP1-201ENST00000361337 H3BSA7 217 aa9.23□□□□□ -0.93
TOP1-201ENST00000361337 KLHL2O95198 593 aa9.23□□□□□ -0.93
TOP1-201ENST00000361337 BDNFP23560 247 aa9.23□□□□□ -0.93
TOP1-201ENST00000361337 CTGFP29279 349 aa9.23□□□□□ -0.93
TOP1-201ENST00000361337 DPP6P42658 865 aa9.23□□□□□ -0.93
TOP1-201ENST00000361337 ALDH7A1P49419 539 aaKnown RBP9.23□□□□□ -0.93
TOP1-201ENST00000361337 GATMP50440 423 aa9.23□□□□□ -0.93
TOP1-201ENST00000361337 LBX1P52954 281 aa9.23□□□□□ -0.93
TOP1-201ENST00000361337 TLE2Q04725 743 aa9.23□□□□□ -0.93
TOP1-201ENST00000361337 ART3Q13508 389 aa9.23□□□□□ -0.93
TOP1-201ENST00000361337 PACS1Q6VY07 963 aa9.23□□□□□ -0.93
TOP1-201ENST00000361337 PRR23CQ6ZRP0 262 aa9.23□□□□□ -0.93
TOP1-201ENST00000361337 PQLC1Q8N2U9 271 aa9.23□□□□□ -0.93
TOP1-201ENST00000361337 TMA16Q96EY4 203 aaKnown RBP9.23□□□□□ -0.93
TOP1-201ENST00000361337 SENP8Q96LD8 212 aa9.23□□□□□ -0.93
TOP1-201ENST00000361337 TMEM134Q9H6X4 195 aa9.23□□□□□ -0.93
TOP1-201ENST00000361337 MTMR10Q9NXD2 777 aa9.23□□□□□ -0.93
TOP1-201ENST00000361337 RRN3Q9NYV6 651 aa9.23□□□□□ -0.93
TOP1-201ENST00000361337 CPSF3Q9UKF6 684 aaKnown RBP9.23□□□□□ -0.93
TOP1-201ENST00000361337 SLC27A5Q9Y2P5 690 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms