RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 SERPIND1P05546 499 aa16.54■□□□□ 0.24
SCAF1-201ENST00000360565 CSH1P0DML2 217 aa16.54■□□□□ 0.24
SCAF1-201ENST00000360565 CSH2P0DML3 217 aa16.54■□□□□ 0.24
SCAF1-201ENST00000360565 CLCN5P51795 746 aa16.54■□□□□ 0.24
SCAF1-201ENST00000360565 CDH13P55290 713 aa16.54■□□□□ 0.24
SCAF1-201ENST00000360565 LILRA4P59901 499 aa16.54■□□□□ 0.24
SCAF1-201ENST00000360565 POTEHQ6S545 545 aa16.54■□□□□ 0.24
SCAF1-201ENST00000360565 ZNF567Q8N184 647 aa16.54■□□□□ 0.24
SCAF1-201ENST00000360565 SEPT8Q92599 483 aa16.54■□□□□ 0.24
SCAF1-201ENST00000360565 KLHL5Q96PQ7 755 aa16.54■□□□□ 0.24
SCAF1-201ENST00000360565 MRPL57Q9BQC6 102 aaKnown RBP16.54■□□□□ 0.24
SCAF1-201ENST00000360565 SPASTQ9UBP0 616 aa16.54■□□□□ 0.24
SCAF1-201ENST00000360565 MCM8Q9UJA3 840 aa16.54■□□□□ 0.24
SCAF1-201ENST00000360565 SCAMP3O14828 347 aaKnown RBP16.53■□□□□ 0.24
SCAF1-201ENST00000360565 PLIN3O60664 434 aa16.53■□□□□ 0.24
SCAF1-201ENST00000360565 MPSTP25325 297 aa16.53■□□□□ 0.24
SCAF1-201ENST00000360565 PIK3R1P27986 724 aa16.53■□□□□ 0.24
SCAF1-201ENST00000360565 CCNG1P51959 295 aa16.53■□□□□ 0.24
SCAF1-201ENST00000360565 PSME3P61289 254 aa16.53■□□□□ 0.24
SCAF1-201ENST00000360565 KHDC1Q4VXA5 237 aaKnown RBP16.53■□□□□ 0.24
SCAF1-201ENST00000360565 CCDC81Q6ZN84 652 aa16.53■□□□□ 0.24
SCAF1-201ENST00000360565 ADCK2Q7Z695 626 aa16.53■□□□□ 0.24
SCAF1-201ENST00000360565 HDAC10Q969S8 669 aa16.53■□□□□ 0.24
SCAF1-201ENST00000360565 MAF1Q9H063 256 aa16.53■□□□□ 0.24
SCAF1-201ENST00000360565 CDH19Q9H159 772 aa16.53■□□□□ 0.24
SCAF1-201ENST00000360565 ARHGEF3Q9NR81 526 aa16.53■□□□□ 0.24
SCAF1-201ENST00000360565 MSI1O43347 362 aaKnown RBP16.53■□□□□ 0.24
SCAF1-201ENST00000360565 UGT1A9O60656 530 aa16.53■□□□□ 0.24
SCAF1-201ENST00000360565 HOXB8P17481 243 aaPredicted RBP16.53■□□□□ 0.24
SCAF1-201ENST00000360565 UGT1A7Q9HAW7 530 aa16.53■□□□□ 0.24
SCAF1-201ENST00000360565 UGT1A10Q9HAW8 530 aa16.53■□□□□ 0.24
SCAF1-201ENST00000360565 UGT1A8Q9HAW9 530 aa16.53■□□□□ 0.24
SCAF1-201ENST00000360565 TAS2R1Q9NYW7 299 aa16.53■□□□□ 0.24
SCAF1-201ENST00000360565 RBPJLQ9UBG7 517 aa16.53■□□□□ 0.24
SCAF1-201ENST00000360565 PNMA8BQ9ULN7 279 aaPredicted RBP16.53■□□□□ 0.24
SCAF1-201ENST00000360565 TBKBP1A7MCY6 615 aa16.53■□□□□ 0.24
SCAF1-201ENST00000360565 CLOCKO15516 846 aa16.53■□□□□ 0.24
SCAF1-201ENST00000360565 HOXA2O43364 376 aa16.53■□□□□ 0.24
SCAF1-201ENST00000360565 RTN3O95197 1032 aaPredicted RBP16.53■□□□□ 0.24
SCAF1-201ENST00000360565 RPL9P32969 192 aaKnown RBP16.53■□□□□ 0.24
SCAF1-201ENST00000360565 ATN1P54259 1190 aaPredicted RBP16.53■□□□□ 0.24
SCAF1-201ENST00000360565 KLF10Q13118 480 aa16.53■□□□□ 0.24
SCAF1-201ENST00000360565 RP9Q8TA86 221 aaKnown RBP16.53■□□□□ 0.24
SCAF1-201ENST00000360565 TRPC4APQ8TEL6 797 aa16.53■□□□□ 0.24
SCAF1-201ENST00000360565 RMND5BQ96G75 393 aaPredicted RBP16.53■□□□□ 0.24
SCAF1-201ENST00000360565 GLOD4Q9HC38 313 aa16.53■□□□□ 0.24
SCAF1-201ENST00000360565 CATSPERZQ9NTU4 200 aa16.53■□□□□ 0.24
SCAF1-201ENST00000360565 DDX18Q9NVP1 670 aaKnown RBP16.53■□□□□ 0.24
SCAF1-201ENST00000360565 AP4S1Q9Y587 144 aa16.53■□□□□ 0.24
SCAF1-201ENST00000360565 PAGE1O75459 146 aa16.52■□□□□ 0.24
SCAF1-201ENST00000360565 ECHS1P30084 290 aa16.52■□□□□ 0.24
SCAF1-201ENST00000360565 SERPINB10P48595 397 aa16.52■□□□□ 0.24
SCAF1-201ENST00000360565 DDR2Q16832 855 aa16.52■□□□□ 0.24
SCAF1-201ENST00000360565 INSCQ1MX18 579 aa16.52■□□□□ 0.24
SCAF1-201ENST00000360565 RETSATQ6NUM9 610 aa16.52■□□□□ 0.24
SCAF1-201ENST00000360565 RRM2BQ7LG56 351 aa16.52■□□□□ 0.24
SCAF1-201ENST00000360565 ADCK1Q86TW2 530 aa16.52■□□□□ 0.24
SCAF1-201ENST00000360565 OR56A4Q8NGH8 313 aa16.52■□□□□ 0.24
SCAF1-201ENST00000360565 SEC14L1Q92503 715 aa16.52■□□□□ 0.24
SCAF1-201ENST00000360565 DLG3Q92796 817 aa16.52■□□□□ 0.24
SCAF1-201ENST00000360565 HGH1Q9BTY7 390 aa16.52■□□□□ 0.24
SCAF1-201ENST00000360565 CADM1Q9BY67 442 aaKnown RBP16.52■□□□□ 0.24
SCAF1-201ENST00000360565 ZYG11BQ9C0D3 744 aa16.52■□□□□ 0.24
SCAF1-201ENST00000360565 ELOVL6Q9H5J4 265 aa16.52■□□□□ 0.24
SCAF1-201ENST00000360565 SCHIP1Q9P0W5 487 aaPredicted RBP16.52■□□□□ 0.24
SCAF1-201ENST00000360565 LAMB4A4D0S4 1761 aa16.52■□□□□ 0.24
SCAF1-201ENST00000360565 PEX11AO75192 247 aa16.52■□□□□ 0.24
SCAF1-201ENST00000360565 PGM3O95394 542 aa16.52■□□□□ 0.24
SCAF1-201ENST00000360565 LRG1P02750 347 aa16.52■□□□□ 0.24
SCAF1-201ENST00000360565 FCGR1AP12314 374 aa16.52■□□□□ 0.24
SCAF1-201ENST00000360565 BFSP2Q13515 415 aa16.52■□□□□ 0.24
SCAF1-201ENST00000360565 MICU2Q8IYU8 434 aa16.52■□□□□ 0.24
SCAF1-201ENST00000360565 OR9Q1Q8NGQ5 310 aa16.52■□□□□ 0.24
SCAF1-201ENST00000360565 RNF145Q96MT1 663 aa16.52■□□□□ 0.24
SCAF1-201ENST00000360565 PARVBQ9HBI1 364 aa16.52■□□□□ 0.24
SCAF1-201ENST00000360565 CHCHD3Q9NX63 227 aaKnown RBP16.52■□□□□ 0.24
SCAF1-201ENST00000360565 SCN3BQ9NY72 215 aa16.52■□□□□ 0.24
SCAF1-201ENST00000360565 TMEM216Q9P0N5 145 aa16.52■□□□□ 0.24
SCAF1-201ENST00000360565 C5orf58C9J3I9 102 aa16.52■□□□□ 0.23
SCAF1-201ENST00000360565 BTBD19C9JJ37 291 aa16.52■□□□□ 0.23
SCAF1-201ENST00000360565 TM7SF2O76062 418 aa16.52■□□□□ 0.23
SCAF1-201ENST00000360565 SNRPB2P08579 225 aaKnown RBP16.52■□□□□ 0.23
SCAF1-201ENST00000360565 GRIA1P42261 906 aa16.52■□□□□ 0.23
SCAF1-201ENST00000360565 FSTL1Q12841 308 aa16.52■□□□□ 0.23
SCAF1-201ENST00000360565 C6orf89Q6UWU4 347 aa16.52■□□□□ 0.23
SCAF1-201ENST00000360565 STAG3L4Q8TBR4 150 aa16.52■□□□□ 0.23
SCAF1-201ENST00000360565 TRAPPC9Q96Q05 1148 aa16.52■□□□□ 0.23
SCAF1-201ENST00000360565 UXTQ9UBK9 157 aaPredicted RBP16.52■□□□□ 0.23
SCAF1-201ENST00000360565 LDLRP01130 860 aa16.51■□□□□ 0.23
SCAF1-201ENST00000360565 LBPP18428 481 aa16.51■□□□□ 0.23
SCAF1-201ENST00000360565 POU5F1Q01860 360 aaKnown RBP16.51■□□□□ 0.23
SCAF1-201ENST00000360565 TRAF2Q12933 501 aa16.51■□□□□ 0.23
SCAF1-201ENST00000360565 MSS51Q4VC12 460 aa16.51■□□□□ 0.23
SCAF1-201ENST00000360565 RINLQ6ZS11 566 aa16.51■□□□□ 0.23
SCAF1-201ENST00000360565 TAS1R3Q7RTX0 852 aa16.51■□□□□ 0.23
SCAF1-201ENST00000360565 TTC30AQ86WT1 665 aa16.51■□□□□ 0.23
SCAF1-201ENST00000360565 CENPLQ8N0S6 344 aaPredicted RBP16.51■□□□□ 0.23
SCAF1-201ENST00000360565 EXOC2Q96KP1 924 aa16.51■□□□□ 0.23
SCAF1-201ENST00000360565 DPY30Q9C005 99 aa16.51■□□□□ 0.23
SCAF1-201ENST00000360565 TMEM161AQ9NX61 479 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms