RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 WDFY4Q6ZS81 3184 aa12.61□□□□□ -0.39
NIF3L1-201ENST00000359683 GCATO75600 419 aa12.61□□□□□ -0.39
NIF3L1-201ENST00000359683 TIE1P35590 1138 aa12.61□□□□□ -0.39
NIF3L1-201ENST00000359683 MMP13P45452 471 aa12.61□□□□□ -0.39
NIF3L1-201ENST00000359683 PTPN5P54829 565 aa12.61□□□□□ -0.39
NIF3L1-201ENST00000359683 GDF10P55107 478 aa12.61□□□□□ -0.39
NIF3L1-201ENST00000359683 NSUN2Q08J23 767 aaKnown RBP eCLIP12.61□□□□□ -0.39
NIF3L1-201ENST00000359683 ZBTB17Q13105 803 aa12.61□□□□□ -0.39
NIF3L1-201ENST00000359683 PLPP6Q8IY26 295 aa12.61□□□□□ -0.39
NIF3L1-201ENST00000359683 CCDC105Q8IYK2 499 aa12.61□□□□□ -0.39
NIF3L1-201ENST00000359683 ZNF567Q8N184 647 aa12.61□□□□□ -0.39
NIF3L1-201ENST00000359683 PGBD5Q8N414 524 aa12.61□□□□□ -0.39
NIF3L1-201ENST00000359683 ZNF513Q8N8E2 541 aaPredicted RBP12.61□□□□□ -0.39
NIF3L1-201ENST00000359683 CEP112Q8N8E3 955 aa12.61□□□□□ -0.39
NIF3L1-201ENST00000359683 SLCO2A1Q92959 643 aa12.61□□□□□ -0.39
NIF3L1-201ENST00000359683 TEKT5Q96M29 485 aa12.61□□□□□ -0.39
NIF3L1-201ENST00000359683 RUNDC3BQ96NL0 473 aa12.61□□□□□ -0.39
NIF3L1-201ENST00000359683 ACOX2Q99424 681 aa12.61□□□□□ -0.39
NIF3L1-201ENST00000359683 TBC1D17Q9HA65 648 aa12.61□□□□□ -0.39
NIF3L1-201ENST00000359683 LMAN1LQ9HAT1 526 aa12.61□□□□□ -0.39
NIF3L1-201ENST00000359683 SEPT10Q9P0V9 454 aa12.61□□□□□ -0.39
NIF3L1-201ENST00000359683 TRHDEQ9UKU6 1024 aa12.61□□□□□ -0.39
NIF3L1-201ENST00000359683 ATP8A1Q9Y2Q0 1164 aa12.61□□□□□ -0.39
NIF3L1-201ENST00000359683 FCF1Q9Y324 198 aaKnown RBP12.61□□□□□ -0.39
NIF3L1-201ENST00000359683 ATG2BQ96BY7 2078 aa12.6□□□□□ -0.39
NIF3L1-201ENST00000359683 FAM170BA6NMN3 283 aa12.6□□□□□ -0.39
NIF3L1-201ENST00000359683 TTC34A8MYJ7 566 aa12.6□□□□□ -0.39
NIF3L1-201ENST00000359683 SGK1O00141 431 aa12.6□□□□□ -0.39
NIF3L1-201ENST00000359683 RNF103O00237 685 aa12.6□□□□□ -0.39
NIF3L1-201ENST00000359683 MUSKO15146 869 aa12.6□□□□□ -0.39
NIF3L1-201ENST00000359683 PDGFBP01127 241 aaPredicted RBP12.6□□□□□ -0.39
NIF3L1-201ENST00000359683 HSPA9P38646 679 aaKnown RBP12.6□□□□□ -0.39
NIF3L1-201ENST00000359683 IL12RB1P42701 662 aa12.6□□□□□ -0.39
NIF3L1-201ENST00000359683 PTGIRP43119 386 aa12.6□□□□□ -0.39
NIF3L1-201ENST00000359683 NRLP54845 237 aa12.6□□□□□ -0.39
NIF3L1-201ENST00000359683 SEC13P55735 322 aa12.6□□□□□ -0.39
NIF3L1-201ENST00000359683 C2orf54Q08AI8 447 aa12.6□□□□□ -0.39
NIF3L1-201ENST00000359683 ACCSLQ4AC99 568 aa12.6□□□□□ -0.39
NIF3L1-201ENST00000359683 HSF5Q4G112 596 aaPredicted RBP12.6□□□□□ -0.39
NIF3L1-201ENST00000359683 FNDC3BQ53EP0 1204 aaKnown RBP12.6□□□□□ -0.39
NIF3L1-201ENST00000359683 FAM182AQ5T1J6 154 aa12.6□□□□□ -0.39
NIF3L1-201ENST00000359683 KLHL7Q8IXQ5 586 aa12.6□□□□□ -0.39
NIF3L1-201ENST00000359683 BBS5Q8N3I7 341 aa12.6□□□□□ -0.39
NIF3L1-201ENST00000359683 PCDH20Q8N6Y1 951 aaKnown RBP12.6□□□□□ -0.39
NIF3L1-201ENST00000359683 IL17RCQ8NAC3 791 aa12.6□□□□□ -0.39
NIF3L1-201ENST00000359683 TSEN2Q8NCE0 465 aaKnown RBP12.6□□□□□ -0.39
NIF3L1-201ENST00000359683 PTPRN2Q92932 1015 aa12.6□□□□□ -0.39
NIF3L1-201ENST00000359683 PHOX2BQ99453 314 aa12.6□□□□□ -0.39
NIF3L1-201ENST00000359683 PRRX2Q99811 253 aa12.6□□□□□ -0.39
NIF3L1-201ENST00000359683 MGME1Q9BQP7 344 aa12.6□□□□□ -0.39
NIF3L1-201ENST00000359683 CINPQ9BW66 212 aaPredicted RBP12.6□□□□□ -0.39
NIF3L1-201ENST00000359683 FOXQ1Q9C009 403 aa12.6□□□□□ -0.39
NIF3L1-201ENST00000359683 LHX3Q9UBR4 397 aa12.6□□□□□ -0.39
NIF3L1-201ENST00000359683 SUN2Q9UH99 717 aa12.6□□□□□ -0.39
NIF3L1-201ENST00000359683 SLC8A2Q9UPR5 921 aa12.6□□□□□ -0.39
NIF3L1-201ENST00000359683 NEU2Q9Y3R4 380 aa12.6□□□□□ -0.39
NIF3L1-201ENST00000359683 STON1Q9Y6Q2 735 aa12.6□□□□□ -0.39
NIF3L1-201ENST00000359683 MUC22E2RYF6 1773 aaPredicted RBP12.6□□□□□ -0.39
NIF3L1-201ENST00000359683 CTAGE15A4D2H0 777 aa12.59□□□□□ -0.39
NIF3L1-201ENST00000359683 WASH3PC4AMC7 463 aa12.59□□□□□ -0.39
NIF3L1-201ENST00000359683 ZBTB24O43167 697 aaPredicted RBP12.59□□□□□ -0.39
NIF3L1-201ENST00000359683 RNF40O75150 1001 aa12.59□□□□□ -0.39
NIF3L1-201ENST00000359683 STK10O94804 968 aaKnown RBP12.59□□□□□ -0.39
NIF3L1-201ENST00000359683 HLA-DQB2P05538 268 aa12.59□□□□□ -0.39
NIF3L1-201ENST00000359683 CTAGE8P0CG41 777 aa12.59□□□□□ -0.39
NIF3L1-201ENST00000359683 CR2P20023 1033 aa12.59□□□□□ -0.39
NIF3L1-201ENST00000359683 PRKCHP24723 683 aa12.59□□□□□ -0.39
NIF3L1-201ENST00000359683 NTSR1P30989 418 aa12.59□□□□□ -0.39
NIF3L1-201ENST00000359683 CD68P34810 354 aaPredicted RBP12.59□□□□□ -0.39
NIF3L1-201ENST00000359683 CSNK1DP48730 415 aa12.59□□□□□ -0.39
NIF3L1-201ENST00000359683 LRRC32Q14392 662 aa12.59□□□□□ -0.39
NIF3L1-201ENST00000359683 ZNF235Q14590 738 aa12.59□□□□□ -0.39
NIF3L1-201ENST00000359683 UBXN2BQ14CS0 331 aa12.59□□□□□ -0.39
NIF3L1-201ENST00000359683 P3H1Q32P28 736 aa12.59□□□□□ -0.39
NIF3L1-201ENST00000359683 HNRNPA1L2Q32P51 320 aaKnown RBP12.59□□□□□ -0.39
NIF3L1-201ENST00000359683 C2orf27AQ580R0 203 aa12.59□□□□□ -0.39
NIF3L1-201ENST00000359683 ANKRD20A2Q5SQ80 823 aa12.59□□□□□ -0.39
NIF3L1-201ENST00000359683 ANKRD20A1Q5TYW2 823 aa12.59□□□□□ -0.39
NIF3L1-201ENST00000359683 ANKRD20A3Q5VUR7 823 aa12.59□□□□□ -0.39
NIF3L1-201ENST00000359683 ALG1LQ6GMV1 187 aa12.59□□□□□ -0.39
NIF3L1-201ENST00000359683 C22orf39Q6P5X5 142 aa12.59□□□□□ -0.39
NIF3L1-201ENST00000359683 SERPINA13PQ6UXR4 307 aa12.59□□□□□ -0.39
NIF3L1-201ENST00000359683 PID1Q7Z2X4 250 aa12.59□□□□□ -0.39
NIF3L1-201ENST00000359683 TRMT11Q7Z4G4 463 aaKnown RBP12.59□□□□□ -0.39
NIF3L1-201ENST00000359683 CTAGE6Q86UF2 777 aa12.59□□□□□ -0.39
NIF3L1-201ENST00000359683 CTAGE4Q8IX94 777 aa12.59□□□□□ -0.39
NIF3L1-201ENST00000359683 CHPFQ8IZ52 775 aa12.59□□□□□ -0.39
NIF3L1-201ENST00000359683 GRK7Q8WTQ7 553 aa12.59□□□□□ -0.39
NIF3L1-201ENST00000359683 CLDN23Q96B33 292 aa12.59□□□□□ -0.39
NIF3L1-201ENST00000359683 CCDC114Q96M63 670 aa12.59□□□□□ -0.39
NIF3L1-201ENST00000359683 SPATA13Q96N96 652 aa12.59□□□□□ -0.39
NIF3L1-201ENST00000359683 AGAP3Q96P47 875 aa12.59□□□□□ -0.39
NIF3L1-201ENST00000359683 KRT12Q99456 494 aa12.59□□□□□ -0.39
NIF3L1-201ENST00000359683 GABRG3Q99928 467 aa12.59□□□□□ -0.39
NIF3L1-201ENST00000359683 CARD6Q9BX69 1037 aa12.59□□□□□ -0.39
NIF3L1-201ENST00000359683 CEP41Q9BYV8 373 aa12.59□□□□□ -0.39
NIF3L1-201ENST00000359683 NT5MQ9NPB1 228 aa12.59□□□□□ -0.39
NIF3L1-201ENST00000359683 ZDHHC4Q9NPG8 344 aa12.59□□□□□ -0.39
NIF3L1-201ENST00000359683 CACNA2D2Q9NY47 1150 aa12.59□□□□□ -0.39
NIF3L1-201ENST00000359683 TARSL2A2RTX5 802 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms