RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 ENPP2Q13822 863 aa15.49■□□□□ 0.07
TPM1-206ENST00000358278 CYTH1Q15438 398 aa15.49■□□□□ 0.07
TPM1-206ENST00000358278 OASLQ15646 514 aaKnown RBP15.49■□□□□ 0.07
TPM1-206ENST00000358278 PKN3Q6P5Z2 889 aa15.49■□□□□ 0.07
TPM1-206ENST00000358278 TSEN2Q8NCE0 465 aaKnown RBP15.49■□□□□ 0.07
TPM1-206ENST00000358278 FRS2Q8WU20 508 aa15.49■□□□□ 0.07
TPM1-206ENST00000358278 MAGOHBQ96A72 148 aaKnown RBP15.49■□□□□ 0.07
TPM1-206ENST00000358278 PBXIP1Q96AQ6 731 aa15.49■□□□□ 0.07
TPM1-206ENST00000358278 ISG20Q96AZ6 181 aaKnown RBP15.49■□□□□ 0.07
TPM1-206ENST00000358278 ERLEC1Q96DZ1 483 aa15.49■□□□□ 0.07
TPM1-206ENST00000358278 EXOC2Q96KP1 924 aa15.49■□□□□ 0.07
TPM1-206ENST00000358278 GABRG3Q99928 467 aa15.49■□□□□ 0.07
TPM1-206ENST00000358278 CHRDQ9H2X0 955 aa15.49■□□□□ 0.07
TPM1-206ENST00000358278 MTG2Q9H4K7 406 aa15.49■□□□□ 0.07
TPM1-206ENST00000358278 NT5MQ9NPB1 228 aa15.49■□□□□ 0.07
TPM1-206ENST00000358278 RBM22Q9NW64 420 aaKnown RBP eCLIP15.49■□□□□ 0.07
TPM1-206ENST00000358278 SUN2Q9UH99 717 aa15.49■□□□□ 0.07
TPM1-206ENST00000358278 PDE2AO00408 941 aaPredicted RBP15.48■□□□□ 0.07
TPM1-206ENST00000358278 ADAM23O75077 832 aa15.48■□□□□ 0.07
TPM1-206ENST00000358278 PHF2O75151 1096 aa15.48■□□□□ 0.07
TPM1-206ENST00000358278 IGSF6O95976 241 aa15.48■□□□□ 0.07
TPM1-206ENST00000358278 AOC1P19801 751 aa15.48■□□□□ 0.07
TPM1-206ENST00000358278 HSPA9P38646 679 aaKnown RBP15.48■□□□□ 0.07
TPM1-206ENST00000358278 MAGEA9P43362 315 aa15.48■□□□□ 0.07
TPM1-206ENST00000358278 SNRPD1P62314 119 aaKnown RBP15.48■□□□□ 0.07
TPM1-206ENST00000358278 CKAP4Q07065 602 aaKnown RBP15.48■□□□□ 0.07
TPM1-206ENST00000358278 ITKQ08881 620 aa15.48■□□□□ 0.07
TPM1-206ENST00000358278 ZBTB17Q13105 803 aa15.48■□□□□ 0.07
TPM1-206ENST00000358278 TUBB2AQ13885 445 aa15.48■□□□□ 0.07
TPM1-206ENST00000358278 WHAMMP3Q1A5X7 153 aa15.48■□□□□ 0.07
TPM1-206ENST00000358278 DRICH1Q6PGQ1 229 aaPredicted RBP15.48■□□□□ 0.07
TPM1-206ENST00000358278 RYBPQ8N488 228 aaPredicted RBP15.48■□□□□ 0.07
TPM1-206ENST00000358278 TEX26Q8N6G2 289 aa15.48■□□□□ 0.07
TPM1-206ENST00000358278 ZNF419Q96HQ0 510 aaPredicted RBP15.48■□□□□ 0.07
TPM1-206ENST00000358278 GDAP1L1Q96MZ0 367 aa15.48■□□□□ 0.07
TPM1-206ENST00000358278 AGAP3Q96P47 875 aa15.48■□□□□ 0.07
TPM1-206ENST00000358278 PSKH2Q96QS6 385 aa15.48■□□□□ 0.07
TPM1-206ENST00000358278 TUBB2BQ9BVA1 445 aa15.48■□□□□ 0.07
TPM1-206ENST00000358278 KLHL8Q9P2G9 620 aaPredicted RBP15.48■□□□□ 0.07
TPM1-206ENST00000358278 LHX3Q9UBR4 397 aa15.48■□□□□ 0.07
TPM1-206ENST00000358278 FARP1Q9Y4F1 1045 aaPredicted RBP15.48■□□□□ 0.07
TPM1-206ENST00000358278 MRFAP1Q9Y605 127 aa15.48■□□□□ 0.07
TPM1-206ENST00000358278 KMT2EQ8IZD2 1858 aa15.48■□□□□ 0.07
TPM1-206ENST00000358278 CHURC1-FNTBB4DL54 471 aa15.48■□□□□ 0.07
TPM1-206ENST00000358278 SIN3BO75182 1162 aa15.48■□□□□ 0.07
TPM1-206ENST00000358278 ITGAVP06756 1048 aa15.48■□□□□ 0.07
TPM1-206ENST00000358278 PTPN3P26045 913 aa15.48■□□□□ 0.07
TPM1-206ENST00000358278 CLCN5P51795 746 aa15.48■□□□□ 0.07
TPM1-206ENST00000358278 MAXP61244 160 aa15.48■□□□□ 0.07
TPM1-206ENST00000358278 CYP1B1Q16678 543 aa15.48■□□□□ 0.07
TPM1-206ENST00000358278 TEX44Q53QW1 395 aa15.48■□□□□ 0.07
TPM1-206ENST00000358278 ATXN7L2Q5T6C5 722 aaPredicted RBP15.48■□□□□ 0.07
TPM1-206ENST00000358278 GSTA5Q7RTV2 222 aa15.48■□□□□ 0.07
TPM1-206ENST00000358278 FAM71DQ8N9W8 422 aa15.48■□□□□ 0.07
TPM1-206ENST00000358278 C12orf50Q8NA57 414 aaPredicted RBP15.48■□□□□ 0.07
TPM1-206ENST00000358278 OR2AP1Q8NGE2 309 aa15.48■□□□□ 0.07
TPM1-206ENST00000358278 PTPRN2Q92932 1015 aa15.48■□□□□ 0.07
TPM1-206ENST00000358278 VAT1Q99536 393 aa15.48■□□□□ 0.07
TPM1-206ENST00000358278 IL12RB2Q99665 862 aa15.48■□□□□ 0.07
TPM1-206ENST00000358278 POLR1EQ9GZS1 481 aaKnown RBP15.48■□□□□ 0.07
TPM1-206ENST00000358278 EPHX3Q9H6B9 360 aa15.48■□□□□ 0.07
TPM1-206ENST00000358278 AMACRQ9UHK6 382 aa15.48■□□□□ 0.07
TPM1-206ENST00000358278 TARSL2A2RTX5 802 aaKnown RBP15.47■□□□□ 0.07
TPM1-206ENST00000358278 PI15O43692 258 aa15.47■□□□□ 0.07
TPM1-206ENST00000358278 ZNF821O75541 412 aaPredicted RBP15.47■□□□□ 0.07
TPM1-206ENST00000358278 GSRP00390 522 aa15.47■□□□□ 0.07
TPM1-206ENST00000358278 HLA-DQB2P05538 268 aa15.47■□□□□ 0.07
TPM1-206ENST00000358278 KCNJ1P48048 391 aa15.47■□□□□ 0.07
TPM1-206ENST00000358278 WASHC5Q12768 1159 aa15.47■□□□□ 0.07
TPM1-206ENST00000358278 GAS6Q14393 721 aa15.47■□□□□ 0.07
TPM1-206ENST00000358278 CARD16Q5EG05 197 aa15.47■□□□□ 0.07
TPM1-206ENST00000358278 FAM182AQ5T1J6 154 aa15.47■□□□□ 0.07
TPM1-206ENST00000358278 CCDC137Q6PK04 289 aaKnown RBP15.47■□□□□ 0.07
TPM1-206ENST00000358278 SYT13Q7L8C5 426 aa15.47■□□□□ 0.07
TPM1-206ENST00000358278 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.47■□□□□ 0.07
TPM1-206ENST00000358278 CCDC89Q8N998 374 aa15.47■□□□□ 0.07
TPM1-206ENST00000358278 OR6K2Q8NGY2 324 aa15.47■□□□□ 0.07
TPM1-206ENST00000358278 MGME1Q9BQP7 344 aa15.47■□□□□ 0.07
TPM1-206ENST00000358278 IER2Q9BTL4 223 aa15.47■□□□□ 0.07
TPM1-206ENST00000358278 DDX47Q9H0S4 455 aaKnown RBP15.47■□□□□ 0.07
TPM1-206ENST00000358278 USP29Q9HBJ7 922 aa15.47■□□□□ 0.07
TPM1-206ENST00000358278 CCDC188H7C350 402 aa15.46■□□□□ 0.07
TPM1-206ENST00000358278 MUSKO15146 869 aa15.46■□□□□ 0.07
TPM1-206ENST00000358278 IFNB1P01574 187 aa15.46■□□□□ 0.07
TPM1-206ENST00000358278 STIP1P31948 543 aaKnown RBP15.46■□□□□ 0.07
TPM1-206ENST00000358278 CHRNA3P32297 505 aa15.46■□□□□ 0.07
TPM1-206ENST00000358278 ACTN2P35609 894 aa15.46■□□□□ 0.07
TPM1-206ENST00000358278 COILP38432 576 aaPredicted RBP15.46■□□□□ 0.07
TPM1-206ENST00000358278 FNTAP49354 379 aa15.46■□□□□ 0.07
TPM1-206ENST00000358278 SCNN1BP51168 640 aa15.46■□□□□ 0.07
TPM1-206ENST00000358278 CCNHP51946 323 aaPredicted RBP15.46■□□□□ 0.07
TPM1-206ENST00000358278 GDF10P55107 478 aa15.46■□□□□ 0.07
TPM1-206ENST00000358278 LMNB2Q03252 620 aa15.46■□□□□ 0.07
TPM1-206ENST00000358278 MTAPQ13126 283 aa15.46■□□□□ 0.07
TPM1-206ENST00000358278 CAMK2GQ13555 558 aaPredicted RBP15.46■□□□□ 0.07
TPM1-206ENST00000358278 ELAVL3Q14576 367 aaKnown RBP15.46■□□□□ 0.07
TPM1-206ENST00000358278 CRY1Q16526 586 aa15.46■□□□□ 0.07
TPM1-206ENST00000358278 C9orf64Q5T6V5 341 aa15.46■□□□□ 0.07
TPM1-206ENST00000358278 KIAA1211LQ6NV74 962 aa15.46■□□□□ 0.07
TPM1-206ENST00000358278 DPY19L3Q6ZPD9 716 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms