RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 FBXO30Q8TB52 745 aa12.99□□□□□ -0.33
SMC4-202ENST00000357388 EZH1Q92800 747 aaPredicted RBP12.99□□□□□ -0.33
SMC4-202ENST00000357388 BBS4Q96RK4 519 aa12.99□□□□□ -0.33
SMC4-202ENST00000357388 ZNF180Q9UJW8 692 aa12.99□□□□□ -0.33
SMC4-202ENST00000357388 NUDT17P0C025 328 aa12.99□□□□□ -0.33
SMC4-202ENST00000357388 CYP2A6P11509 494 aaPredicted RBP12.99□□□□□ -0.33
SMC4-202ENST00000357388 INSCQ1MX18 579 aa12.99□□□□□ -0.33
SMC4-202ENST00000357388 FAM92BQ6ZTR7 304 aa12.99□□□□□ -0.33
SMC4-202ENST00000357388 PTAR1Q7Z6K3 402 aaPredicted RBP12.99□□□□□ -0.33
SMC4-202ENST00000357388 LRRC20Q8TCA0 184 aa12.99□□□□□ -0.33
SMC4-202ENST00000357388 HM13Q8TCT9 377 aa12.99□□□□□ -0.33
SMC4-202ENST00000357388 TMEM159Q96B96 161 aa12.99□□□□□ -0.33
SMC4-202ENST00000357388 PPP3R2Q96LZ3 170 aa12.99□□□□□ -0.33
SMC4-202ENST00000357388 CITED4Q96RK1 184 aa12.99□□□□□ -0.33
SMC4-202ENST00000357388 HGH1Q9BTY7 390 aa12.99□□□□□ -0.33
SMC4-202ENST00000357388 OR56A5P0C7T3 313 aa12.99□□□□□ -0.33
SMC4-202ENST00000357388 COX7A2P14406 83 aa12.99□□□□□ -0.33
SMC4-202ENST00000357388 CAP2P40123 477 aa12.99□□□□□ -0.33
SMC4-202ENST00000357388 PTGES3Q15185 160 aaKnown RBP12.99□□□□□ -0.33
SMC4-202ENST00000357388 RPTNQ6XPR3 784 aa12.99□□□□□ -0.33
SMC4-202ENST00000357388 ILDR2Q71H61 639 aa12.99□□□□□ -0.33
SMC4-202ENST00000357388 TBC1D21Q8IYX1 336 aa12.99□□□□□ -0.33
SMC4-202ENST00000357388 PIK3R3Q92569 461 aa12.99□□□□□ -0.33
SMC4-202ENST00000357388 UBE2E3Q969T4 207 aa12.99□□□□□ -0.33
SMC4-202ENST00000357388 PCDHGA10Q9Y5H3 936 aa12.99□□□□□ -0.33
SMC4-202ENST00000357388 KLRC2P26717 231 aa12.98□□□□□ -0.33
SMC4-202ENST00000357388 NTSP30990 170 aa12.98□□□□□ -0.33
SMC4-202ENST00000357388 EPHX2P34913 555 aa12.98□□□□□ -0.33
SMC4-202ENST00000357388 RPA3P35244 121 aaPredicted RBP12.98□□□□□ -0.33
SMC4-202ENST00000357388 MBOAT7Q96N66 472 aa12.98□□□□□ -0.33
SMC4-202ENST00000357388 RAB23Q9ULC3 237 aa12.98□□□□□ -0.33
SMC4-202ENST00000357388 ZNF232Q9UNY5 417 aa12.98□□□□□ -0.33
SMC4-202ENST00000357388 CRYL1Q9Y2S2 319 aa12.98□□□□□ -0.33
SMC4-202ENST00000357388 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.98□□□□□ -0.331e-7■■■□□ 17.3
SMC4-202ENST00000357388 DHRS12A0PJE2 317 aa12.98□□□□□ -0.33
SMC4-202ENST00000357388 MED24O75448 989 aa12.98□□□□□ -0.33
SMC4-202ENST00000357388 TRMUO75648 421 aaKnown RBP12.98□□□□□ -0.33
SMC4-202ENST00000357388 MLYCDO95822 493 aa12.98□□□□□ -0.33
SMC4-202ENST00000357388 SERPINF2P08697 491 aa12.98□□□□□ -0.33
SMC4-202ENST00000357388 PPIBP23284 216 aaKnown RBP12.98□□□□□ -0.33
SMC4-202ENST00000357388 ALDH9A1P49189 494 aa12.98□□□□□ -0.33
SMC4-202ENST00000357388 ERICH5Q6P6B1 374 aa12.98□□□□□ -0.33
SMC4-202ENST00000357388 ACOT1Q86TX2 421 aa12.98□□□□□ -0.33
SMC4-202ENST00000357388 PCDH20Q8N6Y1 951 aaKnown RBP12.98□□□□□ -0.33
SMC4-202ENST00000357388 CLHC1Q8NHS4 586 aa12.98□□□□□ -0.33
SMC4-202ENST00000357388 TBL1YQ9BQ87 522 aa12.98□□□□□ -0.33
SMC4-202ENST00000357388 XPNPEP3Q9NQH7 507 aa12.98□□□□□ -0.33
SMC4-202ENST00000357388 TOR4AQ9NXH8 423 aa12.98□□□□□ -0.33
SMC4-202ENST00000357388 EMC3Q9P0I2 261 aa12.98□□□□□ -0.33
SMC4-202ENST00000357388 OPTCQ9UBM4 332 aa12.98□□□□□ -0.33
SMC4-202ENST00000357388 MAGEL2Q9UJ55 1249 aa12.98□□□□□ -0.33
SMC4-202ENST00000357388 PSMD13Q9UNM6 376 aa12.98□□□□□ -0.33
SMC4-202ENST00000357388 ST3GAL5Q9UNP4 418 aa12.98□□□□□ -0.33
SMC4-202ENST00000357388 WDR37Q9Y2I8 494 aa12.98□□□□□ -0.33
SMC4-202ENST00000357388 GIT1Q9Y2X7 761 aa12.98□□□□□ -0.33
SMC4-202ENST00000357388 CNTNAP4Q9C0A0 1308 aa12.98□□□□□ -0.33
SMC4-202ENST00000357388 FAM240BA0A1B0GVZ2 78 aa12.98□□□□□ -0.33
SMC4-202ENST00000357388 RBAK-RBAKDNI3L0D1 243 aa12.98□□□□□ -0.33
SMC4-202ENST00000357388 BACE1P56817 501 aa12.98□□□□□ -0.33
SMC4-202ENST00000357388 KCNJ2P63252 427 aa12.98□□□□□ -0.33
SMC4-202ENST00000357388 EFR3AQ14156 821 aa12.98□□□□□ -0.33
SMC4-202ENST00000357388 ATG9AQ7Z3C6 839 aa12.98□□□□□ -0.33
SMC4-202ENST00000357388 FBXO33Q7Z6M2 555 aa12.98□□□□□ -0.33
SMC4-202ENST00000357388 KATNAL2Q8IYT4 538 aa12.98□□□□□ -0.33
SMC4-202ENST00000357388 ZFP28Q8NHY6 868 aa12.98□□□□□ -0.33
SMC4-202ENST00000357388 RXFP2Q8WXD0 754 aa12.98□□□□□ -0.33
SMC4-202ENST00000357388 RTKNQ9BST9 563 aa12.98□□□□□ -0.33
SMC4-202ENST00000357388 VPS45Q9NRW7 570 aa12.98□□□□□ -0.33
SMC4-202ENST00000357388 MLXQ9UH92 298 aa12.98□□□□□ -0.33
SMC4-202ENST00000357388 ENTPD4Q9Y227 616 aa12.98□□□□□ -0.33
SMC4-202ENST00000357388 MRPS7Q9Y2R9 242 aaKnown RBP12.98□□□□□ -0.33
SMC4-202ENST00000357388 CBX4O00257 560 aa12.98□□□□□ -0.33
SMC4-202ENST00000357388 VEGFAP15692 232 aaPredicted RBP12.98□□□□□ -0.33
SMC4-202ENST00000357388 ZNF37AP17032 561 aaPredicted RBP12.98□□□□□ -0.33
SMC4-202ENST00000357388 IL2P60568 153 aa12.98□□□□□ -0.33
SMC4-202ENST00000357388 SLC25A3Q00325 362 aa12.98□□□□□ -0.33
SMC4-202ENST00000357388 ACSM2AQ08AH3 577 aa12.98□□□□□ -0.33
SMC4-202ENST00000357388 BTG3Q14201 252 aaPredicted RBP12.98□□□□□ -0.33
SMC4-202ENST00000357388 ACSM2BQ68CK6 577 aa12.98□□□□□ -0.33
SMC4-202ENST00000357388 SPESP1Q6UW49 350 aa12.98□□□□□ -0.33
SMC4-202ENST00000357388 NT5DC3Q86UY8 548 aa12.98□□□□□ -0.33
SMC4-202ENST00000357388 ZNF655Q8N720 491 aaPredicted RBP12.98□□□□□ -0.33
SMC4-202ENST00000357388 TEFMQ96QE5 360 aaKnown RBP12.98□□□□□ -0.33
SMC4-202ENST00000357388 MCCC1Q96RQ3 725 aaPredicted RBP12.98□□□□□ -0.33
SMC4-202ENST00000357388 TLR10Q9BXR5 811 aa12.98□□□□□ -0.33
SMC4-202ENST00000357388 PNPLA8Q9NP80 782 aa12.98□□□□□ -0.33
SMC4-202ENST00000357388 CHST10O43529 356 aa12.97□□□□□ -0.33
SMC4-202ENST00000357388 FGFR2P21802 821 aa12.97□□□□□ -0.33
SMC4-202ENST00000357388 MGAT1P26572 445 aa12.97□□□□□ -0.33
SMC4-202ENST00000357388 ANTXR2P58335 489 aa12.97□□□□□ -0.33
SMC4-202ENST00000357388 ADAM17P78536 824 aa12.97□□□□□ -0.33
SMC4-202ENST00000357388 TBX2Q13207 712 aaPredicted RBP12.97□□□□□ -0.33
SMC4-202ENST00000357388 CYP2A13Q16696 494 aa12.97□□□□□ -0.33
SMC4-202ENST00000357388 LCN1P1Q5VSP4 162 aa12.97□□□□□ -0.33
SMC4-202ENST00000357388 C9orf131Q5VYM1 1079 aa12.97□□□□□ -0.33
SMC4-202ENST00000357388 TMEM176AQ96HP8 235 aa12.97□□□□□ -0.33
SMC4-202ENST00000357388 SNX6Q9UNH7 406 aa12.97□□□□□ -0.33
SMC4-202ENST00000357388 SCAF8Q9UPN6 1271 aaKnown RBP12.97□□□□□ -0.33
SMC4-202ENST00000357388 EFR3BQ9Y2G0 817 aa12.97□□□□□ -0.33
SMC4-202ENST00000357388 PRDM15P57071 1507 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms