RNA–Protein interactions for RNA: ENST00000355983.3

CCR9-201, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,653 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-201ENST00000355983 ATP13A4Q4VNC1 1196 aa7.8□□□□□ -1.16
CCR9-201ENST00000355983 CYBRD1Q53TN4 286 aa7.8□□□□□ -1.16
CCR9-201ENST00000355983 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.8□□□□□ -1.16
CCR9-201ENST00000355983 SUSD4Q5VX71 490 aa7.8□□□□□ -1.16
CCR9-201ENST00000355983 SLC9A4Q6AI14 798 aa7.8□□□□□ -1.16
CCR9-201ENST00000355983 LMOD2Q6P5Q4 547 aa7.8□□□□□ -1.16
CCR9-201ENST00000355983 SYCE2Q6PIF2 218 aa7.8□□□□□ -1.16
CCR9-201ENST00000355983 CRTC3Q6UUV7 619 aa7.8□□□□□ -1.16
CCR9-201ENST00000355983 UNC5AQ6ZN44 842 aa7.8□□□□□ -1.16
CCR9-201ENST00000355983 CDR2LQ86X02 465 aaPredicted RBP7.8□□□□□ -1.16
CCR9-201ENST00000355983 EPHX4Q8IUS5 362 aa7.8□□□□□ -1.16
CCR9-201ENST00000355983 ELMOD2Q8IZ81 293 aa7.8□□□□□ -1.16
CCR9-201ENST00000355983 CLIP4Q8N3C7 705 aa7.8□□□□□ -1.16
CCR9-201ENST00000355983 CBR4Q8N4T8 237 aa7.8□□□□□ -1.16
CCR9-201ENST00000355983 RDH11Q8TC12 318 aa7.8□□□□□ -1.16
CCR9-201ENST00000355983 TGFBRAP1Q8WUH2 860 aa7.8□□□□□ -1.16
CCR9-201ENST00000355983 OR52B2Q96RD2 323 aa7.8□□□□□ -1.16
CCR9-201ENST00000355983 EBNA1BP2Q99848 306 aaKnown RBP7.8□□□□□ -1.16
CCR9-201ENST00000355983 MKRN2Q9H000 416 aaKnown RBP7.8□□□□□ -1.16
CCR9-201ENST00000355983 LHPPQ9H008 270 aa7.8□□□□□ -1.16
CCR9-201ENST00000355983 C20orf96Q9NUD7 363 aaPredicted RBP7.8□□□□□ -1.16
CCR9-201ENST00000355983 SMPD3Q9NY59 655 aaPredicted RBP7.8□□□□□ -1.16
CCR9-201ENST00000355983 TMEM181Q9P2C4 612 aa7.8□□□□□ -1.16
CCR9-201ENST00000355983 ZNF221Q9UK13 617 aa7.8□□□□□ -1.16
CCR9-201ENST00000355983 PCDHGB1Q9Y5G3 927 aa7.8□□□□□ -1.16
CCR9-201ENST00000355983 CSPG5O95196 566 aa7.79□□□□□ -1.16
CCR9-201ENST00000355983 HSPA4LO95757 839 aa7.79□□□□□ -1.16
CCR9-201ENST00000355983 NDST3O95803 873 aa7.79□□□□□ -1.16
CCR9-201ENST00000355983 EGFRP00533 1210 aa7.79□□□□□ -1.16
CCR9-201ENST00000355983 ALDOAP04075 364 aaKnown RBP7.79□□□□□ -1.16
CCR9-201ENST00000355983 BMP4P12644 408 aa7.79□□□□□ -1.16
CCR9-201ENST00000355983 TCN1P20061 433 aaPredicted RBP7.79□□□□□ -1.16
CCR9-201ENST00000355983 TPSB2P20231 275 aa7.79□□□□□ -1.16
CCR9-201ENST00000355983 DNAJB1P25685 340 aa7.79□□□□□ -1.16
CCR9-201ENST00000355983 ZNF76P36508 570 aa7.79□□□□□ -1.16
CCR9-201ENST00000355983 PLA2G16P53816 162 aa7.79□□□□□ -1.16
CCR9-201ENST00000355983 GALK2Q01415 458 aa7.79□□□□□ -1.16
CCR9-201ENST00000355983 AQP6Q13520 282 aa7.79□□□□□ -1.16
CCR9-201ENST00000355983 DNASE1L3Q13609 305 aa7.79□□□□□ -1.16
CCR9-201ENST00000355983 PRKG1Q13976 671 aa7.79□□□□□ -1.16
CCR9-201ENST00000355983 NOMO1Q15155 1222 aa7.79□□□□□ -1.16
CCR9-201ENST00000355983 TPSAB1Q15661 275 aa7.79□□□□□ -1.16
CCR9-201ENST00000355983 CTF1Q16619 201 aa7.79□□□□□ -1.16
CCR9-201ENST00000355983 PRR16Q569H4 304 aa7.79□□□□□ -1.16
CCR9-201ENST00000355983 MROH9Q5TGP6 573 aa7.79□□□□□ -1.16
CCR9-201ENST00000355983 AGAP6Q5VW22 663 aa7.79□□□□□ -1.16
CCR9-201ENST00000355983 SEL1L3Q68CR1 1132 aa7.79□□□□□ -1.16
CCR9-201ENST00000355983 ZNF544Q6NX49 715 aa7.79□□□□□ -1.16
CCR9-201ENST00000355983 FKBP9P1Q75LS8 142 aa7.79□□□□□ -1.16
CCR9-201ENST00000355983 CAND1Q86VP6 1230 aaKnown RBP7.79□□□□□ -1.16
CCR9-201ENST00000355983 LYSMD2Q8IV50 215 aa7.79□□□□□ -1.16
CCR9-201ENST00000355983 SVOPQ8N4V2 548 aa7.79□□□□□ -1.16
CCR9-201ENST00000355983 RDH13Q8NBN7 331 aa7.79□□□□□ -1.16
CCR9-201ENST00000355983 SLC44A5Q8NCS7 719 aa7.79□□□□□ -1.16
CCR9-201ENST00000355983 FLAD1Q8NFF5 587 aa7.79□□□□□ -1.16
CCR9-201ENST00000355983 MAPK15Q8TD08 544 aa7.79□□□□□ -1.16
CCR9-201ENST00000355983 ZFP90Q8TF47 636 aa7.79□□□□□ -1.16
CCR9-201ENST00000355983 HDAC2Q92769 488 aaKnown RBP7.79□□□□□ -1.16
CCR9-201ENST00000355983 USP13Q92995 863 aaPredicted RBP7.79□□□□□ -1.16
CCR9-201ENST00000355983 DCPSQ96C86 337 aaKnown RBP7.79□□□□□ -1.16
CCR9-201ENST00000355983 ZNF560Q96MR9 790 aa7.79□□□□□ -1.16
CCR9-201ENST00000355983 DACH2Q96NX9 599 aa7.79□□□□□ -1.16
CCR9-201ENST00000355983 AGAP4Q96P64 663 aa7.79□□□□□ -1.16
CCR9-201ENST00000355983 ASB2Q96Q27 587 aa7.79□□□□□ -1.16
CCR9-201ENST00000355983 VPS35Q96QK1 796 aa7.79□□□□□ -1.16
CCR9-201ENST00000355983 TWNKQ96RR1 684 aa7.79□□□□□ -1.16
CCR9-201ENST00000355983 C11orf70Q9BRQ4 267 aa7.79□□□□□ -1.16
CCR9-201ENST00000355983 C2orf49Q9BVC5 232 aaPredicted RBP7.79□□□□□ -1.16
CCR9-201ENST00000355983 ZNF518BQ9C0D4 1074 aa7.79□□□□□ -1.16
CCR9-201ENST00000355983 MTMR12Q9C0I1 747 aa7.79□□□□□ -1.16
CCR9-201ENST00000355983 SPAG4Q9NPE6 437 aa7.79□□□□□ -1.16
CCR9-201ENST00000355983 ATP13A2Q9NQ11 1180 aa7.79□□□□□ -1.16
CCR9-201ENST00000355983 ZNF229Q9UJW7 825 aa7.79□□□□□ -1.16
CCR9-201ENST00000355983 NUP50Q9UKX7 468 aa7.79□□□□□ -1.16
CCR9-201ENST00000355983 ARHGAP33O14559 1287 aa7.79□□□□□ -1.16
CCR9-201ENST00000355983 MEIS2O14770 477 aa7.79□□□□□ -1.16
CCR9-201ENST00000355983 CFLARO15519 480 aa7.79□□□□□ -1.16
CCR9-201ENST00000355983 ZW10O43264 779 aa7.79□□□□□ -1.16
CCR9-201ENST00000355983 CST8O60676 142 aa7.79□□□□□ -1.16
CCR9-201ENST00000355983 APOA4P06727 396 aa7.79□□□□□ -1.16
CCR9-201ENST00000355983 ADRB2P07550 413 aa7.79□□□□□ -1.16
CCR9-201ENST00000355983 CKMT2P17540 419 aa7.79□□□□□ -1.16
CCR9-201ENST00000355983 KDELR1P24390 212 aa7.79□□□□□ -1.16
CCR9-201ENST00000355983 FASP25445 335 aa7.79□□□□□ -1.16
CCR9-201ENST00000355983 PRDX5P30044 214 aa7.79□□□□□ -1.16
CCR9-201ENST00000355983 HIBADHP31937 336 aaKnown RBP7.79□□□□□ -1.16
CCR9-201ENST00000355983 SLC16A2P36021 539 aa7.79□□□□□ -1.16
CCR9-201ENST00000355983 POLR2IP36954 125 aaKnown RBP7.79□□□□□ -1.16
CCR9-201ENST00000355983 DDOSTP39656 456 aa7.79□□□□□ -1.16
CCR9-201ENST00000355983 TUFMP49411 452 aaKnown RBP7.79□□□□□ -1.16
CCR9-201ENST00000355983 ALDH7A1P49419 539 aaKnown RBP7.79□□□□□ -1.16
CCR9-201ENST00000355983 ROR1Q01973 937 aa7.79□□□□□ -1.16
CCR9-201ENST00000355983 INPP5AQ14642 412 aa7.79□□□□□ -1.16
CCR9-201ENST00000355983 ZCCHC8Q6NZY4 707 aaKnown RBP7.79□□□□□ -1.16
CCR9-201ENST00000355983 RNF19BQ6ZMZ0 732 aa7.79□□□□□ -1.16
CCR9-201ENST00000355983 C15orf39Q6ZRI6 1047 aa7.79□□□□□ -1.16
CCR9-201ENST00000355983 SLCO6A1Q86UG4 719 aa7.79□□□□□ -1.16
CCR9-201ENST00000355983 DHFR2Q86XF0 187 aa7.79□□□□□ -1.16
CCR9-201ENST00000355983 ZNF781Q8N8C0 355 aa7.79□□□□□ -1.16
CCR9-201ENST00000355983 Q8N9G6 341 aaPredicted RBP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms