RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 NT5C1B-RDH14C9J2C7 533 aa13.37□□□□□ -0.27
SCN8A-202ENST00000355133 E7ENQ6 273 aa13.37□□□□□ -0.27
SCN8A-202ENST00000355133 IL1BP01584 269 aa13.37□□□□□ -0.27
SCN8A-202ENST00000355133 GOT1P17174 413 aa13.37□□□□□ -0.27
SCN8A-202ENST00000355133 CTPS1P17812 591 aa13.37□□□□□ -0.27
SCN8A-202ENST00000355133 C11orf88Q6PI97 169 aa13.37□□□□□ -0.27
SCN8A-202ENST00000355133 RBM23Q86U06 439 aaKnown RBP13.37□□□□□ -0.27
SCN8A-202ENST00000355133 ZNF557Q8N988 423 aaPredicted RBP13.37□□□□□ -0.27
SCN8A-202ENST00000355133 NETO2Q8NC67 525 aa13.37□□□□□ -0.27
SCN8A-202ENST00000355133 ATP13A3Q9H7F0 1226 aa13.37□□□□□ -0.27
SCN8A-202ENST00000355133 NRDE2Q9H7Z3 1164 aa13.37□□□□□ -0.27
SCN8A-202ENST00000355133 NDUFA13Q9P0J0 144 aa13.37□□□□□ -0.27
SCN8A-202ENST00000355133 CAPN1P07384 714 aa13.36□□□□□ -0.27
SCN8A-202ENST00000355133 FGFR3P22607 806 aa13.36□□□□□ -0.27
SCN8A-202ENST00000355133 HOXA10P31260 410 aaPredicted RBP13.36□□□□□ -0.27
SCN8A-202ENST00000355133 MAPK10P53779 464 aa13.36□□□□□ -0.27
SCN8A-202ENST00000355133 SKP1P63208 163 aa13.36□□□□□ -0.27
SCN8A-202ENST00000355133 USP41Q3LFD5 358 aa13.36□□□□□ -0.27
SCN8A-202ENST00000355133 FAM20CQ8IXL6 584 aa13.36□□□□□ -0.27
SCN8A-202ENST00000355133 EFCAB3Q8N7B9 438 aa13.36□□□□□ -0.27
SCN8A-202ENST00000355133 C12orf29Q8N999 325 aa13.36□□□□□ -0.27
SCN8A-202ENST00000355133 SEMA3CQ99985 751 aa13.36□□□□□ -0.27
SCN8A-202ENST00000355133 PEX11AO75192 247 aa13.36□□□□□ -0.27
SCN8A-202ENST00000355133 HLA-DQA2P01906 255 aa13.36□□□□□ -0.27
SCN8A-202ENST00000355133 PRKAR2AP13861 404 aaKnown RBP13.36□□□□□ -0.27
SCN8A-202ENST00000355133 CYP2C18P33260 490 aa13.36□□□□□ -0.27
SCN8A-202ENST00000355133 HK2P52789 917 aa13.36□□□□□ -0.27
SCN8A-202ENST00000355133 LPCAT2Q7L5N7 544 aa13.36□□□□□ -0.27
SCN8A-202ENST00000355133 C16orf62Q7Z3J2 963 aa13.36□□□□□ -0.27
SCN8A-202ENST00000355133 ZNF655Q8N720 491 aaPredicted RBP13.36□□□□□ -0.27
SCN8A-202ENST00000355133 OR5B17Q8NGF7 314 aa13.36□□□□□ -0.27
SCN8A-202ENST00000355133 STARD8Q92502 1023 aa13.36□□□□□ -0.27
SCN8A-202ENST00000355133 CXorf40BQ96DE9 158 aa13.36□□□□□ -0.27
SCN8A-202ENST00000355133 HSFY1Q96LI6 401 aa13.36□□□□□ -0.27
SCN8A-202ENST00000355133 LIASO43766 372 aa13.36□□□□□ -0.27
SCN8A-202ENST00000355133 GUCY1B2O75343 617 aa13.36□□□□□ -0.27
SCN8A-202ENST00000355133 CSH1P0DML2 217 aa13.36□□□□□ -0.27
SCN8A-202ENST00000355133 CSH2P0DML3 217 aa13.36□□□□□ -0.27
SCN8A-202ENST00000355133 TSPAN8P19075 237 aa13.36□□□□□ -0.27
SCN8A-202ENST00000355133 INHBEP58166 350 aa13.36□□□□□ -0.27
SCN8A-202ENST00000355133 GALNT3Q14435 633 aa13.36□□□□□ -0.27
SCN8A-202ENST00000355133 MEA1Q16626 185 aa13.36□□□□□ -0.27
SCN8A-202ENST00000355133 VGLL2Q8N8G2 317 aa13.36□□□□□ -0.27
SCN8A-202ENST00000355133 FAM45AQ8TCE6 357 aa13.36□□□□□ -0.27
SCN8A-202ENST00000355133 AENQ8WTP8 325 aaKnown RBP13.36□□□□□ -0.27
SCN8A-202ENST00000355133 MYOCQ99972 504 aa13.36□□□□□ -0.27
SCN8A-202ENST00000355133 SIKE1Q9BRV8 207 aa13.36□□□□□ -0.27
SCN8A-202ENST00000355133 RAD21L1Q9H4I0 556 aa13.36□□□□□ -0.27
SCN8A-202ENST00000355133 SMIM31A0A1B0GVY4 71 aa13.36□□□□□ -0.27
SCN8A-202ENST00000355133 MYL12BO14950 172 aa13.36□□□□□ -0.27
SCN8A-202ENST00000355133 SPATA31D3P0C874 917 aa13.36□□□□□ -0.27
SCN8A-202ENST00000355133 MYL12AP19105 171 aa13.36□□□□□ -0.27
SCN8A-202ENST00000355133 EPORP19235 508 aa13.36□□□□□ -0.27
SCN8A-202ENST00000355133 SLC34A1Q06495 639 aa13.36□□□□□ -0.27
SCN8A-202ENST00000355133 KRR1Q13601 381 aaKnown RBP13.36□□□□□ -0.27
SCN8A-202ENST00000355133 TSNQ15631 228 aaKnown RBP13.36□□□□□ -0.27
SCN8A-202ENST00000355133 SAMD4BQ5PRF9 694 aaKnown RBP13.36□□□□□ -0.27
SCN8A-202ENST00000355133 WASHC2DQ5SRD0 308 aa13.36□□□□□ -0.27
SCN8A-202ENST00000355133 SPATA31D4Q6ZUB0 917 aa13.36□□□□□ -0.27
SCN8A-202ENST00000355133 ZNF605Q86T29 641 aa13.36□□□□□ -0.27
SCN8A-202ENST00000355133 NKAPQ8N5F7 415 aaKnown RBP13.36□□□□□ -0.27
SCN8A-202ENST00000355133 ANKRD52Q8NB46 1076 aa13.36□□□□□ -0.27
SCN8A-202ENST00000355133 TRPM4Q8TD43 1214 aa13.36□□□□□ -0.27
SCN8A-202ENST00000355133 MIEF2Q96C03 454 aa13.36□□□□□ -0.27
SCN8A-202ENST00000355133 LRRC39Q96DD0 335 aa13.36□□□□□ -0.27
SCN8A-202ENST00000355133 RMND5BQ96G75 393 aaPredicted RBP13.36□□□□□ -0.27
SCN8A-202ENST00000355133 QRFPRQ96P65 431 aa13.36□□□□□ -0.27
SCN8A-202ENST00000355133 KLHL25Q9H0H3 589 aa13.36□□□□□ -0.27
SCN8A-202ENST00000355133 SLC12A4Q9UP95 1085 aa13.36□□□□□ -0.27
SCN8A-202ENST00000355133 C1orf232A0A0U1RR37 186 aa13.35□□□□□ -0.27
SCN8A-202ENST00000355133 HOXB8P17481 243 aaPredicted RBP13.35□□□□□ -0.27
SCN8A-202ENST00000355133 ABRQ12979 859 aa13.35□□□□□ -0.27
SCN8A-202ENST00000355133 ISLR2Q6UXK2 745 aa13.35□□□□□ -0.27
SCN8A-202ENST00000355133 SVOPQ8N4V2 548 aa13.35□□□□□ -0.27
SCN8A-202ENST00000355133 RNF157Q96PX1 679 aa13.35□□□□□ -0.27
SCN8A-202ENST00000355133 NR2E3Q9Y5X4 410 aa13.35□□□□□ -0.27
SCN8A-202ENST00000355133 RIMS1Q86UR5 1692 aaKnown RBP13.35□□□□□ -0.27
SCN8A-202ENST00000355133 LBPP18428 481 aa13.35□□□□□ -0.27
SCN8A-202ENST00000355133 ATP4AP20648 1035 aa13.35□□□□□ -0.27
SCN8A-202ENST00000355133 TKTP29401 623 aaKnown RBP13.35□□□□□ -0.27
SCN8A-202ENST00000355133 RPL22P35268 128 aaKnown RBP13.35□□□□□ -0.27
SCN8A-202ENST00000355133 CHKAP35790 457 aa13.35□□□□□ -0.27
SCN8A-202ENST00000355133 IFNGR2P38484 337 aa13.35□□□□□ -0.27
SCN8A-202ENST00000355133 RXRGP48443 463 aa13.35□□□□□ -0.27
SCN8A-202ENST00000355133 TAF13Q15543 124 aa13.35□□□□□ -0.27
SCN8A-202ENST00000355133 FAM187BQ17R55 369 aa13.35□□□□□ -0.27
SCN8A-202ENST00000355133 AFTPHQ6ULP2 937 aa13.35□□□□□ -0.27
SCN8A-202ENST00000355133 PLPPR4Q7Z2D5 763 aa13.35□□□□□ -0.27
SCN8A-202ENST00000355133 SPATA6LQ8N4H0 392 aa13.35□□□□□ -0.27
SCN8A-202ENST00000355133 DNAJC1Q96KC8 554 aaKnown RBP13.35□□□□□ -0.27
SCN8A-202ENST00000355133 ARHGEF3Q9NR81 526 aa13.35□□□□□ -0.27
SCN8A-202ENST00000355133 AASDHPPTQ9NRN7 309 aa13.35□□□□□ -0.27
SCN8A-202ENST00000355133 RABGEF1Q9UJ41 708 aa13.35□□□□□ -0.27
SCN8A-202ENST00000355133 SNX6Q9UNH7 406 aa13.35□□□□□ -0.27
SCN8A-202ENST00000355133 LYVE1Q9Y5Y7 322 aa13.35□□□□□ -0.27
SCN8A-202ENST00000355133 C1QTNF3-AMACRE9PGA6 284 aa13.35□□□□□ -0.27
SCN8A-202ENST00000355133 PSMD5Q16401 504 aa13.35□□□□□ -0.27
SCN8A-202ENST00000355133 UGCGQ16739 394 aa13.35□□□□□ -0.27
SCN8A-202ENST00000355133 CNSTQ6PJW8 725 aa13.35□□□□□ -0.27
SCN8A-202ENST00000355133 TSEN2Q8NCE0 465 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms