RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 FAM160B2Q86V87 743 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 TMEM200AQ86VY9 491 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 ARHGAP12Q8IWW6 846 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 KRT35Q92764 455 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 RFKQ969G6 155 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 JAKMIP2Q96AA8 810 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 ZNF668Q96K58 619 aaPredicted RBP1.73□□□□□ -2.13
BRCA1-202ENST00000354071 C1QTNF5Q9BXJ0 243 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 DBNDD1Q9H9R9 158 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 MLXIPLQ9NP71 852 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 SLC6A13Q9NSD5 602 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 SLC25A13Q9UJS0 675 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 ZFP37Q9Y6Q3 630 aaPredicted RBP1.73□□□□□ -2.13
BRCA1-202ENST00000354071 IFT140Q96RY7 1462 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 PBRM1Q86U86 1689 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 ADGRA2Q96PE1 1338 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 C3P01024 1663 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 H0Y626 953 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 IPO8O15397 1037 aaKnown RBP1.72□□□□□ -2.13
BRCA1-202ENST00000354071 GUCY1B2O75343 617 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 SPDEFO95238 335 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 NDUFA10O95299 355 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 BCL10O95999 233 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 MT-ND3P03897 115 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 C1QTNF9P0C862 333 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 CYP11B2P19099 503 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 AGAP20933 346 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 TXKP42681 527 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 PIP4K2AP48426 406 aaPredicted RBP1.72□□□□□ -2.13
BRCA1-202ENST00000354071 COPB1P53618 953 aaKnown RBP1.72□□□□□ -2.13
BRCA1-202ENST00000354071 ADORA2A-AS1P86434 159 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 PLIN5Q00G26 463 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 TP53BP2Q13625 1128 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 ALKBH1Q13686 389 aaKnown RBP1.72□□□□□ -2.13
BRCA1-202ENST00000354071 COG2Q14746 738 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 ME3Q16798 604 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 NT5DC1Q5TFE4 455 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 NDUFAF2Q8N183 169 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 NUP93Q8N1F7 819 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 DDX51Q8N8A6 666 aaKnown RBP eCLIP1.72□□□□□ -2.13
BRCA1-202ENST00000354071 MOSPD2Q8NHP6 518 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 KAT2AQ92830 837 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 MIEF2Q96C03 454 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 TBC1D31Q96DN5 1066 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 CDHR1Q96JP9 859 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 DCLRE1CQ96SD1 692 aaKnown RBP1.72□□□□□ -2.13
BRCA1-202ENST00000354071 IFIH1Q9BYX4 1025 aaKnown RBP1.72□□□□□ -2.13
BRCA1-202ENST00000354071 PLK3Q9H4B4 646 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 Q9N2J8 555 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 PAG1Q9NWQ8 432 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 CPSF2Q9P2I0 782 aaKnown RBP1.72□□□□□ -2.13
BRCA1-202ENST00000354071 MGAT4CQ9UBM8 478 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 PLEKHB1Q9UF11 243 aaPredicted RBP1.72□□□□□ -2.13
BRCA1-202ENST00000354071 ST3GAL5Q9UNP4 418 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 KCTD3Q9Y597 815 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 FPGT-TNNI3KV9GXZ4 949 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 ARID1BQ8NFD5 2236 aaPredicted RBP1.72□□□□□ -2.13
BRCA1-202ENST00000354071 TEX14Q8IWB6 1497 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 CDH23Q9H251 3354 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 MYADML2A6NDP7 307 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 CXorf65A6NEN9 183 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 SAC3D1A6NKF1 404 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 CAPN14A8MX76 684 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 NOBOXO60393 691 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 TSPAN9O75954 239 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 RFPL3SP0C7P2 107 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 FCGR2AP12318 317 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 COX7A2P14406 83 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 FMO4P31512 558 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 BUD31P41223 144 aaPredicted RBP1.72□□□□□ -2.13
BRCA1-202ENST00000354071 TMPRSS3P57727 454 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 WDR5P61964 334 aaKnown RBP1.72□□□□□ -2.13
BRCA1-202ENST00000354071 MRPS5P82675 430 aaKnown RBP1.72□□□□□ -2.13
BRCA1-202ENST00000354071 CALD1Q05682 793 aaKnown RBP1.72□□□□□ -2.13
BRCA1-202ENST00000354071 DMWDQ09019 674 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 WASHC5Q12768 1159 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 PPA1Q15181 289 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 KRT74Q7RTS7 529 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 TRIM74Q86UV6 250 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 TRIM73Q86UV7 250 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 HAPLN4Q86UW8 402 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 TMPRSS6Q8IU80 811 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 APPL2Q8NEU8 664 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 LILRB1Q8NHL6 650 aaPredicted RBP1.72□□□□□ -2.13
BRCA1-202ENST00000354071 ZCCHC10Q8TBK6 192 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 ATP2A3Q93084 1043 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 ADAD1Q96M93 576 aaKnown RBP1.72□□□□□ -2.13
BRCA1-202ENST00000354071 WWC2-AS2Q96NR7 200 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 DGAT2Q96PD7 388 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 INTS14Q96SY0 518 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 MMS19Q96T76 1030 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 CD180Q99467 661 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 SYNPO2LQ9H987 977 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 RRP7BPQ9NSQ0 103 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 ASNSD1Q9NWL6 643 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 PPP4R1LQ9P1A2 415 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 ABI3Q9P2A4 366 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 ANAPC5Q9UJX4 755 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 CNOT6Q9ULM6 557 aaKnown RBP1.72□□□□□ -2.13
BRCA1-202ENST00000354071 PKP3Q9Y446 797 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms